CuGenDBv2

Gene ID	MS023241
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	6,7-dimethyl-8-ribityllumazine synthase
Genome location	scaffold78:1282724..1285113
RNA-Seq Expression	MS023241
Synteny	MS023241
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0042229.1 uncharacterized protein E6C27_scaffold824G00020 [Cucumis melo var. makuwa]

2.4e-117

85.32

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Query:  SPYQSTAFPFHFHSLHSIN-LLPRTLFPAFGTEPTNTLKAFLHFHQT-SKKSHFSTFTSLTTTHASLIEAPILWAGRICIFYALLRAGFAGSQSNPLVSD
        SP QS+ FPFHFHSL+SIN LLP+TLFP F + P N L+ FLHFH+T S KS  +TF S ++T ASLIEAPILWAGR+CIFYALLRAG AGSQSNPL+SD
Subjt:  SPYQSTAFPFHFHSLHSIN-LLPRTLFPAFGTEPTNTLKAFLHFHQT-SKKSHFSTFTSLTTTHASLIEAPILWAGRICIFYALLRAGFAGSQSNPLVSD

Query:  LDVSYGGGADGGSGSDLGFSKWLESVRGKPVDEAADKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAIASLLSDDDHFIDATSHKGCQIRRESAHGE
        LD+SYGG +DG S SDLGFSKWLESVRGKPVDEA DKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAIASLLSDDDHF+DATSHKGCQIRRESAHGE
Subjt:  LDVSYGGGADGGSGSDLGFSKWLESVRGKPVDEAADKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAIASLLSDDDHFIDATSHKGCQIRRESAHGE

Query:  SVCCNNVRALFDELPTPHLIVEITPFPAGPLNQKDYTKAEKLERVLRSGPSV
        SVCCNNVRALFDELPTPHLIVEITPFPAGPLN+ DYTKAEKLERVLRSGPSV
Subjt:  SVCCNNVRALFDELPTPHLIVEITPFPAGPLNQKDYTKAEKLERVLRSGPSV

XP_004149017.1 uncharacterized protein LOC101215704 [Cucumis sativus]

6.0e-116

84.52

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Query:  SPYQSTAFPFHFHSLHSIN-LLPRTLFPAFGTEPTNTLKAFLHFHQT-SKKSHFSTFTSLTTTHASLIEAPILWAGRICIFYALLRAGFAGSQSNPLVSD
        SP QS+ FPFHFHSL+SIN LLP++LFP F + P N L  FLHFH+T S KS  +TF S ++T ASLIEAPILWAGR+CIFYALLRAG AGSQSNPL+SD
Subjt:  SPYQSTAFPFHFHSLHSIN-LLPRTLFPAFGTEPTNTLKAFLHFHQT-SKKSHFSTFTSLTTTHASLIEAPILWAGRICIFYALLRAGFAGSQSNPLVSD

Query:  LDVSYGGGADGGSGSDLGFSKWLESVRGKPVDEAADKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAIASLLSDDDHFIDATSHKGCQIRRESAHGE
        LD+SYGG +DG S SDLGFSKWLESVRGKPVDEA DKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAI SLLSDDDHF+DATSHKGCQIRRESAHGE
Subjt:  LDVSYGGGADGGSGSDLGFSKWLESVRGKPVDEAADKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAIASLLSDDDHFIDATSHKGCQIRRESAHGE

Query:  SVCCNNVRALFDELPTPHLIVEITPFPAGPLNQKDYTKAEKLERVLRSGPSV
        SVCCNNVRALFDELPTPHLIVEITPFPAGPLN+ DYTKAEKLERVLRSGPSV
Subjt:  SVCCNNVRALFDELPTPHLIVEITPFPAGPLNQKDYTKAEKLERVLRSGPSV

XP_008451102.1 PREDICTED: uncharacterized protein LOC103492482 [Cucumis melo]

2.4e-117

85.32

Show/hide

Query:  SPYQSTAFPFHFHSLHSIN-LLPRTLFPAFGTEPTNTLKAFLHFHQT-SKKSHFSTFTSLTTTHASLIEAPILWAGRICIFYALLRAGFAGSQSNPLVSD
        SP QS+ FPFHFHSL+SIN LLP+TLFP F + P N L+ FLHFH+T S KS  +TF S ++T ASLIEAPILWAGR+CIFYALLRAG AGSQSNPL+SD
Subjt:  SPYQSTAFPFHFHSLHSIN-LLPRTLFPAFGTEPTNTLKAFLHFHQT-SKKSHFSTFTSLTTTHASLIEAPILWAGRICIFYALLRAGFAGSQSNPLVSD

