; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS023220 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS023220
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold78:1098599..1099103
RNA-Seq ExpressionMS023220
SyntenyMS023220
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022157363.1 uncharacterized protein LOC111024084 [Momordica charantia]4.2e-6698.62Show/hide
Query:  MSSLEWGKGRKRMIEEQAKEELEALQLLHPDRFEYLKLELKSFIQLLQSQSQSDHPNAHEASKPSPTSLAPDSQAESSSCRKRRKIIEESGSEKACGNRL
        MSSLEWGKGRKRMIEEQA EELEALQLLHPDRFEYLKLELKSFIQLLQSQSQSDHPNAHEASKPSPTSLAPDSQ ESSSCRKRRKIIEESGSEKACGNRL
Subjt:  MSSLEWGKGRKRMIEEQAKEELEALQLLHPDRFEYLKLELKSFIQLLQSQSQSDHPNAHEASKPSPTSLAPDSQAESSSCRKRRKIIEESGSEKACGNRL

Query:  HRATAAESETGEMIGRRNRVDVVLERAVVCLRKIRRFKTALFSAA
        HRATAAESETGEMIGRRNRVDVVLERAVVCLRKIRRFKTALFSAA
Subjt:  HRATAAESETGEMIGRRNRVDVVLERAVVCLRKIRRFKTALFSAA

XP_022933879.1 uncharacterized protein LOC111441161 isoform X1 [Cucurbita moschata]9.7e-3971.24Show/hide
Query:  MSSLEWGKGRKRMIEEQAKEELEALQLLHPDRFEYLKLELKSFIQLLQSQSQS------DHPNAHEAS-KPSPTSLAPDSQAESSSCRKRRKIIEESGSE
        M  LEW + RKRMIE+QAK ELE+LQLLHP+RFEYLKLELKSFIQLLQSQSQS        PN  EAS + SP++LAPDSQAESSSCRKRRK +EE G  
Subjt:  MSSLEWGKGRKRMIEEQAKEELEALQLLHPDRFEYLKLELKSFIQLLQSQSQS------DHPNAHEAS-KPSPTSLAPDSQAESSSCRKRRKIIEESGSE

Query:  KACGNRLHRATAAESETGEMIG-RRNRVDVVLERAVVCLRKIRRFKTALFSAA
        K  GN L R   AESETG+  G RR+RVDVVLERAVVCLRKI+RFKTAL S A
Subjt:  KACGNRLHRATAAESETGEMIG-RRNRVDVVLERAVVCLRKIRRFKTALFSAA

XP_022968438.1 uncharacterized protein LOC111467682 isoform X1 [Cucurbita maxima]1.8e-4073.51Show/hide
Query:  MSSLEWGKGRKRMIEEQAKEELEALQLLHPDRFEYLKLELKSFIQLLQSQSQSD----HPNAHEAS-KPSPTSLAPDSQAESSSCRKRRKIIEESGSEKA
        M+ LEW + RKRMIE+QAK ELE+LQLLHP+RFEYLKLELKSFIQLLQSQSQS+     PNA EAS + SP+SLAPDSQAESSSCRKRRK +EE G  K 
Subjt:  MSSLEWGKGRKRMIEEQAKEELEALQLLHPDRFEYLKLELKSFIQLLQSQSQSD----HPNAHEAS-KPSPTSLAPDSQAESSSCRKRRKIIEESGSEKA

Query:  CGNRLHRATAAESETGEMIG-RRNRVDVVLERAVVCLRKIRRFKTALFSAA
         G+RL R   AESETG+  G RR+RVDVVLERAVVCLRKI+RFKTAL S A
Subjt:  CGNRLHRATAAESETGEMIG-RRNRVDVVLERAVVCLRKIRRFKTALFSAA

