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MS023249 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS023249
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionF-box protein At3g07870-like
Genome locationscaffold78:1438339..1438530
RNA-Seq ExpressionMS023249
SyntenyMS023249
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004135796.1 putative F-box protein At1g46984 [Cucumis sativus]1.6e-0954.69Show/hide
Query:  VCKAWNNLVLTCKFHSPISISNHFFFARCYQSFDRNLHCITLDSKHMREMSSVAKFSFHPDFFS
        V   WNNL+ +CKF   ISIS H FFAR Y S   NLHC+  D +H   MS+VA F+FHPD  S
Subjt:  VCKAWNNLVLTCKFHSPISISNHFFFARCYQSFDRNLHCITLDSKHMREMSSVAKFSFHPDFFS

XP_008450717.1 PREDICTED: putative F-box protein At3g21120 [Cucumis melo]5.5e-1054.69Show/hide
Query:  VCKAWNNLVLTCKFHSPISISNHFFFARCYQSFDRNLHCITLDSKHMREMSSVAKFSFHPDFFS
        V + WNNL+ +CKF    SI  H FFAR Y S  RNLHC+  D +H+  MS VA F+FHPDF S
Subjt:  VCKAWNNLVLTCKFHSPISISNHFFFARCYQSFDRNLHCITLDSKHMREMSSVAKFSFHPDFFS

XP_022132431.1 F-box protein At3g07870-like [Momordica charantia]2.7e-0954.69Show/hide
Query:  VCKAWNNLVLTCKFHSPISISNHFFFARCYQSFDRNLHCITLDSKHMREMSSVAKFSFHPDFFS
        VCKAWNN +LTCK HS IS SN F+    + S    L C+ LD KH+  +SS+  FSFHPD FS
Subjt:  VCKAWNNLVLTCKFHSPISISNHFFFARCYQSFDRNLHCITLDSKHMREMSSVAKFSFHPDFFS

XP_022143297.1 F-box/kelch-repeat protein At3g06240-like [Momordica charantia]1.4e-1059.68Show/hide
Query:  VCKAWNNLVLTCKFHSPISISNHFFFARCYQSFDRNLHCITLDSKHMREMSSVAKFSFHPDF
        VCKAW+++VLT K H  ISISNH F A  Y  FD NL C+ LD K++  M +VAKF FHPDF
Subjt:  VCKAWNNLVLTCKFHSPISISNHFFFARCYQSFDRNLHCITLDSKHMREMSSVAKFSFHPDF

XP_038880514.1 putative F-box protein At1g46984 [Benincasa hispida]8.4e-1157.81Show/hide
Query:  VCKAWNNLVLTCKFHSPISISNHFFFARCYQSFDRNLHCITLDSKHMREMSSVAKFSFHPDFFS
        V   WNNLVL+CKF   ISISN  FFA  Y   DRNLHC+ LD +H+  MS+VA F+FHP+  S
Subjt:  VCKAWNNLVLTCKFHSPISISNHFFFARCYQSFDRNLHCITLDSKHMREMSSVAKFSFHPDFFS

TrEMBL top hitse value%identityAlignment
A0A0A0M1M5 F-box domain-containing protein7.7e-1054.69Show/hide
Query:  VCKAWNNLVLTCKFHSPISISNHFFFARCYQSFDRNLHCITLDSKHMREMSSVAKFSFHPDFFS
        V   WNNL+ +CKF   ISIS H FFAR Y S   NLHC+  D +H   MS+VA F+FHPD  S
Subjt:  VCKAWNNLVLTCKFHSPISISNHFFFARCYQSFDRNLHCITLDSKHMREMSSVAKFSFHPDFFS

A0A1S3BQV8 putative F-box protein At3g211202.7e-1054.69Show/hide
Query:  VCKAWNNLVLTCKFHSPISISNHFFFARCYQSFDRNLHCITLDSKHMREMSSVAKFSFHPDFFS
        V + WNNL+ +CKF    SI  H FFAR Y S  RNLHC+  D +H+  MS VA F+FHPDF S
Subjt:  VCKAWNNLVLTCKFHSPISISNHFFFARCYQSFDRNLHCITLDSKHMREMSSVAKFSFHPDFFS

A0A5D3CIX9 Putative F-box protein2.7e-1054.69Show/hide
Query:  VCKAWNNLVLTCKFHSPISISNHFFFARCYQSFDRNLHCITLDSKHMREMSSVAKFSFHPDFFS
        V + WNNL+ +CKF    SI  H FFAR Y S  RNLHC+  D +H+  MS VA F+FHPDF S
Subjt:  VCKAWNNLVLTCKFHSPISISNHFFFARCYQSFDRNLHCITLDSKHMREMSSVAKFSFHPDFFS

A0A6J1BS93 F-box protein At3g07870-like1.3e-0954.69Show/hide
Query:  VCKAWNNLVLTCKFHSPISISNHFFFARCYQSFDRNLHCITLDSKHMREMSSVAKFSFHPDFFS
        VCKAWNN +LTCK HS IS SN F+    + S    L C+ LD KH+  +SS+  FSFHPD FS
Subjt:  VCKAWNNLVLTCKFHSPISISNHFFFARCYQSFDRNLHCITLDSKHMREMSSVAKFSFHPDFFS

A0A6J1CQE2 F-box/kelch-repeat protein At3g06240-like7.0e-1159.68Show/hide
Query:  VCKAWNNLVLTCKFHSPISISNHFFFARCYQSFDRNLHCITLDSKHMREMSSVAKFSFHPDF
        VCKAW+++VLT K H  ISISNH F A  Y  FD NL C+ LD K++  M +VAKF FHPDF
Subjt:  VCKAWNNLVLTCKFHSPISISNHFFFARCYQSFDRNLHCITLDSKHMREMSSVAKFSFHPDF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTGTGTAAAGCATGGAACAATCTGGTCTTAACTTGTAAGTTTCATTCTCCCATCTCAATTTCCAACCACTTCTTTTTTGCCCGTTGTTATCAGTCGTTTGATCGCAATCT
CCATTGCATAACCTTGGATTCTAAACATATGAGAGAGATGAGCAGTGTTGCCAAATTTAGTTTCCATCCTGATTTTTTTTCT
mRNA sequenceShow/hide mRNA sequence
GTGTGTAAAGCATGGAACAATCTGGTCTTAACTTGTAAGTTTCATTCTCCCATCTCAATTTCCAACCACTTCTTTTTTGCCCGTTGTTATCAGTCGTTTGATCGCAATCT
CCATTGCATAACCTTGGATTCTAAACATATGAGAGAGATGAGCAGTGTTGCCAAATTTAGTTTCCATCCTGATTTTTTTTCT
Protein sequenceShow/hide protein sequence
VCKAWNNLVLTCKFHSPISISNHFFFARCYQSFDRNLHCITLDSKHMREMSSVAKFSFHPDFFS