Query:  LDVSYGGGADGGSGSDLGFSKWLESVRGKPVDEAADKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAIASLLSDDDHFIDATSHKGCQIRRESAHGE
        LD+SYGG +DG S SDLGFSKWLESVRGKPVDEA DKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAIASLLSDDDHF+DATSHKGCQIRRESAHGE
Subjt:  LDVSYGGGADGGSGSDLGFSKWLESVRGKPVDEAADKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAIASLLSDDDHFIDATSHKGCQIRRESAHGE

Query:  SVCCNNVRALFDELPTPHLIVEITPFPAGPLNQKDYTKAEKLERVLRSGPSV
        SVCCNNVRALFDELPTPHLIVEITPFPAGPLN+ DYTKAEKLERVLRSGPSV
Subjt:  SVCCNNVRALFDELPTPHLIVEITPFPAGPLNQKDYTKAEKLERVLRSGPSV

XP_022157339.1 uncharacterized protein LOC111024066 [Momordica charantia]

3.5e-140

98.44

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Query:  VHTTFTSPYQSTAFPFHFHSLHSINLLPRTLFPAFGTEPTNTLKAFLHFHQTSKKSHFSTFTSLTTTHASLIEAPILWAGRICIFYALLRAGFAGSQSNP
        VHTTFTSPYQ TAFPFHFHSLHSINLLPRTLFPAFGTEPTNTLKAFLHFHQTSKKSHFSTFTSLTTT ASLIEAPILWAGRICIFYALLRAGFAGSQSNP
Subjt:  VHTTFTSPYQSTAFPFHFHSLHSINLLPRTLFPAFGTEPTNTLKAFLHFHQTSKKSHFSTFTSLTTTHASLIEAPILWAGRICIFYALLRAGFAGSQSNP

Query:  LVSDLDVSYGGGADGGSGSDLGFSKWLESVRGKPVDEAADKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAIASLLSDDDHFIDATSHKGCQIRRES
        LVSDLDVSYGGGA G SGSDLGFSKWLESVRGKPVDEAADKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAIASLLSDDDHFIDATSHKGCQIRRES
Subjt:  LVSDLDVSYGGGADGGSGSDLGFSKWLESVRGKPVDEAADKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAIASLLSDDDHFIDATSHKGCQIRRES

Query:  AHGESVCCNNVRALFDELPTPHLIVEITPFPAGPLNQKDYTKAEKLERVLRSGPSV
        AHGESVCCNNVRALFDELPTPHLIVEITPFPAGPLNQKDYTKAEKLERVLRSGPSV
Subjt:  AHGESVCCNNVRALFDELPTPHLIVEITPFPAGPLNQKDYTKAEKLERVLRSGPSV

XP_038878616.1 uncharacterized protein LOC120070805 [Benincasa hispida]

6.2e-121

88.49

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Query:  SPYQSTAFPFHFHSLHSIN-LLPRTLFPAFGTEPTNTLKAFLHFHQT-SKKSHFSTFTSLTTTHASLIEAPILWAGRICIFYALLRAGFAGSQSNPLVSD
        SPYQST FPF FHSLHSIN LLP+TLFP F T+  N LK FLHFH+T S KS  STF S ++THASLIEAPILWAGR+CIFYALLRAG AGSQSNPLVSD
Subjt:  SPYQSTAFPFHFHSLHSIN-LLPRTLFPAFGTEPTNTLKAFLHFHQT-SKKSHFSTFTSLTTTHASLIEAPILWAGRICIFYALLRAGFAGSQSNPLVSD

Query:  LDVSYGGGADGGSGSDLGFSKWLESVRGKPVDEAADKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAIASLLSDDDHFIDATSHKGCQIRRESAHGE
        LD+SYGG ADG S SDLGFSKWLESVRGKPVDEA DKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAIASLLSDDDHFIDATSHKGCQIRRESAHGE
Subjt:  LDVSYGGGADGGSGSDLGFSKWLESVRGKPVDEAADKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAIASLLSDDDHFIDATSHKGCQIRRESAHGE

