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MS023237 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS023237
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionNAC domain-containing protein
Genome locationscaffold78:1248789..1249253
RNA-Seq ExpressionMS023237
SyntenyMS023237
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR003441 - NAC domain
IPR036093 - NAC domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571617.1 NAC domain-containing protein JA2L, partial [Cucurbita argyrosperma subsp. sororia]1.0e-3055.64Show/hide
Query:  GVEFNPSHEALLVDYLYNKVHGHPYCLEAVKDFDLYGNHEPWQVFDLFGGVDGQDLYFFTQLKRKWPTK-QDSSRISRRVGTNGGTWSGENSETPILSSV
        GV F P+ + LL  YL+ K+HG PY   AV D DLYG  EPW+++  FGG DG+DLYFFT+LKR      + S+ I+R+VG   GTWSGENS +PI ++ 
Subjt:  GVEFNPSHEALLVDYLYNKVHGHPYCLEAVKDFDLYGNHEPWQVFDLFGGVDGQDLYFFTQLKRKWPTK-QDSSRISRRVGTNGGTWSGENSETPILSSV

Query:  TG-GLIGFSKRFRYENGGL-EHHGEWIMKEFSL
        T   +IG+ KRFRYEN  L EHHGEWIM E+SL
Subjt:  TG-GLIGFSKRFRYENGGL-EHHGEWIMKEFSL

TYK12066.1 NAC domain-containing protein 83-like [Cucumis melo var. makuwa]3.0e-3054.14Show/hide
Query:  GVEFNPSHEALLVDYLYNKVHGHPYCLEAVKDFDLYGNHEPWQVFDLFGGVDGQDLYFFTQLKRKWPT-KQDSSRISRRVGTNGGTWSGENSETPILSSV
        GV+F P+ + LL  YLY K++G PY   A+ DFDLYG  EPW+++  F G+DG+DLYFFT+LKR      Q S+ ISR++G   GTWSGENS TPI ++ 
Subjt:  GVEFNPSHEALLVDYLYNKVHGHPYCLEAVKDFDLYGNHEPWQVFDLFGGVDGQDLYFFTQLKRKWPT-KQDSSRISRRVGTNGGTWSGENSETPILSSV

Query:  TG-GLIGFSKRFRYENGGL-EHHGEWIMKEFSL
            +IG+ KRFRYEN  + EHHGEWIM E+ L
Subjt:  TG-GLIGFSKRFRYENGGL-EHHGEWIMKEFSL

XP_004142192.1 NAC domain-containing protein 83 [Cucumis sativus]1.8e-3054.14Show/hide
Query:  GVEFNPSHEALLVDYLYNKVHGHPYCLEAVKDFDLYGNHEPWQVFDLFGGVDGQDLYFFTQLKRKWPTKQD-SSRISRRVGTNGGTWSGENSETPI-LSS
        GV+F P+ + LL  YL+ K++G PY   AV DFDLYG  EPW+++  FGG+DG+DLYFFT+LKR      + S+ I+R++G   GTWSGENS +PI ++ 
Subjt:  GVEFNPSHEALLVDYLYNKVHGHPYCLEAVKDFDLYGNHEPWQVFDLFGGVDGQDLYFFTQLKRKWPTKQD-SSRISRRVGTNGGTWSGENSETPI-LSS

Query:  VTGGLIGFSKRFRYENGGL-EHHGEWIMKEFSL
            +IG+ KRFRYEN  L EHHGEWIM E+SL
Subjt:  VTGGLIGFSKRFRYENGGL-EHHGEWIMKEFSL

XP_022963781.1 NAC domain-containing protein 30-like [Cucurbita moschata]2.3e-3053.96Show/hide
Query:  CPFGIRGVEFNPSHEALLVDYLYNKVHGHPYCLEAVKDFDLYGNHEPWQVFDLFGGVDGQDLYFFTQLKRKWPTK-QDSSRISRRVGTNGGTWSGENSET
        CP    GV F P+ + LL  YL  K+HG PY   AV D DLYG  EPW+++  FGG DG+DLYFFT+LKR      + S+ I+R+VG   GTWSGENS +
Subjt:  CPFGIRGVEFNPSHEALLVDYLYNKVHGHPYCLEAVKDFDLYGNHEPWQVFDLFGGVDGQDLYFFTQLKRKWPTK-QDSSRISRRVGTNGGTWSGENSET

