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MS023268 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS023268
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionzf-RVT domain-containing protein
Genome locationscaffold78:1586192..1586443
RNA-Seq ExpressionMS023268
SyntenyMS023268
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057642.1 reverse transcriptase [Cucumis melo var. makuwa]4.2e-1039.02Show/hide
Query:  GLKSRNHLFFECSFSSEVWYDMIVWAGSSDRVLYWSTELTCIYHISASKSACRHVWRLTWTSTVSFIWRKRNASCRWGASVD
        G++SR+HLFF C F  +VW  ++    SS R+ +W  EL+ I H    K   R +WR+ W +T+ FIW +RN     G + D
Subjt:  GLKSRNHLFFECSFSSEVWYDMIVWAGSSDRVLYWSTELTCIYHISASKSACRHVWRLTWTSTVSFIWRKRNASCRWGASVD

XP_008452126.1 PREDICTED: uncharacterized protein LOC103493225 [Cucumis melo]4.2e-1039.02Show/hide
Query:  GLKSRNHLFFECSFSSEVWYDMIVWAGSSDRVLYWSTELTCIYHISASKSACRHVWRLTWTSTVSFIWRKRNASCRWGASVD
        G++SR+HLFF C F  +VW  ++    SS R+ +W  EL+ I H    K   R +WR+ W +T+ FIW +RN     G + D
Subjt:  GLKSRNHLFFECSFSSEVWYDMIVWAGSSDRVLYWSTELTCIYHISASKSACRHVWRLTWTSTVSFIWRKRNASCRWGASVD

XP_022158861.1 uncharacterized protein LOC111025324 [Momordica charantia]4.2e-1861.11Show/hide
Query:  GLKSRNHLFFECSFSSEVWYDMIVWAGSSDRVLYWSTELTCIYHISASKSACRHVWRLTWTSTVSFIWRKRN
        GL+SR+HLF +C +S  VW  MI WAGSS RV YWSTELT I H++   S+ RHVWRL WT TVS +WR+ N
Subjt:  GLKSRNHLFFECSFSSEVWYDMIVWAGSSDRVLYWSTELTCIYHISASKSACRHVWRLTWTSTVSFIWRKRN

XP_031745517.1 uncharacterized protein LOC116405878 [Cucumis sativus]1.4e-1042.86Show/hide
Query:  KSRNHLFFECSFSSEVWYDMIVWAGSSDRVLYWSTELTCIYHISASKSACRHVWRLTWTSTVSFIWRKRNASCRWGA
        +SR+HLFF C F  E+W  +++   SS R  YW  EL+ IY+    KS  R +WRL W +T+ FIW++RN     G+
Subjt:  KSRNHLFFECSFSSEVWYDMIVWAGSSDRVLYWSTELTCIYHISASKSACRHVWRLTWTSTVSFIWRKRNASCRWGA

XP_031745548.1 uncharacterized protein LOC116405965 [Cucumis sativus]1.9e-1042.86Show/hide
Query:  KSRNHLFFECSFSSEVWYDMIVWAGSSDRVLYWSTELTCIYHISASKSACRHVWRLTWTSTVSFIWRKRNASCRWGA
        +SR+HLFF C F  E+W  +++   SS R+ YW   L+ IY+    KS  R +WRL W +T+ FIW++RN     GA
Subjt:  KSRNHLFFECSFSSEVWYDMIVWAGSSDRVLYWSTELTCIYHISASKSACRHVWRLTWTSTVSFIWRKRNASCRWGA

TrEMBL top hitse value%identityAlignment
A0A1S3BSI8 uncharacterized protein LOC1034932252.0e-1039.02Show/hide
Query:  GLKSRNHLFFECSFSSEVWYDMIVWAGSSDRVLYWSTELTCIYHISASKSACRHVWRLTWTSTVSFIWRKRNASCRWGASVD
        G++SR+HLFF C F  +VW  ++    SS R+ +W  EL+ I H    K   R +WR+ W +T+ FIW +RN     G + D
Subjt:  GLKSRNHLFFECSFSSEVWYDMIVWAGSSDRVLYWSTELTCIYHISASKSACRHVWRLTWTSTVSFIWRKRNASCRWGASVD