Query:  SVCCNNVRALFDELPTPHLIVEITPFPAGPLNQKDYTKAEKLERVLRSGPSV
        SVCCNNVRALFDELPTPHLIVEITPFPAGPLN+ DYTKAEKLERVLRSGPSV
Subjt:  SVCCNNVRALFDELPTPHLIVEITPFPAGPLNQKDYTKAEKLERVLRSGPSV

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LX12 Uncharacterized protein

2.9e-116

84.52

Show/hide

Query:  SPYQSTAFPFHFHSLHSIN-LLPRTLFPAFGTEPTNTLKAFLHFHQT-SKKSHFSTFTSLTTTHASLIEAPILWAGRICIFYALLRAGFAGSQSNPLVSD
        SP QS+ FPFHFHSL+SIN LLP++LFP F + P N L  FLHFH+T S KS  +TF S ++T ASLIEAPILWAGR+CIFYALLRAG AGSQSNPL+SD
Subjt:  SPYQSTAFPFHFHSLHSIN-LLPRTLFPAFGTEPTNTLKAFLHFHQT-SKKSHFSTFTSLTTTHASLIEAPILWAGRICIFYALLRAGFAGSQSNPLVSD

Query:  LDVSYGGGADGGSGSDLGFSKWLESVRGKPVDEAADKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAIASLLSDDDHFIDATSHKGCQIRRESAHGE
        LD+SYGG +DG S SDLGFSKWLESVRGKPVDEA DKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAI SLLSDDDHF+DATSHKGCQIRRESAHGE
Subjt:  LDVSYGGGADGGSGSDLGFSKWLESVRGKPVDEAADKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAIASLLSDDDHFIDATSHKGCQIRRESAHGE

Query:  SVCCNNVRALFDELPTPHLIVEITPFPAGPLNQKDYTKAEKLERVLRSGPSV
        SVCCNNVRALFDELPTPHLIVEITPFPAGPLN+ DYTKAEKLERVLRSGPSV
Subjt:  SVCCNNVRALFDELPTPHLIVEITPFPAGPLNQKDYTKAEKLERVLRSGPSV

A0A1S3BQQ9 uncharacterized protein LOC103492482

1.2e-117

85.32

Show/hide

Query:  SPYQSTAFPFHFHSLHSIN-LLPRTLFPAFGTEPTNTLKAFLHFHQT-SKKSHFSTFTSLTTTHASLIEAPILWAGRICIFYALLRAGFAGSQSNPLVSD
        SP QS+ FPFHFHSL+SIN LLP+TLFP F + P N L+ FLHFH+T S KS  +TF S ++T ASLIEAPILWAGR+CIFYALLRAG AGSQSNPL+SD
Subjt:  SPYQSTAFPFHFHSLHSIN-LLPRTLFPAFGTEPTNTLKAFLHFHQT-SKKSHFSTFTSLTTTHASLIEAPILWAGRICIFYALLRAGFAGSQSNPLVSD

Query:  LDVSYGGGADGGSGSDLGFSKWLESVRGKPVDEAADKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAIASLLSDDDHFIDATSHKGCQIRRESAHGE
        LD+SYGG +DG S SDLGFSKWLESVRGKPVDEA DKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAIASLLSDDDHF+DATSHKGCQIRRESAHGE
Subjt:  LDVSYGGGADGGSGSDLGFSKWLESVRGKPVDEAADKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAIASLLSDDDHFIDATSHKGCQIRRESAHGE

Query:  SVCCNNVRALFDELPTPHLIVEITPFPAGPLNQKDYTKAEKLERVLRSGPSV
        SVCCNNVRALFDELPTPHLIVEITPFPAGPLN+ DYTKAEKLERVLRSGPSV
Subjt:  SVCCNNVRALFDELPTPHLIVEITPFPAGPLNQKDYTKAEKLERVLRSGPSV