Query:  PILSSVTG-GLIGFSKRFRYENGGL-EHHGEWIMKEFSL
         I ++ T   +IG+ KRFRYEN  L EHHGEWIM E+SL
Subjt:  PILSSVTG-GLIGFSKRFRYENGGL-EHHGEWIMKEFSL

XP_023511534.1 NAC domain-containing protein 72-like [Cucurbita pepo subsp. pepo]2.3e-3055.64Show/hide
Query:  GVEFNPSHEALLVDYLYNKVHGHPYCLEAVKDFDLYGNHEPWQVFDLFGGVDGQDLYFFTQLKRKWPTK-QDSSRISRRVGTNGGTWSGENSETPILSSV
        GV F P+   LL  YL+ K+HG PY   AV D DLYG  EPW+++  FGG+DG+DLYFFT+LKR      + S+ I+R+VG   GTWSGENS +PI ++ 
Subjt:  GVEFNPSHEALLVDYLYNKVHGHPYCLEAVKDFDLYGNHEPWQVFDLFGGVDGQDLYFFTQLKRKWPTK-QDSSRISRRVGTNGGTWSGENSETPILSSV

Query:  TG-GLIGFSKRFRYENGGL-EHHGEWIMKEFSL
        T   +IG+ KRFRYEN  L EHHGEWIM E+SL
Subjt:  TG-GLIGFSKRFRYENGGL-EHHGEWIMKEFSL

TrEMBL top hitse value%identityAlignment
A0A0A0KXM1 NAC domain-containing protein8.6e-3154.14Show/hide
Query:  GVEFNPSHEALLVDYLYNKVHGHPYCLEAVKDFDLYGNHEPWQVFDLFGGVDGQDLYFFTQLKRKWPTKQD-SSRISRRVGTNGGTWSGENSETPI-LSS
        GV+F P+ + LL  YL+ K++G PY   AV DFDLYG  EPW+++  FGG+DG+DLYFFT+LKR      + S+ I+R++G   GTWSGENS +PI ++ 
Subjt:  GVEFNPSHEALLVDYLYNKVHGHPYCLEAVKDFDLYGNHEPWQVFDLFGGVDGQDLYFFTQLKRKWPTKQD-SSRISRRVGTNGGTWSGENSETPI-LSS

Query:  VTGGLIGFSKRFRYENGGL-EHHGEWIMKEFSL
            +IG+ KRFRYEN  L EHHGEWIM E+SL
Subjt:  VTGGLIGFSKRFRYENGGL-EHHGEWIMKEFSL

A0A5A7TC54 NAC domain-containing protein 83-like1.5e-3054.14Show/hide
Query:  GVEFNPSHEALLVDYLYNKVHGHPYCLEAVKDFDLYGNHEPWQVFDLFGGVDGQDLYFFTQLKRKWPT-KQDSSRISRRVGTNGGTWSGENSETPILSSV
        GV+F P+ + LL  YLY K++G PY   A+ DFDLYG  EPW+++  F G+DG+DLYFFT+LKR      Q S+ ISR++G   GTWSGENS TPI ++ 
Subjt:  GVEFNPSHEALLVDYLYNKVHGHPYCLEAVKDFDLYGNHEPWQVFDLFGGVDGQDLYFFTQLKRKWPT-KQDSSRISRRVGTNGGTWSGENSETPILSSV

Query:  TG-GLIGFSKRFRYENGGL-EHHGEWIMKEFSL
            +IG+ KRFRYEN  + EHHGEWIM E+ L
Subjt:  TG-GLIGFSKRFRYENGGL-EHHGEWIMKEFSL