A0A5A7UP65 Reverse transcriptase2.0e-1039.02Show/hide
Query:  GLKSRNHLFFECSFSSEVWYDMIVWAGSSDRVLYWSTELTCIYHISASKSACRHVWRLTWTSTVSFIWRKRNASCRWGASVD
        G++SR+HLFF C F  +VW  ++    SS R+ +W  EL+ I H    K   R +WR+ W +T+ FIW +RN     G + D
Subjt:  GLKSRNHLFFECSFSSEVWYDMIVWAGSSDRVLYWSTELTCIYHISASKSACRHVWRLTWTSTVSFIWRKRNASCRWGASVD

A0A5A7VG93 Uncharacterized protein3.5e-1039.02Show/hide
Query:  GLKSRNHLFFECSFSSEVWYDMIVWAGSSDRVLYWSTELTCIYHISASKSACRHVWRLTWTSTVSFIWRKRNASCRWGASVD
        G++SR+HLFF C F  +VW  ++    SS R+  W  EL+ I+H    K   R +WR+ W +T+ FIW +RN     G + D
Subjt:  GLKSRNHLFFECSFSSEVWYDMIVWAGSSDRVLYWSTELTCIYHISASKSACRHVWRLTWTSTVSFIWRKRNASCRWGASVD

A0A5D3D7P6 Reverse transcriptase2.0e-1039.02Show/hide
Query:  GLKSRNHLFFECSFSSEVWYDMIVWAGSSDRVLYWSTELTCIYHISASKSACRHVWRLTWTSTVSFIWRKRNASCRWGASVD
        G++SR+HLFF C F  +VW  ++    SS R+ +W  EL+ I H    K   R +WR+ W +T+ FIW +RN     G + D
Subjt:  GLKSRNHLFFECSFSSEVWYDMIVWAGSSDRVLYWSTELTCIYHISASKSACRHVWRLTWTSTVSFIWRKRNASCRWGASVD

A0A6J1E271 uncharacterized protein LOC1110253242.0e-1861.11Show/hide
Query:  GLKSRNHLFFECSFSSEVWYDMIVWAGSSDRVLYWSTELTCIYHISASKSACRHVWRLTWTSTVSFIWRKRN
        GL+SR+HLF +C +S  VW  MI WAGSS RV YWSTELT I H++   S+ RHVWRL WT TVS +WR+ N
Subjt:  GLKSRNHLFFECSFSSEVWYDMIVWAGSSDRVLYWSTELTCIYHISASKSACRHVWRLTWTSTVSFIWRKRN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GGCTTGAAGTCCAGGAATCATTTATTCTTTGAGTGCTCATTTAGTTCGGAGGTATGGTATGACATGATTGTTTGGGCTGGTTCTTCTGACCGGGTTTTATATTGGTCTAC
CGAGCTTACTTGTATCTATCACATTAGTGCTAGTAAGTCTGCTTGTCGTCATGTATGGCGCTTGACATGGACTTCGACTGTTTCTTTTATCTGGAGGAAGCGTAATGCTT
CATGCAGGTGGGGTGCGTCAGTTGACTTCTAT
mRNA sequenceShow/hide mRNA sequence
GGCTTGAAGTCCAGGAATCATTTATTCTTTGAGTGCTCATTTAGTTCGGAGGTATGGTATGACATGATTGTTTGGGCTGGTTCTTCTGACCGGGTTTTATATTGGTCTAC
CGAGCTTACTTGTATCTATCACATTAGTGCTAGTAAGTCTGCTTGTCGTCATGTATGGCGCTTGACATGGACTTCGACTGTTTCTTTTATCTGGAGGAAGCGTAATGCTT
CATGCAGGTGGGGTGCGTCAGTTGACTTCTAT
Protein sequenceShow/hide protein sequence
GLKSRNHLFFECSFSSEVWYDMIVWAGSSDRVLYWSTELTCIYHISASKSACRHVWRLTWTSTVSFIWRKRNASCRWGASVDFY