; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS023150 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS023150
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationscaffold78:477118..478020
RNA-Seq ExpressionMS023150
SyntenyMS023150
Gene Ontology termsGO:0009416 - response to light stimulus (biological process)
GO:0009768 - photosynthesis, light harvesting in photosystem I (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0009523 - photosystem II (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0016168 - chlorophyll binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001344 - Chlorophyll A-B binding protein, plant and chromista
IPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588096.1 Photosystem I chlorophyll a/b-binding protein 6, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]9.2e-13593.03Show/hide
Query:  SHTRH----FPGKFTKH-LRRDYSHLNAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGI
        SH+ H    FPGKF K+ LRR  +HLNAAKSGVSSVCEPLPPDRPLWFPGS+PPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGI
Subjt:  SHTRH----FPGKFTKH-LRRDYSHLNAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGI

Query:  LLPEWFESLGLIENFSWYDAGTREYFADPTTLLVAQLGLMGWAEGRRWADMVNPGSVDVDLKLPHKKKPAPDVGYPGGFWFDPMMWGRGSPEPVMVLRTK
        LLPEWFESLGLI NFSWYDAGTREYFADPTTLLVAQLGLMGW EGRRWADMVNPGSVDVDLKLPHKKKP PDVGYPGGFWFDPMMWGRGSPEPVMVLRTK
Subjt:  LLPEWFESLGLIENFSWYDAGTREYFADPTTLLVAQLGLMGWAEGRRWADMVNPGSVDVDLKLPHKKKPAPDVGYPGGFWFDPMMWGRGSPEPVMVLRTK

Query:  EIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHLADPGHCNIFS
        EIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAH+ADPGHCNIFS
Subjt:  EIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHLADPGHCNIFS

KAG7021985.1 Photosystem I chlorophyll a/b-binding protein 6, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]5.4e-13593.03Show/hide
Query:  SHTRH----FPGKFTKH-LRRDYSHLNAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGI
        SH+ H    FPGKF K+ LRR  +HLNAAKSGVSSVCEPLPPDRPLWFPGS+PPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGI
Subjt:  SHTRH----FPGKFTKH-LRRDYSHLNAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGI

Query:  LLPEWFESLGLIENFSWYDAGTREYFADPTTLLVAQLGLMGWAEGRRWADMVNPGSVDVDLKLPHKKKPAPDVGYPGGFWFDPMMWGRGSPEPVMVLRTK
        LLPEWFESLGLI+NFSWYDAGTREYFADPTTLLVAQLGLMGW EGRRWADMVNPGSVDVDLKLPHKKKP PDVGYPGGFWFDPMMWGRGSPEPVMVLRTK
Subjt:  LLPEWFESLGLIENFSWYDAGTREYFADPTTLLVAQLGLMGWAEGRRWADMVNPGSVDVDLKLPHKKKPAPDVGYPGGFWFDPMMWGRGSPEPVMVLRTK

Query:  EIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHLADPGHCNIFS
        EIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAH+ADPGHCNIFS
Subjt:  EIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHLADPGHCNIFS

XP_022147671.1 photosystem I chlorophyll a/b-binding protein 6, chloroplastic [Momordica charantia]9.8e-145100Show/hide
Query:  SHTRHFPGKFTKHLRRDYSHLNAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEW
        SHTRHFPGKFTKHLRRDYSHLNAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEW
Subjt:  SHTRHFPGKFTKHLRRDYSHLNAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEW

Query:  FESLGLIENFSWYDAGTREYFADPTTLLVAQLGLMGWAEGRRWADMVNPGSVDVDLKLPHKKKPAPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNG
        FESLGLIENFSWYDAGTREYFADPTTLLVAQLGLMGWAEGRRWADMVNPGSVDVDLKLPHKKKPAPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNG
Subjt:  FESLGLIENFSWYDAGTREYFADPTTLLVAQLGLMGWAEGRRWADMVNPGSVDVDLKLPHKKKPAPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNG

Query:  RLAMLAFVGLWFQAIYTGQGPLENLAAHLADPGHCNIFS
        RLAMLAFVGLWFQAIYTGQGPLENLAAHLADPGHCNIFS
Subjt:  RLAMLAFVGLWFQAIYTGQGPLENLAAHLADPGHCNIFS

XP_022929235.1 photosystem I chlorophyll a/b-binding protein 6, chloroplastic isoform X1 [Cucurbita moschata]5.4e-13593.03Show/hide
Query:  SHTRH----FPGKFTKH-LRRDYSHLNAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGI
        SH+ H    FPGKF K+ LRR  +HLNAAKSGVSSVCEPLPPDRPLWFPGS+PPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGI
Subjt:  SHTRH----FPGKFTKH-LRRDYSHLNAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGI

Query:  LLPEWFESLGLIENFSWYDAGTREYFADPTTLLVAQLGLMGWAEGRRWADMVNPGSVDVDLKLPHKKKPAPDVGYPGGFWFDPMMWGRGSPEPVMVLRTK
        LLPEWFESLGLI+NFSWYDAGTREYFADPTTLLVAQLGLMGW EGRRWADMVNPGSVDVDLKLPHKKKP PDVGYPGGFWFDPMMWGRGSPEPVMVLRTK
Subjt:  LLPEWFESLGLIENFSWYDAGTREYFADPTTLLVAQLGLMGWAEGRRWADMVNPGSVDVDLKLPHKKKPAPDVGYPGGFWFDPMMWGRGSPEPVMVLRTK

Query:  EIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHLADPGHCNIFS
        EIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAH+ADPGHCNIFS
Subjt:  EIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHLADPGHCNIFS

XP_022929243.1 photosystem I chlorophyll a/b-binding protein 6, chloroplastic isoform X2 [Cucurbita moschata]5.4e-13593.03Show/hide
Query:  SHTRH----FPGKFTKH-LRRDYSHLNAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGI
        SH+ H    FPGKF K+ LRR  +HLNAAKSGVSSVCEPLPPDRPLWFPGS+PPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGI
Subjt:  SHTRH----FPGKFTKH-LRRDYSHLNAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGI

Query:  LLPEWFESLGLIENFSWYDAGTREYFADPTTLLVAQLGLMGWAEGRRWADMVNPGSVDVDLKLPHKKKPAPDVGYPGGFWFDPMMWGRGSPEPVMVLRTK
        LLPEWFESLGLI+NFSWYDAGTREYFADPTTLLVAQLGLMGW EGRRWADMVNPGSVDVDLKLPHKKKP PDVGYPGGFWFDPMMWGRGSPEPVMVLRTK
Subjt:  LLPEWFESLGLIENFSWYDAGTREYFADPTTLLVAQLGLMGWAEGRRWADMVNPGSVDVDLKLPHKKKPAPDVGYPGGFWFDPMMWGRGSPEPVMVLRTK

Query:  EIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHLADPGHCNIFS
        EIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAH+ADPGHCNIFS
Subjt:  EIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHLADPGHCNIFS

TrEMBL top hitse value%identityAlignment
A0A6J1D327 Chlorophyll a-b binding protein, chloroplastic4.7e-145100Show/hide
Query:  SHTRHFPGKFTKHLRRDYSHLNAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEW
        SHTRHFPGKFTKHLRRDYSHLNAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEW
Subjt:  SHTRHFPGKFTKHLRRDYSHLNAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEW

Query:  FESLGLIENFSWYDAGTREYFADPTTLLVAQLGLMGWAEGRRWADMVNPGSVDVDLKLPHKKKPAPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNG
        FESLGLIENFSWYDAGTREYFADPTTLLVAQLGLMGWAEGRRWADMVNPGSVDVDLKLPHKKKPAPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNG
Subjt:  FESLGLIENFSWYDAGTREYFADPTTLLVAQLGLMGWAEGRRWADMVNPGSVDVDLKLPHKKKPAPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNG

Query:  RLAMLAFVGLWFQAIYTGQGPLENLAAHLADPGHCNIFS
        RLAMLAFVGLWFQAIYTGQGPLENLAAHLADPGHCNIFS
Subjt:  RLAMLAFVGLWFQAIYTGQGPLENLAAHLADPGHCNIFS

A0A6J1ERI7 Chlorophyll a-b binding protein, chloroplastic2.6e-13593.03Show/hide
Query:  SHTRH----FPGKFTKH-LRRDYSHLNAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGI
        SH+ H    FPGKF K+ LRR  +HLNAAKSGVSSVCEPLPPDRPLWFPGS+PPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGI
Subjt:  SHTRH----FPGKFTKH-LRRDYSHLNAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGI

Query:  LLPEWFESLGLIENFSWYDAGTREYFADPTTLLVAQLGLMGWAEGRRWADMVNPGSVDVDLKLPHKKKPAPDVGYPGGFWFDPMMWGRGSPEPVMVLRTK
        LLPEWFESLGLI+NFSWYDAGTREYFADPTTLLVAQLGLMGW EGRRWADMVNPGSVDVDLKLPHKKKP PDVGYPGGFWFDPMMWGRGSPEPVMVLRTK
Subjt:  LLPEWFESLGLIENFSWYDAGTREYFADPTTLLVAQLGLMGWAEGRRWADMVNPGSVDVDLKLPHKKKPAPDVGYPGGFWFDPMMWGRGSPEPVMVLRTK

Query:  EIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHLADPGHCNIFS
        EIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAH+ADPGHCNIFS
Subjt:  EIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHLADPGHCNIFS

A0A6J1ETS8 Chlorophyll a-b binding protein, chloroplastic2.6e-13593.03Show/hide
Query:  SHTRH----FPGKFTKH-LRRDYSHLNAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGI
        SH+ H    FPGKF K+ LRR  +HLNAAKSGVSSVCEPLPPDRPLWFPGS+PPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGI
Subjt:  SHTRH----FPGKFTKH-LRRDYSHLNAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGI

Query:  LLPEWFESLGLIENFSWYDAGTREYFADPTTLLVAQLGLMGWAEGRRWADMVNPGSVDVDLKLPHKKKPAPDVGYPGGFWFDPMMWGRGSPEPVMVLRTK
        LLPEWFESLGLI+NFSWYDAGTREYFADPTTLLVAQLGLMGW EGRRWADMVNPGSVDVDLKLPHKKKP PDVGYPGGFWFDPMMWGRGSPEPVMVLRTK
Subjt:  LLPEWFESLGLIENFSWYDAGTREYFADPTTLLVAQLGLMGWAEGRRWADMVNPGSVDVDLKLPHKKKPAPDVGYPGGFWFDPMMWGRGSPEPVMVLRTK

Query:  EIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHLADPGHCNIFS
        EIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAH+ADPGHCNIFS
Subjt:  EIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHLADPGHCNIFS

A0A6J1HS79 Chlorophyll a-b binding protein, chloroplastic9.9e-13594.92Show/hide
Query:  HFPGKFTKH-LRRDYSHLNAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEWFES
        +FPGKF K+ LRR  SHLNAAKSGVSSVCEPLPPDRPLWFPGS+PPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEWFES
Subjt:  HFPGKFTKH-LRRDYSHLNAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEWFES

Query:  LGLIENFSWYDAGTREYFADPTTLLVAQLGLMGWAEGRRWADMVNPGSVDVDLKLPHKKKPAPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLA
        LGLI+NFSWYDAGTREYFADPTTLLVAQLGLMGW EGRRWADMVNPG VDVDLKLPHKKKP PDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLA
Subjt:  LGLIENFSWYDAGTREYFADPTTLLVAQLGLMGWAEGRRWADMVNPGSVDVDLKLPHKKKPAPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLA

Query:  MLAFVGLWFQAIYTGQGPLENLAAHLADPGHCNIFS
        MLAFVGLWFQAIYTGQGPLENLAAH+ADPGHCNIFS
Subjt:  MLAFVGLWFQAIYTGQGPLENLAAHLADPGHCNIFS

A0A6J1HWP6 Chlorophyll a-b binding protein, chloroplastic9.9e-13594.92Show/hide
Query:  HFPGKFTKH-LRRDYSHLNAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEWFES
        +FPGKF K+ LRR  SHLNAAKSGVSSVCEPLPPDRPLWFPGS+PPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEWFES
Subjt:  HFPGKFTKH-LRRDYSHLNAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEWFES

Query:  LGLIENFSWYDAGTREYFADPTTLLVAQLGLMGWAEGRRWADMVNPGSVDVDLKLPHKKKPAPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLA
        LGLI+NFSWYDAGTREYFADPTTLLVAQLGLMGW EGRRWADMVNPG VDVDLKLPHKKKP PDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLA
Subjt:  LGLIENFSWYDAGTREYFADPTTLLVAQLGLMGWAEGRRWADMVNPGSVDVDLKLPHKKKPAPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLA

Query:  MLAFVGLWFQAIYTGQGPLENLAAHLADPGHCNIFS
        MLAFVGLWFQAIYTGQGPLENLAAH+ADPGHCNIFS
Subjt:  MLAFVGLWFQAIYTGQGPLENLAAHLADPGHCNIFS

SwissProt top hitse value%identityAlignment
P10708 Chlorophyll a-b binding protein 7, chloroplastic5.3e-8563.06Show/hide
Query:  YSHLNAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIENFSWYDAGT
        YS    A+S  ++VC    PDRPLWFPGS+PP WLDGSLPGDFGFDPLGL SDPE L+W  QAEL+H RWAML  AGI +PE    +G++   SWY AG 
Subjt:  YSHLNAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIENFSWYDAGT

Query:  REYFADPTTLLVAQLGLMGWAEGRRWADMVNPGSVDVDLKLPHKKKPAPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYT
        +EYF D TTL + +L L+GWAEGRRWAD++ PG V+ D   P+ K    DVGYPGG WFDP+ WG GSP  +  LRTKEIKNGRLAMLA +G WFQ IYT
Subjt:  REYFADPTTLLVAQLGLMGWAEGRRWADMVNPGSVDVDLKLPHKKKPAPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYT

Query:  GQGPLENLAAHLADPGHCNIFS
        G GP++NL AHLADPGH  IF+
Subjt:  GQGPLENLAAHLADPGHCNIFS

P13869 Chlorophyll a-b binding protein, chloroplastic8.2e-8668.47Show/hide
Query:  PDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIENFSWYDAGTREYFADPTTLLVAQLGLMG
        PDRPLWFPGS+PPEWLDGSLPGDFGFDPLGLGSDPE LKW AQAEL+H+RWAML  AGI +PE+   +G++   SWY AG +EYF D TTL V +L L+G
Subjt:  PDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIENFSWYDAGTREYFADPTTLLVAQLGLMG

Query:  WAEGRRWADMVNPGSVDVDLKLPHKKKPAPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHLADPGHCN
        WAEGRRWAD++ PG V+ D   P+ K    DVGYPGG WFDP+ WG GSP  +  LRTKEIKNGRLAMLA +G WFQ IYTG GP++NL AHLADPGH  
Subjt:  WAEGRRWADMVNPGSVDVDLKLPHKKKPAPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHLADPGHCN

Query:  IFS
        IF+
Subjt:  IFS

P27521 Chlorophyll a-b binding protein 4, chloroplastic7.0e-5348.21Show/hide
Query:  LRRDYSHLNAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIENFSWY
        L RD S  +   S  +S  + +   +  W PG + P++L GSL GD GFDPLGL  DPE LKWF QAEL++ RWAML VAG+LLPE F  +G+I    WY
Subjt:  LRRDYSHLNAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIENFSWY

Query:  DAGTREYFADPTTLLVAQLGLMGWAEGRRWADMVNPGSVDVDLKLPHKKKPAPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQ
        DAG  +YFA  +TL V +  L  + E RRW D+ NPGSV+ D        P  +VGYPGG  F+P+ +      P    + KE+ NGRLAMLAF+G   Q
Subjt:  DAGTREYFADPTTLLVAQLGLMGWAEGRRWADMVNPGSVDVDLKLPHKKKPAPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQ

Query:  AIYTGQGPLENLAAHLADPGHCNI
           TG+GP ENL  HL+DP H  I
Subjt:  AIYTGQGPLENLAAHLADPGHCNI

Q8LCQ4 Photosystem I chlorophyll a/b-binding protein 6, chloroplastic5.3e-10982.55Show/hide
Query:  VSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIENFSWYDAGTREYFADPTTL
        VSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDP+ LKWFAQAEL+H+RWAMLAV GI++PE  E LG IENFSWYDAG+REYFAD TTL
Subjt:  VSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIENFSWYDAGTREYFADPTTL

Query:  LVAQLGLMGWAEGRRWADMVNPGSVDVDLKLPHKKKPAPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAA
         VAQ+ LMGWAEGRRWAD++ PGSVD++ K PHK  P PDVGYPGG WFD MMWGRGSPEPVMVLRTKEIKNGRLAMLAF+G  FQA YT Q P+ENL A
Subjt:  LVAQLGLMGWAEGRRWADMVNPGSVDVDLKLPHKKKPAPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAA

Query:  HLADPGHCNIFS
        HLADPGHCN+FS
Subjt:  HLADPGHCNIFS

Q9SYW8 Photosystem I chlorophyll a/b-binding protein 2, chloroplastic2.6e-8466.5Show/hide
Query:  PDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIENFSWYDAGTREYFADPTTLLVAQLGLMG
        PDRP+WFPGS+PPEWLDGSLPGDFGFDPLGL SDP+ LKW  QAE++H RWAML  AGI +PE+   +G++   SWY AG +EYF D TTL V +L L+G
Subjt:  PDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIENFSWYDAGTREYFADPTTLLVAQLGLMG

Query:  WAEGRRWADMVNPGSVDVDLKLPHKKKPAPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHLADPGHCN
        WAEGRRWAD++ PGSV+ D   P+ K    DVGYPGG WFDP+ WG GSP  +  LRTKEIKNGRLAMLA +G WFQ IYTG GP++NL AHLADPGH  
Subjt:  WAEGRRWADMVNPGSVDVDLKLPHKKKPAPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHLADPGHCN

Query:  IFS
        IF+
Subjt:  IFS

Arabidopsis top hitse value%identityAlignment
AT1G19150.1 photosystem I light harvesting complex gene 63.7e-11082.55Show/hide
Query:  VSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIENFSWYDAGTREYFADPTTL
        VSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDP+ LKWFAQAEL+H+RWAMLAV GI++PE  E LG IENFSWYDAG+REYFAD TTL
Subjt:  VSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIENFSWYDAGTREYFADPTTL

Query:  LVAQLGLMGWAEGRRWADMVNPGSVDVDLKLPHKKKPAPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAA
         VAQ+ LMGWAEGRRWAD++ PGSVD++ K PHK  P PDVGYPGG WFD MMWGRGSPEPVMVLRTKEIKNGRLAMLAF+G  FQA YT Q P+ENL A
Subjt:  LVAQLGLMGWAEGRRWADMVNPGSVDVDLKLPHKKKPAPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAA

Query:  HLADPGHCNIFS
        HLADPGHCN+FS
Subjt:  HLADPGHCNIFS

AT1G45474.1 photosystem I light harvesting complex gene 51.7e-4642.31Show/hide
Query:  HLRRDYS-----HLNAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEWFESLGLI
        H RRD S      +++ K+    +   +  +R  W PG +PP +LDG+L GD+GFDPLGLG DPE LKW+ QAEL+H+R+AML VAGIL  +   + G+ 
Subjt:  HLRRDYS-----HLNAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEWFESLGLI

Query:  ENFSWYDAGTREY-FADPTTLLVAQLGLMGWAEGRRWADMVNPGSVDVDLKLPHKKKPA---PDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLA
            WY+AG  ++ FA   TL+V Q  LMG+AE +R+ D V+PGS   +       + A    + GYPGG   +P+   +   +     + KEIKNGRLA
Subjt:  ENFSWYDAGTREY-FADPTTLLVAQLGLMGWAEGRRWADMVNPGSVDVDLKLPHKKKPA---PDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLA

Query:  MLAFVGLWFQAIYTGQGPLENLAAHLADPGHCNI
        M+A +G + QA  T  GP++NL  HL++P H  I
Subjt:  MLAFVGLWFQAIYTGQGPLENLAAHLADPGHCNI

AT1G45474.2 photosystem I light harvesting complex gene 51.7e-4642.31Show/hide
Query:  HLRRDYS-----HLNAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEWFESLGLI
        H RRD S      +++ K+    +   +  +R  W PG +PP +LDG+L GD+GFDPLGLG DPE LKW+ QAEL+H+R+AML VAGIL  +   + G+ 
Subjt:  HLRRDYS-----HLNAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEWFESLGLI

Query:  ENFSWYDAGTREY-FADPTTLLVAQLGLMGWAEGRRWADMVNPGSVDVDLKLPHKKKPA---PDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLA
            WY+AG  ++ FA   TL+V Q  LMG+AE +R+ D V+PGS   +       + A    + GYPGG   +P+   +   +     + KEIKNGRLA
Subjt:  ENFSWYDAGTREY-FADPTTLLVAQLGLMGWAEGRRWADMVNPGSVDVDLKLPHKKKPA---PDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLA

Query:  MLAFVGLWFQAIYTGQGPLENLAAHLADPGHCNI
        M+A +G + QA  T  GP++NL  HL++P H  I
Subjt:  MLAFVGLWFQAIYTGQGPLENLAAHLADPGHCNI

AT3G47470.1 light-harvesting chlorophyll-protein complex I subunit A45.0e-5448.21Show/hide
Query:  LRRDYSHLNAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIENFSWY
        L RD S  +   S  +S  + +   +  W PG + P++L GSL GD GFDPLGL  DPE LKWF QAEL++ RWAML VAG+LLPE F  +G+I    WY
Subjt:  LRRDYSHLNAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIENFSWY

Query:  DAGTREYFADPTTLLVAQLGLMGWAEGRRWADMVNPGSVDVDLKLPHKKKPAPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQ
        DAG  +YFA  +TL V +  L  + E RRW D+ NPGSV+ D        P  +VGYPGG  F+P+ +      P    + KE+ NGRLAMLAF+G   Q
Subjt:  DAGTREYFADPTTLLVAQLGLMGWAEGRRWADMVNPGSVDVDLKLPHKKKPAPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQ

Query:  AIYTGQGPLENLAAHLADPGHCNI
           TG+GP ENL  HL+DP H  I
Subjt:  AIYTGQGPLENLAAHLADPGHCNI

AT3G61470.1 photosystem I light harvesting complex gene 21.9e-8566.5Show/hide
Query:  PDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIENFSWYDAGTREYFADPTTLLVAQLGLMG
        PDRP+WFPGS+PPEWLDGSLPGDFGFDPLGL SDP+ LKW  QAE++H RWAML  AGI +PE+   +G++   SWY AG +EYF D TTL V +L L+G
Subjt:  PDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIENFSWYDAGTREYFADPTTLLVAQLGLMG