A0A5D3CL63 NAC domain-containing protein 83-like1.5e-3054.14Show/hide
Query:  GVEFNPSHEALLVDYLYNKVHGHPYCLEAVKDFDLYGNHEPWQVFDLFGGVDGQDLYFFTQLKRKWPT-KQDSSRISRRVGTNGGTWSGENSETPILSSV
        GV+F P+ + LL  YLY K++G PY   A+ DFDLYG  EPW+++  F G+DG+DLYFFT+LKR      Q S+ ISR++G   GTWSGENS TPI ++ 
Subjt:  GVEFNPSHEALLVDYLYNKVHGHPYCLEAVKDFDLYGNHEPWQVFDLFGGVDGQDLYFFTQLKRKWPT-KQDSSRISRRVGTNGGTWSGENSETPILSSV

Query:  TG-GLIGFSKRFRYENGGL-EHHGEWIMKEFSL
            +IG+ KRFRYEN  + EHHGEWIM E+ L
Subjt:  TG-GLIGFSKRFRYENGGL-EHHGEWIMKEFSL

A0A5D3CNQ3 NAC domain-containing protein 83-like1.5e-3054.14Show/hide
Query:  GVEFNPSHEALLVDYLYNKVHGHPYCLEAVKDFDLYGNHEPWQVFDLFGGVDGQDLYFFTQLKRKWPT-KQDSSRISRRVGTNGGTWSGENSETPILSSV
        GV+F P+ + LL  YLY K++G PY   A+ DFDLYG  EPW+++  F G+DG+DLYFFT+LKR      Q S+ ISR++G   GTWSGENS TPI ++ 
Subjt:  GVEFNPSHEALLVDYLYNKVHGHPYCLEAVKDFDLYGNHEPWQVFDLFGGVDGQDLYFFTQLKRKWPT-KQDSSRISRRVGTNGGTWSGENSETPILSSV

Query:  TG-GLIGFSKRFRYENGGL-EHHGEWIMKEFSL
            +IG+ KRFRYEN  + EHHGEWIM E+ L
Subjt:  TG-GLIGFSKRFRYENGGL-EHHGEWIMKEFSL

A0A6J1HH13 NAC domain-containing protein 30-like1.1e-3053.96Show/hide
Query:  CPFGIRGVEFNPSHEALLVDYLYNKVHGHPYCLEAVKDFDLYGNHEPWQVFDLFGGVDGQDLYFFTQLKRKWPTK-QDSSRISRRVGTNGGTWSGENSET
        CP    GV F P+ + LL  YL  K+HG PY   AV D DLYG  EPW+++  FGG DG+DLYFFT+LKR      + S+ I+R+VG   GTWSGENS +
Subjt:  CPFGIRGVEFNPSHEALLVDYLYNKVHGHPYCLEAVKDFDLYGNHEPWQVFDLFGGVDGQDLYFFTQLKRKWPTK-QDSSRISRRVGTNGGTWSGENSET

Query:  PILSSVTG-GLIGFSKRFRYENGGL-EHHGEWIMKEFSL
         I ++ T   +IG+ KRFRYEN  L EHHGEWIM E+SL
Subjt:  PILSSVTG-GLIGFSKRFRYENGGL-EHHGEWIMKEFSL

SwissProt top hitse value%identityAlignment
A0A3Q7HH64 NAC domain-containing protein JA2L2.9e-0732.09Show/hide
Query:  GVEFNPSHEALLVDYLYNKVHGHPYCLEAVKDFDLYGNHEPWQVFD--LFGGVDGQDLYFFTQLKRKWPTKQDSSRISRRVGTNGGTWSGENSETPILSS
        G  F P+ E LLV YL  KV GH + L+ + + DLY   +PW +    +FG    ++ YFF+   RK+P   + SR +R  G+  G W    ++  I  +
Subjt:  GVEFNPSHEALLVDYLYNKVHGHPYCLEAVKDFDLYGNHEPWQVFD--LFGGVDGQDLYFFTQLKRKWPTKQDSSRISRRVGTNGGTWSGENSETPILSS