A0A5A7TLK8 Uncharacterized protein

1.2e-117

85.32

Show/hide

Query:  SPYQSTAFPFHFHSLHSIN-LLPRTLFPAFGTEPTNTLKAFLHFHQT-SKKSHFSTFTSLTTTHASLIEAPILWAGRICIFYALLRAGFAGSQSNPLVSD
        SP QS+ FPFHFHSL+SIN LLP+TLFP F + P N L+ FLHFH+T S KS  +TF S ++T ASLIEAPILWAGR+CIFYALLRAG AGSQSNPL+SD
Subjt:  SPYQSTAFPFHFHSLHSIN-LLPRTLFPAFGTEPTNTLKAFLHFHQT-SKKSHFSTFTSLTTTHASLIEAPILWAGRICIFYALLRAGFAGSQSNPLVSD

Query:  LDVSYGGGADGGSGSDLGFSKWLESVRGKPVDEAADKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAIASLLSDDDHFIDATSHKGCQIRRESAHGE
        LD+SYGG +DG S SDLGFSKWLESVRGKPVDEA DKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAIASLLSDDDHF+DATSHKGCQIRRESAHGE
Subjt:  LDVSYGGGADGGSGSDLGFSKWLESVRGKPVDEAADKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAIASLLSDDDHFIDATSHKGCQIRRESAHGE

Query:  SVCCNNVRALFDELPTPHLIVEITPFPAGPLNQKDYTKAEKLERVLRSGPSV
        SVCCNNVRALFDELPTPHLIVEITPFPAGPLN+ DYTKAEKLERVLRSGPSV
Subjt:  SVCCNNVRALFDELPTPHLIVEITPFPAGPLNQKDYTKAEKLERVLRSGPSV

A0A6J1DW78 uncharacterized protein LOC111024066

1.7e-140

98.44

Show/hide

Query:  VHTTFTSPYQSTAFPFHFHSLHSINLLPRTLFPAFGTEPTNTLKAFLHFHQTSKKSHFSTFTSLTTTHASLIEAPILWAGRICIFYALLRAGFAGSQSNP
        VHTTFTSPYQ TAFPFHFHSLHSINLLPRTLFPAFGTEPTNTLKAFLHFHQTSKKSHFSTFTSLTTT ASLIEAPILWAGRICIFYALLRAGFAGSQSNP
Subjt:  VHTTFTSPYQSTAFPFHFHSLHSINLLPRTLFPAFGTEPTNTLKAFLHFHQTSKKSHFSTFTSLTTTHASLIEAPILWAGRICIFYALLRAGFAGSQSNP

Query:  LVSDLDVSYGGGADGGSGSDLGFSKWLESVRGKPVDEAADKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAIASLLSDDDHFIDATSHKGCQIRRES
        LVSDLDVSYGGGA G SGSDLGFSKWLESVRGKPVDEAADKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAIASLLSDDDHFIDATSHKGCQIRRES
Subjt:  LVSDLDVSYGGGADGGSGSDLGFSKWLESVRGKPVDEAADKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAIASLLSDDDHFIDATSHKGCQIRRES

Query:  AHGESVCCNNVRALFDELPTPHLIVEITPFPAGPLNQKDYTKAEKLERVLRSGPSV
        AHGESVCCNNVRALFDELPTPHLIVEITPFPAGPLNQKDYTKAEKLERVLRSGPSV
Subjt:  AHGESVCCNNVRALFDELPTPHLIVEITPFPAGPLNQKDYTKAEKLERVLRSGPSV

A0A6J1JIW4 uncharacterized protein LOC111485505

1.1e-115

83.59

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Query:  VHTTFTSPYQSTAFPFHFHSLHSINLLPRTLFPAFGTEPTNTLKAFLHFHQTSKKSHFSTFTSLTTTHASLIEAPILWAGRICIFYALLRAGFAGSQSNP
        VHTTFTSPYQS  FPF F +LHSINL P T    FG++  N LK FL+FH    K   +TF S TT  ASLIEAPILWAGR+CIFYALL+AG AGSQSNP
Subjt:  VHTTFTSPYQSTAFPFHFHSLHSINLLPRTLFPAFGTEPTNTLKAFLHFHQTSKKSHFSTFTSLTTTHASLIEAPILWAGRICIFYALLRAGFAGSQSNP

Query:  LVSDLDVSYGGGADGGSGSDLGFSKWLESVRGKPVDEAADKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAIASLLSDDDHFIDATSHKGCQIRRES
        LVSDL++S GG ADG S SDLGFSKWLESVRGKPVDEA DKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAIASLLSDDDHFIDATSHKGCQIRRES
Subjt:  LVSDLDVSYGGGADGGSGSDLGFSKWLESVRGKPVDEAADKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAIASLLSDDDHFIDATSHKGCQIRRES

