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MS023135 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS023135
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionFRIGIDA interacting protein 1
Genome locationscaffold78:382641..382736
RNA-Seq ExpressionMS023135
SyntenyMS023135
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8653456.1 hypothetical protein Csa_007539 [Cucumis sativus]2.2e-0793.75Show/hide
Query:  RYHDVGRLSDQQMALLQYQRENLHFLNEEVYR
        RYHDVGRLSDQQMALLQYQRENLHFLNEE+ R
Subjt:  RYHDVGRLSDQQMALLQYQRENLHFLNEEVYR

KAG7021969.1 Transmembrane protein [Cucurbita argyrosperma subsp. argyrosperma]2.2e-0793.75Show/hide
Query:  RYHDVGRLSDQQMALLQYQRENLHFLNEEVYR
        RYHDVGRLSDQQMALLQYQRENLHFLNEE+ R
Subjt:  RYHDVGRLSDQQMALLQYQRENLHFLNEEVYR

KAG7023699.1 Transmembrane protein [Cucurbita argyrosperma subsp. argyrosperma]2.2e-0793.75Show/hide
Query:  RYHDVGRLSDQQMALLQYQRENLHFLNEEVYR
        RYHDVGRLSDQQMALLQYQRENLHFLNEE+ R
Subjt:  RYHDVGRLSDQQMALLQYQRENLHFLNEEVYR

TYK10025.1 uncharacterized protein E5676_scaffold16G001570 [Cucumis melo var. makuwa]2.2e-0793.75Show/hide
Query:  RYHDVGRLSDQQMALLQYQRENLHFLNEEVYR
        RYHDVGRLSDQQMALLQYQRENLHFLNEE+ R
Subjt:  RYHDVGRLSDQQMALLQYQRENLHFLNEEVYR

XP_022967730.1 uncharacterized protein LOC111467166 isoform X1 [Cucurbita maxima]2.2e-0793.75Show/hide
Query:  RYHDVGRLSDQQMALLQYQRENLHFLNEEVYR
        RYHDVGRLSDQQMALLQYQRENLHFLNEE+ R
Subjt:  RYHDVGRLSDQQMALLQYQRENLHFLNEEVYR

TrEMBL top hitse value%identityAlignment
A0A6J1HBP9 uncharacterized protein LOC111461818 isoform X11.1e-0793.75Show/hide
Query:  RYHDVGRLSDQQMALLQYQRENLHFLNEEVYR
        RYHDVGRLSDQQMALLQYQRENLHFLNEE+ R
Subjt:  RYHDVGRLSDQQMALLQYQRENLHFLNEEVYR

A0A6J1HRN0 uncharacterized protein LOC111467166 isoform X21.1e-0793.75Show/hide
Query:  RYHDVGRLSDQQMALLQYQRENLHFLNEEVYR
        RYHDVGRLSDQQMALLQYQRENLHFLNEE+ R
Subjt:  RYHDVGRLSDQQMALLQYQRENLHFLNEEVYR

A0A6J1HVA3 uncharacterized protein LOC111467166 isoform X11.1e-0793.75Show/hide
Query:  RYHDVGRLSDQQMALLQYQRENLHFLNEEVYR
        RYHDVGRLSDQQMALLQYQRENLHFLNEE+ R
Subjt:  RYHDVGRLSDQQMALLQYQRENLHFLNEEVYR

A0A6J1JCN1 uncharacterized protein LOC111485584 isoform X21.1e-0793.75Show/hide
Query:  RYHDVGRLSDQQMALLQYQRENLHFLNEEVYR
        RYHDVGRLSDQQMALLQYQRENLHFLNEE+ R
Subjt:  RYHDVGRLSDQQMALLQYQRENLHFLNEEVYR

A0A6J1JJ60 uncharacterized protein LOC111485584 isoform X11.1e-0793.75Show/hide
Query:  RYHDVGRLSDQQMALLQYQRENLHFLNEEVYR
        RYHDVGRLSDQQMALLQYQRENLHFLNEE+ R
Subjt:  RYHDVGRLSDQQMALLQYQRENLHFLNEEVYR

SwissProt top hitse value%identityAlignment
Q8S8K9 Protein FIP12.8e-0588Show/hide
Query:  GRLSDQQMALLQYQRENLHFLNEEV
        GRLSDQQ ALLQYQRENLHFL+EE+
Subjt:  GRLSDQQMALLQYQRENLHFLNEEV

Arabidopsis top hitse value%identityAlignment
AT2G06005.1 FRIGIDA interacting protein 12.0e-0688Show/hide
Query:  GRLSDQQMALLQYQRENLHFLNEEV
        GRLSDQQ ALLQYQRENLHFL+EE+
Subjt:  GRLSDQQMALLQYQRENLHFLNEEV

AT2G06005.2 FRIGIDA interacting protein 12.0e-0688Show/hide
Query:  GRLSDQQMALLQYQRENLHFLNEEV
        GRLSDQQ ALLQYQRENLHFL+EE+
Subjt:  GRLSDQQMALLQYQRENLHFLNEEV

AT5G20580.1 BEST Arabidopsis thaliana protein match is: FRIGIDA interacting protein 1 (TAIR:AT2G06005.1)1.4e-0981.25Show/hide
Query:  RYHDVGRLSDQQMALLQYQRENLHFLNEEVYR
        RYH+ GRLSDQQMALLQYQRENLH+L+EE+ R
Subjt:  RYHDVGRLSDQQMALLQYQRENLHFLNEEVYR

AT5G20580.2 BEST Arabidopsis thaliana protein match is: FRIGIDA interacting protein 1 (TAIR:AT2G06005.1)1.4e-0981.25Show/hide
Query:  RYHDVGRLSDQQMALLQYQRENLHFLNEEVYR
        RYH+ GRLSDQQMALLQYQRENLH+L+EE+ R
Subjt:  RYHDVGRLSDQQMALLQYQRENLHFLNEEVYR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGGTATCACGATGTTGGTCGACTTTCTGATCAGCAAATGGCTCTGTTGCAATACCAGCGAGAGAATCTTCATTTTCTGAATGAAGAGGTATACCGT
mRNA sequenceShow/hide mRNA sequence
AGGTATCACGATGTTGGTCGACTTTCTGATCAGCAAATGGCTCTGTTGCAATACCAGCGAGAGAATCTTCATTTTCTGAATGAAGAGGTATACCGT
Protein sequenceShow/hide protein sequence
RYHDVGRLSDQQMALLQYQRENLHFLNEEVYR