Query:  VTGGLIGFSKRFRYENGGLEH--HGEWIMKEFSL
          G  +G  K   +  G         WIM E+ L
Subjt:  VTGGLIGFSKRFRYENGGLEH--HGEWIMKEFSL

Q93VY3 NAC domain-containing protein 722.2e-0732.84Show/hide
Query:  GVEFNPSHEALLVDYLYNKVHGHPYCLEAVKDFDLYGNHEPWQVFD--LFGGVDGQDLYFFTQLKRKWPTKQDSSRISRRVGTNGGTWSGENSETPILSS
        G  F P+ E LLV YL  KV G+ + L+ + D DLY   +PW +    LFG    ++ YFF+   RK+P   + SR +R  G+  G W    ++  I  +
Subjt:  GVEFNPSHEALLVDYLYNKVHGHPYCLEAVKDFDLYGNHEPWQVFD--LFGGVDGQDLYFFTQLKRKWPTKQDSSRISRRVGTNGGTWSGENSETPILSS

Query:  VTGGLIGFSKRFRYENGGLEH--HGEWIMKEFSL
          G  +G  K   +  G         WIM E+ L
Subjt:  VTGGLIGFSKRFRYENGGLEH--HGEWIMKEFSL

Q9LDY8 NAC domain-containing protein 552.2e-0732.09Show/hide
Query:  GVEFNPSHEALLVDYLYNKVHGHPYCLEAVKDFDLYGNHEPWQVFD--LFGGVDGQDLYFFTQLKRKWPTKQDSSRISRRVGTNGGTWSGENSETPILSS
        G  F P+ E L+V+YL  K  GH + L+ + + DLY   +PW +    LFG    ++ YFF+   RK+P   + SR +R  G+  G W    ++  I  S
Subjt:  GVEFNPSHEALLVDYLYNKVHGHPYCLEAVKDFDLYGNHEPWQVFD--LFGGVDGQDLYFFTQLKRKWPTKQDSSRISRRVGTNGGTWSGENSETPILSS

Query:  VTGGLIGFSKRFRYENGGLEH--HGEWIMKEFSL
          G  +G  K   +  G         WIM E+ L
Subjt:  VTGGLIGFSKRFRYENGGLEH--HGEWIMKEFSL

Q9LVA1 NAC domain-containing protein 1011.5e-0831.34Show/hide
Query:  GVEFNPSHEALLVDYLYNKVHGHPYCLEAVKDFDLYGNHEPWQVFDLFGGVDGQ--DLYFFTQLKRKWPTKQDSSRISRRVGTNGGTWSGENSETPILSS
        G  F+P+ E L+  YL NKV      ++ +KD DLY   EPW + +L G   G+  + YFF+   +K+PT   ++R      T  G W     +  I S 
Subjt:  GVEFNPSHEALLVDYLYNKVHGHPYCLEAVKDFDLYGNHEPWQVFDLFGGVDGQ--DLYFFTQLKRKWPTKQDSSRISRRVGTNGGTWSGENSETPILSS

Query:  VTGGLIGFSKRFRYENGGLEH--HGEWIMKEFSL
            L+G  K   +  G   +    +WIM E+ L
Subjt:  VTGGLIGFSKRFRYENGGLEH--HGEWIMKEFSL

Q9SQL0 NAC domain-containing protein JA21.3e-0732.58Show/hide
Query:  GVEFNPSHEALLVDYLYNKVHGHPYCLEAVKDFDLYGNHEPWQVFDLFGGVDGQDLYFFTQLKRKWPTKQDSSRISRRVGTNGGTWSGENSETPILSSVT
        G  F P+ E LLV YL  KV GH + L+ + + DLY   +PW V         ++ YFF+   RK+P   + SR +R  G+  G W    ++  I S   
Subjt:  GVEFNPSHEALLVDYLYNKVHGHPYCLEAVKDFDLYGNHEPWQVFDLFGGVDGQDLYFFTQLKRKWPTKQDSSRISRRVGTNGGTWSGENSETPILSSVT