Query:  AHGESVCCNNVRALFDELPTPHLIVEITPFPAGPLNQKDYTKAEKLERVLRSGPSV
        AHGESVCCNNVRALFDELPTPHLIVEITPFPAGPLN+ DYTKAEKLERVLRSGPSV
Subjt:  AHGESVCCNNVRALFDELPTPHLIVEITPFPAGPLNQKDYTKAEKLERVLRSGPSV

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G32930.1 unknown protein

1.3e-84

77.6

Show/hide

Query:  TTHASLIEAPILWAGRICIFYALLRAGFAGSQSNPLVSDLDVSYGGGADGGSGSDLGFSKWLESVRG-KPVDEAADKRKLVSKWHPTTKGTLRRNYRVPS
        +T ASL+E PILWAGRIC+FYAL++AGFAGS+SNP+VS LD   G   +   G+DLGFSKWL++++G KP  +AADKRKLVSKWHPTTKGTLRRNYR+PS
Subjt:  TTHASLIEAPILWAGRICIFYALLRAGFAGSQSNPLVSDLDVSYGGGADGGSGSDLGFSKWLESVRG-KPVDEAADKRKLVSKWHPTTKGTLRRNYRVPS

Query:  KSEGRRLLKAIASLLSDDDHFIDATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLIVEITPFPAGPLNQKDYTKAEKLERVLRSGPSV
        K+EG RLLKAIASLLSDDDHF DATSHKGCQIRRESAHG+SVCCNNVRALFDELPTPHL+VEITPFPAGPL + DY KAEKLER+LRSG ++
Subjt:  KSEGRRLLKAIASLLSDDDHFIDATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLIVEITPFPAGPLNQKDYTKAEKLERVLRSGPSV

Sequences

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CDS sequence

Show/hide CDS sequence

GTACACACCACCTTCACTTCTCCATACCAATCCACCGCCTTCCCCTTCCATTTTCACAGCCTCCATTCCATCAATTTGCTCCCCAGAACTCTGTTTCCTGCTTTTGGAAC
CGAACCCACAAATACCCTCAAAGCATTTCTCCACTTTCACCAAACATCGAAGAAATCCCACTTCAGTACATTCACCTCACTCACCACCACTCATGCTTCTCTTATCGAGG
CCCCAATTTTGTGGGCTGGTAGAATTTGCATCTTCTACGCCCTCTTGAGAGCTGGTTTCGCTGGATCTCAATCCAACCCTCTTGTCTCAGATTTGGATGTTTCCTATGGT
GGTGGTGCTGATGGGGGAAGTGGCAGTGATTTGGGGTTTTCTAAGTGGCTGGAGAGTGTTAGAGGGAAGCCAGTGGATGAAGCAGCTGATAAAAGGAAACTAGTGAGCAA
ATGGCATCCTACCACGAAGGGCACTCTTCGGAGGAATTATCGGGTGCCTTCTAAATCCGAAGGACGACGACTTCTTAAAGCCATTGCATCCCTGCTTTCTGACGACGATC
ACTTCATCGACGCCACTTCACACAAGGGCTGCCAAATCAGGAGGGAAAGTGCTCATGGAGAGAGTGTTTGCTGTAACAATGTGAGAGCTCTGTTTGATGAGCTTCCAACT
CCACATCTTATTGTGGAAATAACTCCATTCCCTGCTGGGCCTCTCAATCAAAAGGATTACACCAAGGCTGAGAAACTAGAGAGAGTGCTCAGATCTGGCCCCTCTGTT

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

VHTTFTSPYQSTAFPFHFHSLHSINLLPRTLFPAFGTEPTNTLKAFLHFHQTSKKSHFSTFTSLTTTHASLIEAPILWAGRICIFYALLRAGFAGSQSNPLVSDLDVSYG
GGADGGSGSDLGFSKWLESVRGKPVDEAADKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAIASLLSDDDHFIDATSHKGCQIRRESAHGESVCCNNVRALFDELPT
PHLIVEITPFPAGPLNQKDYTKAEKLERVLRSGPSV

MS023241 (gene) of Bitter gourd (TR) v1 genome