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MS023217 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS023217
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCalpain-type cysteine protease DEK1
Genome locationscaffold78:1068870..1069055
RNA-Seq ExpressionMS023217
SyntenyMS023217
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057846.1 uncharacterized protein E6C27_scaffold274G001330 [Cucumis melo var. makuwa]7.9e-0643.4Show/hide
Query:  ASEDLNHILWSCQFPQLIWNRFLEVFEVSWAGNRDCSTSLEEVLLFPPLRNKG
        A EDL+H+ W C +  ++W+ FL+ F VS+A  R    ++EE LL  P R+KG
Subjt:  ASEDLNHILWSCQFPQLIWNRFLEVFEVSWAGNRDCSTSLEEVLLFPPLRNKG

TYJ96204.1 nuclear cap-binding protein subunit 2 [Cucumis melo var. makuwa]9.7e-0438.18Show/hide
Query:  NASEDLNHILWSCQFPQLIWNRFLEVFEVSWAG-NRDCSTSLEEVLLFPPLRNKG
        +  EDL+H+LW CQ+ + +W+ FL+ F+V  A   RD    + + L+  P R KG
Subjt:  NASEDLNHILWSCQFPQLIWNRFLEVFEVSWAG-NRDCSTSLEEVLLFPPLRNKG

TYK09969.1 calpain-type cysteine protease DEK1 [Cucumis melo var. makuwa]1.4e-0742.37Show/hide
Query:  EDLNHILWSCQFPQLIWNRFLEVFEVSWAGNRDCSTSLEEVLLFPPLRNKGPLLWQAAI
        EDL+H+LW C+    +W+ FL+ F +S+A +RD   ++EE LL  P   +GP LW A +
Subjt:  EDLNHILWSCQFPQLIWNRFLEVFEVSWAGNRDCSTSLEEVLLFPPLRNKGPLLWQAAI

TYK11201.1 SIL1 [Cucumis melo var. makuwa]1.4e-0740.98Show/hide
Query:  ASEDLNHILWSCQFPQLIWNRFLEVFEVSWAGNRDCSTSLEEVLLFPPLRNKGPLLWQAAI
        A EDL+++ W CQ  + +WN FL+ F+  + G R    ++EE LL PP R K  +LW A +
Subjt:  ASEDLNHILWSCQFPQLIWNRFLEVFEVSWAGNRDCSTSLEEVLLFPPLRNKGPLLWQAAI

TYK29954.1 reverse transcriptase [Cucumis melo var. makuwa]4.3e-0446.67Show/hide
Query:  ASEDLNHILWSCQFPQLIWNRFLEVFEVSWAGNRDCSTSLEEVLL
        A EDL+H+LW CQ+ + +W  FL+ F+V  AG R    ++EE LL
Subjt:  ASEDLNHILWSCQFPQLIWNRFLEVFEVSWAGNRDCSTSLEEVLL

TrEMBL top hitse value%identityAlignment
A0A5A7UUK8 Uncharacterized protein3.8e-0643.4Show/hide
Query:  ASEDLNHILWSCQFPQLIWNRFLEVFEVSWAGNRDCSTSLEEVLLFPPLRNKG
        A EDL+H+ W C +  ++W+ FL+ F VS+A  R    ++EE LL  P R+KG
Subjt:  ASEDLNHILWSCQFPQLIWNRFLEVFEVSWAGNRDCSTSLEEVLLFPPLRNKG

A0A5D3BB82 Nuclear cap-binding protein subunit 24.7e-0438.18Show/hide
Query:  NASEDLNHILWSCQFPQLIWNRFLEVFEVSWAG-NRDCSTSLEEVLLFPPLRNKG
        +  EDL+H+LW CQ+ + +W+ FL+ F+V  A   RD    + + L+  P R KG
Subjt:  NASEDLNHILWSCQFPQLIWNRFLEVFEVSWAG-NRDCSTSLEEVLLFPPLRNKG

A0A5D3CHC7 SIL17.0e-0840.98Show/hide
Query:  ASEDLNHILWSCQFPQLIWNRFLEVFEVSWAGNRDCSTSLEEVLLFPPLRNKGPLLWQAAI
        A EDL+++ W CQ  + +WN FL+ F+  + G R    ++EE LL PP R K  +LW A +
Subjt:  ASEDLNHILWSCQFPQLIWNRFLEVFEVSWAGNRDCSTSLEEVLLFPPLRNKGPLLWQAAI

A0A5D3CI74 Calpain-type cysteine protease DEK17.0e-0842.37Show/hide
Query:  EDLNHILWSCQFPQLIWNRFLEVFEVSWAGNRDCSTSLEEVLLFPPLRNKGPLLWQAAI
        EDL+H+LW C+    +W+ FL+ F +S+A +RD   ++EE LL  P   +GP LW A +
Subjt:  EDLNHILWSCQFPQLIWNRFLEVFEVSWAGNRDCSTSLEEVLLFPPLRNKGPLLWQAAI

A0A5D3E255 Reverse transcriptase2.1e-0446.67Show/hide
Query:  ASEDLNHILWSCQFPQLIWNRFLEVFEVSWAGNRDCSTSLEEVLL
        A EDL+H+LW CQ+ + +W  FL+ F+V  AG R    ++EE LL
Subjt:  ASEDLNHILWSCQFPQLIWNRFLEVFEVSWAGNRDCSTSLEEVLL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AACGCTTCTGAGGACCTTAATCATATTTTGTGGAGTTGTCAGTTTCCTCAGCTTATTTGGAATCGATTTCTAGAGGTTTTCGAGGTCTCTTGGGCAGGTAATAGAGATTG
TAGCACTTCGTTGGAGGAGGTGTTGTTGTTCCCACCGCTCCGAAATAAAGGGCCTTTGTTATGGCAGGCTGCCATC
mRNA sequenceShow/hide mRNA sequence
AACGCTTCTGAGGACCTTAATCATATTTTGTGGAGTTGTCAGTTTCCTCAGCTTATTTGGAATCGATTTCTAGAGGTTTTCGAGGTCTCTTGGGCAGGTAATAGAGATTG
TAGCACTTCGTTGGAGGAGGTGTTGTTGTTCCCACCGCTCCGAAATAAAGGGCCTTTGTTATGGCAGGCTGCCATC
Protein sequenceShow/hide protein sequence
NASEDLNHILWSCQFPQLIWNRFLEVFEVSWAGNRDCSTSLEEVLLFPPLRNKGPLLWQAAI