Query:  GGLIGFSKRFRYENGGLEHHGE--WIMKEFSL
        G  +G  K   +  G      +  WIM E+ L
Subjt:  GGLIGFSKRFRYENGGLEHHGE--WIMKEFSL

Arabidopsis top hitse value%identityAlignment
AT2G24430.1 NAC domain containing protein 385.7e-1131.58Show/hide
Query:  GVEFNPSHEALLVDYLYNKVHGHPYCLEAVKDFDLYGNHEPWQVFDLFGGVDGQDLYFFTQLKRKWPTKQDSSRISRRVGTNGGTWSGENSETPILSSVT
        G  F+P+ E L+  YL NK+    +  +A+ D DL    EPW++ +    + G++ YFF+   RK+PT   ++R      TN G W     +  I +S T
Subjt:  GVEFNPSHEALLVDYLYNKVHGHPYCLEAVKDFDLYGNHEPWQVFDLFGGVDGQDLYFFTQLKRKWPTKQDSSRISRRVGTNGGTWSGENSETPILSSVT

Query:  GGLIGFSKRFRYENGGLEHHGE---WIMKEFSL
          L+G  K   +  G     GE   W+M E+ L
Subjt:  GGLIGFSKRFRYENGGLEHHGE---WIMKEFSL

AT2G24430.2 NAC domain containing protein 385.7e-1131.58Show/hide
Query:  GVEFNPSHEALLVDYLYNKVHGHPYCLEAVKDFDLYGNHEPWQVFDLFGGVDGQDLYFFTQLKRKWPTKQDSSRISRRVGTNGGTWSGENSETPILSSVT
        G  F+P+ E L+  YL NK+    +  +A+ D DL    EPW++ +    + G++ YFF+   RK+PT   ++R      TN G W     +  I +S T
Subjt:  GVEFNPSHEALLVDYLYNKVHGHPYCLEAVKDFDLYGNHEPWQVFDLFGGVDGQDLYFFTQLKRKWPTKQDSSRISRRVGTNGGTWSGENSETPILSSVT

Query:  GGLIGFSKRFRYENGGLEHHGE---WIMKEFSL
          L+G  K   +  G     GE   W+M E+ L
Subjt:  GGLIGFSKRFRYENGGLEHHGE---WIMKEFSL

AT3G15500.1 NAC domain containing protein 31.6e-0832.09Show/hide
Query:  GVEFNPSHEALLVDYLYNKVHGHPYCLEAVKDFDLYGNHEPWQVFD--LFGGVDGQDLYFFTQLKRKWPTKQDSSRISRRVGTNGGTWSGENSETPILSS
        G  F P+ E L+V+YL  K  GH + L+ + + DLY   +PW +    LFG    ++ YFF+   RK+P   + SR +R  G+  G W    ++  I  S
Subjt:  GVEFNPSHEALLVDYLYNKVHGHPYCLEAVKDFDLYGNHEPWQVFD--LFGGVDGQDLYFFTQLKRKWPTKQDSSRISRRVGTNGGTWSGENSETPILSS

Query:  VTGGLIGFSKRFRYENGGLEH--HGEWIMKEFSL
          G  +G  K   +  G         WIM E+ L
Subjt:  VTGGLIGFSKRFRYENGGLEH--HGEWIMKEFSL

AT4G27410.2 NAC (No Apical Meristem) domain transcriptional regulator superfamily protein1.6e-0832.84Show/hide
Query:  GVEFNPSHEALLVDYLYNKVHGHPYCLEAVKDFDLYGNHEPWQVFD--LFGGVDGQDLYFFTQLKRKWPTKQDSSRISRRVGTNGGTWSGENSETPILSS
        G  F P+ E LLV YL  KV G+ + L+ + D DLY   +PW +    LFG    ++ YFF+   RK+P   + SR +R  G+  G W    ++  I  +
Subjt:  GVEFNPSHEALLVDYLYNKVHGHPYCLEAVKDFDLYGNHEPWQVFD--LFGGVDGQDLYFFTQLKRKWPTKQDSSRISRRVGTNGGTWSGENSETPILSS