XP_022968454.1 uncharacterized protein LOC111467682 isoform X2 [Cucurbita maxima]9.7e-3972.85Show/hide
Query:  MSSLEWGKGRKRMIEEQAKEELEALQLLHPDRFEYLKLELKSFIQLLQSQSQSD----HPNAHEAS-KPSPTSLAPDSQAESSSCRKRRKIIEESGSEKA
        M+ LEW + RKRMIE+QAK ELE+LQLLHP+RFEYLKLELKSFIQLLQSQSQS+     PNA EAS + SP+SLAPDSQ ESSSCRKRRK +EE G  K 
Subjt:  MSSLEWGKGRKRMIEEQAKEELEALQLLHPDRFEYLKLELKSFIQLLQSQSQSD----HPNAHEAS-KPSPTSLAPDSQAESSSCRKRRKIIEESGSEKA

Query:  CGNRLHRATAAESETGEMIG-RRNRVDVVLERAVVCLRKIRRFKTALFSAA
         G+RL R   AESETG+  G RR+RVDVVLERAVVCLRKI+RFKTAL S A
Subjt:  CGNRLHRATAAESETGEMIG-RRNRVDVVLERAVVCLRKIRRFKTALFSAA

XP_023531053.1 uncharacterized protein LOC111793421 [Cucurbita pepo subsp. pepo]2.4e-3771.24Show/hide
Query:  MSSLEWGKGRKRMIEEQAKEELEALQLLHPDRFEYLKLELKSFIQLLQSQSQSD------HPNAHEAS-KPSPTSLAPDSQAESSSCRKRRKIIEESGSE
        M+ LEW + RKRMIE+QAK ELE+LQLLHP+RFEYLKLELKSFIQLLQSQSQS        PN  EAS + SP+SLAPDSQ ESSSCRKRRK  EE G  
Subjt:  MSSLEWGKGRKRMIEEQAKEELEALQLLHPDRFEYLKLELKSFIQLLQSQSQSD------HPNAHEAS-KPSPTSLAPDSQAESSSCRKRRKIIEESGSE

Query:  KACGNRLHRATAAESETGEMIG-RRNRVDVVLERAVVCLRKIRRFKTALFSAA
        K  GN L R   AESETG+  G RR+RVDVVLERAVVCLRKI+RFKTAL S A
Subjt:  KACGNRLHRATAAESETGEMIG-RRNRVDVVLERAVVCLRKIRRFKTALFSAA

TrEMBL top hitse value%identityAlignment
A0A6J1DT63 uncharacterized protein LOC1110240842.0e-6698.62Show/hide
Query:  MSSLEWGKGRKRMIEEQAKEELEALQLLHPDRFEYLKLELKSFIQLLQSQSQSDHPNAHEASKPSPTSLAPDSQAESSSCRKRRKIIEESGSEKACGNRL
        MSSLEWGKGRKRMIEEQA EELEALQLLHPDRFEYLKLELKSFIQLLQSQSQSDHPNAHEASKPSPTSLAPDSQ ESSSCRKRRKIIEESGSEKACGNRL
Subjt:  MSSLEWGKGRKRMIEEQAKEELEALQLLHPDRFEYLKLELKSFIQLLQSQSQSDHPNAHEASKPSPTSLAPDSQAESSSCRKRRKIIEESGSEKACGNRL

Query:  HRATAAESETGEMIGRRNRVDVVLERAVVCLRKIRRFKTALFSAA
        HRATAAESETGEMIGRRNRVDVVLERAVVCLRKIRRFKTALFSAA
Subjt:  HRATAAESETGEMIGRRNRVDVVLERAVVCLRKIRRFKTALFSAA

A0A6J1F0Z4 uncharacterized protein LOC111441161 isoform X14.7e-3971.24Show/hide
Query:  MSSLEWGKGRKRMIEEQAKEELEALQLLHPDRFEYLKLELKSFIQLLQSQSQS------DHPNAHEAS-KPSPTSLAPDSQAESSSCRKRRKIIEESGSE
        M  LEW + RKRMIE+QAK ELE+LQLLHP+RFEYLKLELKSFIQLLQSQSQS        PN  EAS + SP++LAPDSQAESSSCRKRRK +EE G  
Subjt:  MSSLEWGKGRKRMIEEQAKEELEALQLLHPDRFEYLKLELKSFIQLLQSQSQS------DHPNAHEAS-KPSPTSLAPDSQAESSSCRKRRKIIEESGSE

