; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS023190 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS023190
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionarabinogalactan peptide 13-like
Genome locationscaffold78:843038..843217
RNA-Seq ExpressionMS023190
SyntenyMS023190
Gene Ontology termsGO:0031225 - anchored component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7022018.1 Arabinogalactan peptide 14, partial [Cucurbita argyrosperma subsp. argyrosperma]8.2e-0874.58Show/hide
Query:  MEAMKVQVLMVTIMVVGAMALSSSIVAAQEGPAPSPASAAPISLPTFMASLAPLALAFF
        M AMK + LMV  MVV  MA SSSIVAAQE PAPSPAS AP+SLPT MASLAPL L FF
Subjt:  MEAMKVQVLMVTIMVVGAMALSSSIVAAQEGPAPSPASAAPISLPTFMASLAPLALAFF
KAG7023913.1 Arabinogalactan peptide 14, partial [Cucurbita argyrosperma subsp. argyrosperma]2.0e-0979.66Show/hide
Query:  MEAMKVQVLMVTIMVVGAMALSSSIVAAQEGPAPSPASAAPISLPTFMASLAPLALAFF
        MEAMK Q LM+  MVVGAMALSS+IVAAQE PAPSPAS A +SLPT MASLAPLAL FF
Subjt:  MEAMKVQVLMVTIMVVGAMALSSSIVAAQEGPAPSPASAAPISLPTFMASLAPLALAFF
XP_011660059.1 arabinogalactan protein 13 [Cucumis sativus]2.5e-0463.33Show/hide
Query:  AMKVQVLMVTIMVVGAMALSSS--IVAAQEGPAPSPASAAPISLPTFMASLAPLALAFFF
        A + Q LMVT+MVV  +A+SSS  IVAAQE PAPSPAS A +S+PT MAS  PL   FFF
Subjt:  AMKVQVLMVTIMVVGAMALSSS--IVAAQEGPAPSPASAAPISLPTFMASLAPLALAFFF
XP_022988237.1 arabinogalactan peptide 13-like [Cucurbita maxima]2.3e-1081.36Show/hide
Query:  MEAMKVQVLMVTIMVVGAMALSSSIVAAQEGPAPSPASAAPISLPTFMASLAPLALAFF
        MEAMK Q LM+  MVVGAMALSS+IVAAQE PAPSPAS AP+SLPT MASLAPLAL FF
Subjt:  MEAMKVQVLMVTIMVVGAMALSSSIVAAQEGPAPSPASAAPISLPTFMASLAPLALAFF
XP_038879727.1 arabinogalactan protein 13-like [Benincasa hispida]1.3e-0878.33Show/hide
Query:  MEAMKVQVLMVTIMVVGAMAL-SSSIVAAQEGPAPSPASAAPISLPTFMASLAPLALAFF
        MEAMK Q LM+ IMVV  MA  SSSIVAAQE PAPSPAS APISLPT MASLAPL L FF
Subjt:  MEAMKVQVLMVTIMVVGAMAL-SSSIVAAQEGPAPSPASAAPISLPTFMASLAPLALAFF
TrEMBL top hitse value%identityAlignment
A0A0A0LWU9 Uncharacterized protein1.2e-0463.33Show/hide
Query:  AMKVQVLMVTIMVVGAMALSSS--IVAAQEGPAPSPASAAPISLPTFMASLAPLALAFFF
        A + Q LMVT+MVV  +A+SSS  IVAAQE PAPSPAS A +S+PT MAS  PL   FFF
Subjt:  AMKVQVLMVTIMVVGAMALSSS--IVAAQEGPAPSPASAAPISLPTFMASLAPLALAFFF
A0A6J1JCI6 arabinogalactan peptide 13-like1.1e-1081.36Show/hide
Query:  MEAMKVQVLMVTIMVVGAMALSSSIVAAQEGPAPSPASAAPISLPTFMASLAPLALAFF
        MEAMK Q LM+  MVVGAMALSS+IVAAQE PAPSPAS AP+SLPT MASLAPLAL FF
Subjt:  MEAMKVQVLMVTIMVVGAMALSSSIVAAQEGPAPSPASAAPISLPTFMASLAPLALAFF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G56540.1 arabinogalactan protein 143.4e-0446.67Show/hide
Query:  MEAMKVQVLMVTIMVVGAMALSSSIVAAQEGPAPSPASAAPISLPTFMASLAPLALAFFF
        MEAMK+++ +V ++ V A +     VAA + PAPSP S A   +PTF AS+A +A  FFF
Subjt:  MEAMKVQVLMVTIMVVGAMALSSSIVAAQEGPAPSPASAAPISLPTFMASLAPLALAFFF

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGCAATGAAGGTTCAAGTTTTGATGGTGACAATAATGGTGGTGGGAGCAATGGCGTTGTCATCCTCCATTGTTGCAGCTCAAGAAGGTCCAGCCCCAAGCCCAGC
TTCTGCTGCTCCAATTTCCCTCCCAACTTTCATGGCTTCTCTTGCCCCTCTCGCTCTTGCCTTCTTCTTC
mRNA sequenceShow/hide mRNA sequence
ATGGAGGCAATGAAGGTTCAAGTTTTGATGGTGACAATAATGGTGGTGGGAGCAATGGCGTTGTCATCCTCCATTGTTGCAGCTCAAGAAGGTCCAGCCCCAAGCCCAGC
TTCTGCTGCTCCAATTTCCCTCCCAACTTTCATGGCTTCTCTTGCCCCTCTCGCTCTTGCCTTCTTCTTC
Protein sequenceShow/hide protein sequence
MEAMKVQVLMVTIMVVGAMALSSSIVAAQEGPAPSPASAAPISLPTFMASLAPLALAFFF