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MS023166 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS023166
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionEukaryotic translation initiation factor 3 subunit K
Genome locationscaffold78:627484..627626
RNA-Seq ExpressionMS023166
SyntenyMS023166
Gene Ontology termsGO:0001732 - formation of cytoplasmic translation initiation complex (biological process)
GO:0006446 - regulation of translational initiation (biological process)
GO:0005852 - eukaryotic translation initiation factor 3 complex (cellular component)
GO:0016282 - eukaryotic 43S preinitiation complex (cellular component)
GO:0033290 - eukaryotic 48S preinitiation complex (cellular component)
GO:0003743 - translation initiation factor activity (molecular function)
GO:0008168 - methyltransferase activity (molecular function)
GO:0043022 - ribosome binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7023727.1 Eukaryotic translation initiation factor 3 subunit K, partial [Cucurbita argyrosperma subsp. argyrosperma]3.8e-0873.47Show/hide
Query:  MGRELQKQPQQDMVFDVE--LAVNPYNPNILHDLENYVNEQVLISLFSL
        MGRELQKQPQQ+M   VE  LAVNPYNP+IL DLENYVNEQV    +SL
Subjt:  MGRELQKQPQQDMVFDVE--LAVNPYNPNILHDLENYVNEQVLISLFSL
XP_004144055.1 eukaryotic translation initiation factor 3 subunit K [Cucumis sativus]3.8e-0873.47Show/hide
Query:  MGRELQKQPQQDMVFDVE--LAVNPYNPNILHDLENYVNEQVLISLFSL
        MGRELQKQPQQ+M   VE  LAVNPYNP+IL DLENYVNEQV    +SL
Subjt:  MGRELQKQPQQDMVFDVE--LAVNPYNPNILHDLENYVNEQVLISLFSL
XP_022933863.1 eukaryotic translation initiation factor 3 subunit K-like [Cucurbita moschata]3.8e-0873.47Show/hide
Query:  MGRELQKQPQQDMVFDVE--LAVNPYNPNILHDLENYVNEQVLISLFSL
        MGRELQKQPQQ+M   VE  LAVNPYNP+IL DLENYVNEQV    +SL
Subjt:  MGRELQKQPQQDMVFDVE--LAVNPYNPNILHDLENYVNEQVLISLFSL
XP_023516999.1 eukaryotic translation initiation factor 3 subunit K-like [Cucurbita pepo subsp. pepo]3.8e-0873.47Show/hide
Query:  MGRELQKQPQQDMVFDVE--LAVNPYNPNILHDLENYVNEQVLISLFSL
        MGRELQKQPQQ+M   VE  LAVNPYNP+IL DLENYVNEQV    +SL
Subjt:  MGRELQKQPQQDMVFDVE--LAVNPYNPNILHDLENYVNEQVLISLFSL
XP_023530808.1 eukaryotic translation initiation factor 3 subunit K-like [Cucurbita pepo subsp. pepo]3.8e-0873.47Show/hide
Query:  MGRELQKQPQQDMVFDVE--LAVNPYNPNILHDLENYVNEQVLISLFSL
        MGRELQKQPQQ+M   VE  LAVNPYNP+IL DLENYVNEQV    +SL
Subjt:  MGRELQKQPQQDMVFDVE--LAVNPYNPNILHDLENYVNEQVLISLFSL
TrEMBL top hitse value%identityAlignment
A0A0A0LZ54 Eukaryotic translation initiation factor 3 subunit K1.8e-0873.47Show/hide
Query:  MGRELQKQPQQDMVFDVE--LAVNPYNPNILHDLENYVNEQVLISLFSL
        MGRELQKQPQQ+M   VE  LAVNPYNP+IL DLENYVNEQV    +SL
Subjt:  MGRELQKQPQQDMVFDVE--LAVNPYNPNILHDLENYVNEQVLISLFSL
A0A6J1D1W0 Eukaryotic translation initiation factor 3 subunit K1.8e-0873.47Show/hide
Query:  MGRELQKQPQQDMVFDVE--LAVNPYNPNILHDLENYVNEQVLISLFSL
        MGRELQKQPQQ+M   VE  LAVNPYNP+IL DLENYVNEQV    +SL
Subjt:  MGRELQKQPQQDMVFDVE--LAVNPYNPNILHDLENYVNEQVLISLFSL
A0A6J1HBM6 Eukaryotic translation initiation factor 3 subunit K1.8e-0873.47Show/hide
Query:  MGRELQKQPQQDMVFDVE--LAVNPYNPNILHDLENYVNEQVLISLFSL
        MGRELQKQPQQ+M   VE  LAVNPYNP+IL DLENYVNEQV    +SL
Subjt:  MGRELQKQPQQDMVFDVE--LAVNPYNPNILHDLENYVNEQVLISLFSL
A0A6J1HSW3 Eukaryotic translation initiation factor 3 subunit K1.8e-0873.47Show/hide
Query:  MGRELQKQPQQDMVFDVE--LAVNPYNPNILHDLENYVNEQVLISLFSL
        MGRELQKQPQQ+M   VE  LAVNPYNP+IL DLENYVNEQV    +SL
Subjt:  MGRELQKQPQQDMVFDVE--LAVNPYNPNILHDLENYVNEQVLISLFSL
A0A6J1JLW5 Eukaryotic translation initiation factor 3 subunit K1.8e-0873.47Show/hide
Query:  MGRELQKQPQQDMVFDVE--LAVNPYNPNILHDLENYVNEQVLISLFSL
        MGRELQKQPQQ+M   VE  LAVNPYNP+IL DLENYVNEQV    +SL
Subjt:  MGRELQKQPQQDMVFDVE--LAVNPYNPNILHDLENYVNEQVLISLFSL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G33250.1 eukaryotic translation initiation factor 3K3.5e-0456.41Show/hide
Query:  MGRELQKQPQQDMVFDVE--LAVNPYNPNILHDLENYVN
        MG E+Q  PQ+   + VE  +A+NP+NP IL DLENYVN
Subjt:  MGRELQKQPQQDMVFDVE--LAVNPYNPNILHDLENYVN

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAGAGAATTGCAGAAGCAGCCGCAGCAGGATATGGTGTTCGATGTGGAACTCGCGGTAAATCCTTACAATCCAAACATCCTCCATGATCTCGAAAACTACGTGAA
CGAGCAGGTCCTTATCTCTCTATTTTCACTT
mRNA sequenceShow/hide mRNA sequence
ATGGGGAGAGAATTGCAGAAGCAGCCGCAGCAGGATATGGTGTTCGATGTGGAACTCGCGGTAAATCCTTACAATCCAAACATCCTCCATGATCTCGAAAACTACGTGAA
CGAGCAGGTCCTTATCTCTCTATTTTCACTT
Protein sequenceShow/hide protein sequence
MGRELQKQPQQDMVFDVELAVNPYNPNILHDLENYVNEQVLISLFSL