Query:  KACGNRLHRATAAESETGEMIG-RRNRVDVVLERAVVCLRKIRRFKTALFSAA
        K  GN L R   AESETG+  G RR+RVDVVLERAVVCLRKI+RFKTAL S A
Subjt:  KACGNRLHRATAAESETGEMIG-RRNRVDVVLERAVVCLRKIRRFKTALFSAA

A0A6J1F625 uncharacterized protein LOC111441161 isoform X22.6e-3770.59Show/hide
Query:  MSSLEWGKGRKRMIEEQAKEELEALQLLHPDRFEYLKLELKSFIQLLQSQSQS------DHPNAHEAS-KPSPTSLAPDSQAESSSCRKRRKIIEESGSE
        M  LEW + RKRMIE+QAK ELE+LQLLHP+RFEYLKLELKSFIQLLQSQSQS        PN  EAS + SP++LAPDSQ ESSSCRKRRK +EE G  
Subjt:  MSSLEWGKGRKRMIEEQAKEELEALQLLHPDRFEYLKLELKSFIQLLQSQSQS------DHPNAHEAS-KPSPTSLAPDSQAESSSCRKRRKIIEESGSE

Query:  KACGNRLHRATAAESETGEMIG-RRNRVDVVLERAVVCLRKIRRFKTALFSAA
        K  GN L R   AESETG+  G RR+RVDVVLERAVVCLRKI+RFKTAL S A
Subjt:  KACGNRLHRATAAESETGEMIG-RRNRVDVVLERAVVCLRKIRRFKTALFSAA

A0A6J1HY07 uncharacterized protein LOC111467682 isoform X18.6e-4173.51Show/hide
Query:  MSSLEWGKGRKRMIEEQAKEELEALQLLHPDRFEYLKLELKSFIQLLQSQSQSD----HPNAHEAS-KPSPTSLAPDSQAESSSCRKRRKIIEESGSEKA
        M+ LEW + RKRMIE+QAK ELE+LQLLHP+RFEYLKLELKSFIQLLQSQSQS+     PNA EAS + SP+SLAPDSQAESSSCRKRRK +EE G  K 
Subjt:  MSSLEWGKGRKRMIEEQAKEELEALQLLHPDRFEYLKLELKSFIQLLQSQSQSD----HPNAHEAS-KPSPTSLAPDSQAESSSCRKRRKIIEESGSEKA

Query:  CGNRLHRATAAESETGEMIG-RRNRVDVVLERAVVCLRKIRRFKTALFSAA
         G+RL R   AESETG+  G RR+RVDVVLERAVVCLRKI+RFKTAL S A
Subjt:  CGNRLHRATAAESETGEMIG-RRNRVDVVLERAVVCLRKIRRFKTALFSAA

A0A6J1HZP5 uncharacterized protein LOC111467682 isoform X24.7e-3972.85Show/hide
Query:  MSSLEWGKGRKRMIEEQAKEELEALQLLHPDRFEYLKLELKSFIQLLQSQSQSD----HPNAHEAS-KPSPTSLAPDSQAESSSCRKRRKIIEESGSEKA
        M+ LEW + RKRMIE+QAK ELE+LQLLHP+RFEYLKLELKSFIQLLQSQSQS+     PNA EAS + SP+SLAPDSQ ESSSCRKRRK +EE G  K 
Subjt:  MSSLEWGKGRKRMIEEQAKEELEALQLLHPDRFEYLKLELKSFIQLLQSQSQSD----HPNAHEAS-KPSPTSLAPDSQAESSSCRKRRKIIEESGSEKA

