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MS023178 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS023178
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionTATA-box-binding protein
Genome locationscaffold78:719002..719076
RNA-Seq ExpressionMS023178
SyntenyMS023178
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6484527.1 hypothetical protein ZIOFF_053046 [Zingiber officinale]3.9e-0496Show/hide
Query:  QVREETYTAFENIYPVLTEFRKNQQ
        QVR+ETYTAFENIYPVLTEFRKNQQ
Subjt:  QVREETYTAFENIYPVLTEFRKNQQ
KAG6588117.1 TATA-box-binding protein, partial [Cucurbita argyrosperma subsp. sororia]5.1e-0496Show/hide
Query:  QVREETYTAFENIYPVLTEFRKNQQ
        +VREETYTAFENIYPVLTEFRKNQQ
Subjt:  QVREETYTAFENIYPVLTEFRKNQQ
KZM93622.1 hypothetical protein DCAR_016867 [Daucus carota subsp. sativus]5.1e-0496Show/hide
Query:  QVREETYTAFENIYPVLTEFRKNQQ
        +VREETYTAFENIYPVLTEFRKNQQ
Subjt:  QVREETYTAFENIYPVLTEFRKNQQ
XP_019162400.1 PREDICTED: TATA-box-binding protein-like [Ipomoea nil]5.1e-0496Show/hide
Query:  QVREETYTAFENIYPVLTEFRKNQQ
        +VREETYTAFENIYPVLTEFRKNQQ
Subjt:  QVREETYTAFENIYPVLTEFRKNQQ
XP_024986276.1 TATA-box-binding protein-like [Cynara cardunculus var. scolymus]5.1e-0496Show/hide
Query:  QVREETYTAFENIYPVLTEFRKNQQ
        +VREETYTAFENIYPVLTEFRKNQQ
Subjt:  QVREETYTAFENIYPVLTEFRKNQQ
TrEMBL top hitse value%identityAlignment
A0A161ZZ09 Uncharacterized protein2.5e-0496Show/hide
Query:  QVREETYTAFENIYPVLTEFRKNQQ
        +VREETYTAFENIYPVLTEFRKNQQ
Subjt:  QVREETYTAFENIYPVLTEFRKNQQ
A0A5A7UIK5 TATA-box-binding protein isoform X22.5e-0496Show/hide
Query:  QVREETYTAFENIYPVLTEFRKNQQ
        +VREETYTAFENIYPVLTEFRKNQQ
Subjt:  QVREETYTAFENIYPVLTEFRKNQQ
A0A6J1H9G6 TATA-box-binding protein2.5e-0496Show/hide
Query:  QVREETYTAFENIYPVLTEFRKNQQ
        +VREETYTAFENIYPVLTEFRKNQQ
Subjt:  QVREETYTAFENIYPVLTEFRKNQQ
A0A6J1JDU6 TATA-box-binding protein2.5e-0496Show/hide
Query:  QVREETYTAFENIYPVLTEFRKNQQ
        +VREETYTAFENIYPVLTEFRKNQQ
Subjt:  QVREETYTAFENIYPVLTEFRKNQQ
A0A7J6GFX1 Uncharacterized protein2.5e-0496Show/hide
Query:  QVREETYTAFENIYPVLTEFRKNQQ
        +VREETYTAFENIYPVLTEFRKNQQ
Subjt:  QVREETYTAFENIYPVLTEFRKNQQ
SwissProt top hitse value%identityAlignment
P26357 TATA-box-binding protein1.5e-0692Show/hide
Query:  QVREETYTAFENIYPVLTEFRKNQQ
        +VR+ETYTAFENIYPVLTEFRKNQQ
Subjt:  QVREETYTAFENIYPVLTEFRKNQQ
P48511 TATA-box-binding protein6.7e-0796Show/hide
Query:  QVREETYTAFENIYPVLTEFRKNQQ
        +VREETYTAFENIYPVLTEFRKNQQ
Subjt:  QVREETYTAFENIYPVLTEFRKNQQ
P93348 TATA-box-binding protein1.5e-0692Show/hide
Query:  QVREETYTAFENIYPVLTEFRKNQQ
        +VR+ETYTAFENIYPVLTEFRKNQQ
Subjt:  QVREETYTAFENIYPVLTEFRKNQQ
Q42808 TATA-box-binding protein1.5e-0692Show/hide
Query:  QVREETYTAFENIYPVLTEFRKNQQ
        +VR+ETYTAFENIYPVLTEFRKNQQ
Subjt:  QVREETYTAFENIYPVLTEFRKNQQ
Q8W0W4 TATA-binding protein 21.6e-0588Show/hide
Query:  QVREETYTAFENIYPVLTEFRKNQQ
        +VR+ETYTAFENIYPVLTEFRK QQ
Subjt:  QVREETYTAFENIYPVLTEFRKNQQ
Arabidopsis top hitse value%identityAlignment
AT1G55520.1 TATA binding protein 25.8e-0684Show/hide
Query:  QVREETYTAFENIYPVLTEFRKNQQ
        ++REETYTAFENIYPVL EFRK QQ
Subjt:  QVREETYTAFENIYPVLTEFRKNQQ
AT1G55520.2 TATA binding protein 25.8e-0684Show/hide
Query:  QVREETYTAFENIYPVLTEFRKNQQ
        ++REETYTAFENIYPVL EFRK QQ
Subjt:  QVREETYTAFENIYPVLTEFRKNQQ
AT3G13445.1 TATA binding protein 13.8e-0576Show/hide
Query:  QVREETYTAFENIYPVLTEFRKNQQ
        ++R+ETY AFENIYPVL+EFRK QQ
Subjt:  QVREETYTAFENIYPVLTEFRKNQQ

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CAGGTGAGGGAGGAGACGTATACAGCATTTGAGAACATATACCCAGTGCTTACAGAGTTCAGGAAAAACCAGCAA
mRNA sequenceShow/hide mRNA sequence
CAGGTGAGGGAGGAGACGTATACAGCATTTGAGAACATATACCCAGTGCTTACAGAGTTCAGGAAAAACCAGCAA
Protein sequenceShow/hide protein sequence
QVREETYTAFENIYPVLTEFRKNQQ