Query:  WAEGRRWADMVNPGSVDVDLKLPHKKKPAPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHLADPGHCN
        WAEGRRWAD++ PGSV+ D   P+ K    DVGYPGG WFDP+ WG GSP  +  LRTKEIKNGRLAMLA +G WFQ IYTG GP++NL AHLADPGH  
Subjt:  WAEGRRWADMVNPGSVDVDLKLPHKKKPAPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHLADPGHCN

Query:  IFS
        IF+
Subjt:  IFS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCCCACACCAGACATTTTCCCGGAAAGTTCACAAAACACCTCCGCCGAGACTATTCCCATTTGAACGCCGCCAAATCCGGCGTCTCCAGCGTCTGCGAACCGCTCCCTCC
CGACAGACCTCTCTGGTTCCCCGGCAGCAGCCCCCCTGAGTGGCTCGACGGCAGCCTTCCCGGCGATTTTGGCTTCGACCCCCTTGGATTGGGTTCTGATCCAGAGCTGC
TGAAATGGTTCGCACAAGCGGAGCTGATGCACGCCAGATGGGCGATGCTGGCGGTGGCCGGAATCCTGCTACCGGAGTGGTTCGAGAGCCTGGGATTGATCGAGAATTTC
TCGTGGTACGACGCCGGAACCCGGGAATATTTCGCGGACCCGACGACGTTGTTGGTGGCGCAATTGGGTCTAATGGGGTGGGCGGAGGGGCGGCGGTGGGCGGACATGGT
CAACCCGGGGAGCGTGGACGTTGACCTGAAACTGCCACACAAGAAGAAGCCGGCGCCGGACGTGGGATACCCGGGCGGGTTCTGGTTCGACCCGATGATGTGGGGGAGAG
GGTCACCGGAGCCGGTCATGGTGCTCCGGACCAAGGAGATTAAGAACGGCCGCCTCGCCATGCTGGCGTTCGTCGGACTGTGGTTTCAGGCCATTTATACCGGCCAAGGC
CCGCTCGAGAATCTGGCGGCGCACCTCGCCGATCCCGGCCACTGCAACATCTTTTCG
mRNA sequenceShow/hide mRNA sequence
TCCCACACCAGACATTTTCCCGGAAAGTTCACAAAACACCTCCGCCGAGACTATTCCCATTTGAACGCCGCCAAATCCGGCGTCTCCAGCGTCTGCGAACCGCTCCCTCC
CGACAGACCTCTCTGGTTCCCCGGCAGCAGCCCCCCTGAGTGGCTCGACGGCAGCCTTCCCGGCGATTTTGGCTTCGACCCCCTTGGATTGGGTTCTGATCCAGAGCTGC
TGAAATGGTTCGCACAAGCGGAGCTGATGCACGCCAGATGGGCGATGCTGGCGGTGGCCGGAATCCTGCTACCGGAGTGGTTCGAGAGCCTGGGATTGATCGAGAATTTC
TCGTGGTACGACGCCGGAACCCGGGAATATTTCGCGGACCCGACGACGTTGTTGGTGGCGCAATTGGGTCTAATGGGGTGGGCGGAGGGGCGGCGGTGGGCGGACATGGT
CAACCCGGGGAGCGTGGACGTTGACCTGAAACTGCCACACAAGAAGAAGCCGGCGCCGGACGTGGGATACCCGGGCGGGTTCTGGTTCGACCCGATGATGTGGGGGAGAG
GGTCACCGGAGCCGGTCATGGTGCTCCGGACCAAGGAGATTAAGAACGGCCGCCTCGCCATGCTGGCGTTCGTCGGACTGTGGTTTCAGGCCATTTATACCGGCCAAGGC
CCGCTCGAGAATCTGGCGGCGCACCTCGCCGATCCCGGCCACTGCAACATCTTTTCG
Protein sequenceShow/hide protein sequence
SHTRHFPGKFTKHLRRDYSHLNAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIENF
SWYDAGTREYFADPTTLLVAQLGLMGWAEGRRWADMVNPGSVDVDLKLPHKKKPAPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQG
PLENLAAHLADPGHCNIFS