Query:  CGNRLHRATAAESETGEMIG-RRNRVDVVLERAVVCLRKIRRFKTALFSAA
         G+RL R   AESETG+  G RR+RVDVVLERAVVCLRKI+RFKTAL S A
Subjt:  CGNRLHRATAAESETGEMIG-RRNRVDVVLERAVVCLRKIRRFKTALFSAA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G36960.1 unknown protein2.3e-0935.37Show/hide
Query:  SSLEWGKGRKRMIEEQAKEELEALQLLHPDRFEYLKLELKSFIQLLQSQSQSDHPNAHEASKPSPTSLAPDSQAESSSC-----RKRRKIIEESGSEKAC
        SS  W    +  + E AKEELE LQ  +P+RF YLK +L+SFI  L+          H   + SP+S    +Q ESS+C      K+RK + ++  ++A 
Subjt:  SSLEWGKGRKRMIEEQAKEELEALQLLHPDRFEYLKLELKSFIQLLQSQSQSDHPNAHEASKPSPTSLAPDSQAESSSC-----RKRRKIIEESGSEKAC

Query:  GNRLHRATAAESETGEMI--GRRNRVDVVLERAVVCLRKIRRFKTAL
         +   +     ++ G+ +   ++NRV++VLERA +CL+KIR  K +L
Subjt:  GNRLHRATAAESETGEMI--GRRNRVDVVLERAVVCLRKIRRFKTAL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGAGCTTGGAATGGGGCAAAGGAAGGAAGAGGATGATCGAAGAACAGGCAAAGGAGGAATTAGAAGCGCTCCAACTTCTCCACCCCGATCGTTTCGAATACCTAAA
GCTCGAGCTCAAGTCCTTCATCCAACTTCTCCAATCGCAATCGCAATCGGACCATCCGAACGCTCACGAAGCCTCCAAACCCTCGCCGACCTCTCTCGCTCCCGATTCAC
AAGCAGAGTCGAGCAGTTGTAGGAAGAGAAGGAAGATAATAGAGGAATCAGGATCAGAGAAAGCATGCGGAAACAGACTCCATAGAGCGACTGCAGCCGAATCGGAGACG
GGAGAGATGATCGGGCGGAGGAACAGAGTGGATGTGGTTCTGGAGAGAGCCGTGGTTTGTCTCCGGAAGATTCGACGCTTCAAAACCGCTCTGTTTTCCGCCGCC
mRNA sequenceShow/hide mRNA sequence
ATGTCGAGCTTGGAATGGGGCAAAGGAAGGAAGAGGATGATCGAAGAACAGGCAAAGGAGGAATTAGAAGCGCTCCAACTTCTCCACCCCGATCGTTTCGAATACCTAAA
GCTCGAGCTCAAGTCCTTCATCCAACTTCTCCAATCGCAATCGCAATCGGACCATCCGAACGCTCACGAAGCCTCCAAACCCTCGCCGACCTCTCTCGCTCCCGATTCAC
AAGCAGAGTCGAGCAGTTGTAGGAAGAGAAGGAAGATAATAGAGGAATCAGGATCAGAGAAAGCATGCGGAAACAGACTCCATAGAGCGACTGCAGCCGAATCGGAGACG
GGAGAGATGATCGGGCGGAGGAACAGAGTGGATGTGGTTCTGGAGAGAGCCGTGGTTTGTCTCCGGAAGATTCGACGCTTCAAAACCGCTCTGTTTTCCGCCGCC
Protein sequenceShow/hide protein sequence
MSSLEWGKGRKRMIEEQAKEELEALQLLHPDRFEYLKLELKSFIQLLQSQSQSDHPNAHEASKPSPTSLAPDSQAESSSCRKRRKIIEESGSEKACGNRLHRATAAESET
GEMIGRRNRVDVVLERAVVCLRKIRRFKTALFSAA