Query:  VTGGLIGFSKRFRYENGGLEH--HGEWIMKEFSL
          G  +G  K   +  G         WIM E+ L
Subjt:  VTGGLIGFSKRFRYENGGLEH--HGEWIMKEFSL

AT5G62380.1 NAC-domain protein 1011.1e-0931.34Show/hide
Query:  GVEFNPSHEALLVDYLYNKVHGHPYCLEAVKDFDLYGNHEPWQVFDLFGGVDGQ--DLYFFTQLKRKWPTKQDSSRISRRVGTNGGTWSGENSETPILSS
        G  F+P+ E L+  YL NKV      ++ +KD DLY   EPW + +L G   G+  + YFF+   +K+PT   ++R      T  G W     +  I S 
Subjt:  GVEFNPSHEALLVDYLYNKVHGHPYCLEAVKDFDLYGNHEPWQVFDLFGGVDGQ--DLYFFTQLKRKWPTKQDSSRISRRVGTNGGTWSGENSETPILSS

Query:  VTGGLIGFSKRFRYENGGLEH--HGEWIMKEFSL
            L+G  K   +  G   +    +WIM E+ L
Subjt:  VTGGLIGFSKRFRYENGGLEH--HGEWIMKEFSL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGCGACAGAGAAGAAGATTTGCATTCAATTTTTATGGATATGGAAATGGATAAGAAGTGTCCTTTTGGCATAAGAGGTGTTGAATTCAATCCGAGTCACGAAGCTCTGTT
GGTTGATTATCTTTACAACAAAGTACATGGCCACCCCTATTGTTTAGAAGCTGTCAAAGATTTCGACCTCTATGGCAACCATGAGCCATGGCAAGTTTTCGACCTGTTTG
GAGGAGTCGATGGCCAAGATCTCTACTTCTTCACCCAGCTCAAGAGGAAGTGGCCTACCAAACAAGACTCCTCTCGCATCAGCCGTCGAGTTGGTACCAATGGCGGTACT
TGGAGCGGTGAGAATTCTGAGACTCCCATTTTATCTTCCGTCACTGGTGGTCTTATTGGTTTCTCCAAACGCTTCCGTTATGAGAATGGTGGATTAGAACACCATGGTGA
GTGGATTATGAAAGAGTTTAGTTTG
mRNA sequenceShow/hide mRNA sequence
AGCGACAGAGAAGAAGATTTGCATTCAATTTTTATGGATATGGAAATGGATAAGAAGTGTCCTTTTGGCATAAGAGGTGTTGAATTCAATCCGAGTCACGAAGCTCTGTT
GGTTGATTATCTTTACAACAAAGTACATGGCCACCCCTATTGTTTAGAAGCTGTCAAAGATTTCGACCTCTATGGCAACCATGAGCCATGGCAAGTTTTCGACCTGTTTG
GAGGAGTCGATGGCCAAGATCTCTACTTCTTCACCCAGCTCAAGAGGAAGTGGCCTACCAAACAAGACTCCTCTCGCATCAGCCGTCGAGTTGGTACCAATGGCGGTACT
TGGAGCGGTGAGAATTCTGAGACTCCCATTTTATCTTCCGTCACTGGTGGTCTTATTGGTTTCTCCAAACGCTTCCGTTATGAGAATGGTGGATTAGAACACCATGGTGA
GTGGATTATGAAAGAGTTTAGTTTG
Protein sequenceShow/hide protein sequence
SDREEDLHSIFMDMEMDKKCPFGIRGVEFNPSHEALLVDYLYNKVHGHPYCLEAVKDFDLYGNHEPWQVFDLFGGVDGQDLYFFTQLKRKWPTKQDSSRISRRVGTNGGT
WSGENSETPILSSVTGGLIGFSKRFRYENGGLEHHGEWIMKEFSL