; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS023269 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS023269
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionSelenoprotein O
Genome locationscaffold78:1591586..1591996
RNA-Seq ExpressionMS023269
SyntenyMS023269
Gene Ontology termsGO:0005524 - ATP binding (molecular function)
GO:0016779 - nucleotidyltransferase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR003846 - Protein adenylyltransferase SelO


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6590231.1 hypothetical protein SDJN03_15654, partial [Cucurbita argyrosperma subsp. sororia]4.0e-4271.94Show/hide
Query:  MSLRSHFFPKLSLLPHISLLCHG--HRLGLVRRPSSLLI-RTSSSSLVSPPPPLAGHFGHRRRRVSMDSTSPEVSVSVSVDSVAQDLKNQSLNSDDHEHE
        MSL SH FPKLSLLPHISLLCHG  HRLGLVRR S+ LI R   +S+ SPP PL GH  H RRRVSMDS SPE  VS SVDSVA  LKNQSLNSDD    
Subjt:  MSLRSHFFPKLSLLPHISLLCHG--HRLGLVRRPSSLLI-RTSSSSLVSPPPPLAGHFGHRRRRVSMDSTSPEVSVSVSVDSVAQDLKNQSLNSDDHEHE

Query:  GSSLKNKVKKKLEDLNWDNSFVRELPGDPRTDIIPREVL
        GS +++  KKKLE+LNWDNSFVRELPGDPRTD++PR+VL
Subjt:  GSSLKNKVKKKLEDLNWDNSFVRELPGDPRTDIIPREVL

XP_022154095.1 uncharacterized protein LOC111021431 [Momordica charantia]5.5e-6899.26Show/hide
Query:  MSLRSHFFPKLSLLPHISLLCHGHRLGLVRRPSSLLIRTSSSSLVSPPPPLAGHFGHRRRRVSMDSTSPEVSVSVSVDSVAQDLKNQSLNSDDHEHEGSS
        MSLRSHFFPKLSLLPHISLLCHGHRLGLVRRPSSLLIRTSSSSLVSPPPPLAGHFGHRRRRVSMDS SPEVSVSVSVDSVAQDLKNQSLNSDDHEHEGSS
Subjt:  MSLRSHFFPKLSLLPHISLLCHGHRLGLVRRPSSLLIRTSSSSLVSPPPPLAGHFGHRRRRVSMDSTSPEVSVSVSVDSVAQDLKNQSLNSDDHEHEGSS

Query:  LKNKVKKKLEDLNWDNSFVRELPGDPRTDIIPREVL
        LKNKVKKKLEDLNWDNSFVRELPGDPRTDIIPREVL
Subjt:  LKNKVKKKLEDLNWDNSFVRELPGDPRTDIIPREVL

XP_022960705.1 uncharacterized protein LOC111461421 [Cucurbita moschata]3.4e-4171.22Show/hide
Query:  MSLRSHFFPKLSLLPHISLLCHG--HRLGLVRRPSSLLI-RTSSSSLVSPPPPLAGHFGHRRRRVSMDSTSPEVSVSVSVDSVAQDLKNQSLNSDDHEHE
        MSL SH FPKLSLLPHISLLCHG  HRLGLVRR S+ LI R   +S+ S P PL GH  H RRRVSMDS SPE  VS SVDSVA  LKNQSLNSDD    
Subjt:  MSLRSHFFPKLSLLPHISLLCHG--HRLGLVRRPSSLLI-RTSSSSLVSPPPPLAGHFGHRRRRVSMDSTSPEVSVSVSVDSVAQDLKNQSLNSDDHEHE

Query:  GSSLKNKVKKKLEDLNWDNSFVRELPGDPRTDIIPREVL
        GS +++  KKKLE+LNWDNSFVRELPGDPRTD++PR+VL
Subjt:  GSSLKNKVKKKLEDLNWDNSFVRELPGDPRTDIIPREVL

XP_023516247.1 uncharacterized protein LOC111780158 [Cucurbita pepo subsp. pepo]1.8e-4271.63Show/hide
Query:  MSLRSHFFPKLSLLPHISLLCHG----HRLGLVRRPSSLLI-RTSSSSLVSPPPPLAGHFGHRRRRVSMDSTSPEVSVSVSVDSVAQDLKNQSLNSDDHE
        MSL SH FPKLSLLPHISLLCHG    HRLGLVRR S+ LI R S +S+ SPP PL GH  H RRRVSMDS SPE  VS SVDSVA  LKNQSLNSDD  
Subjt:  MSLRSHFFPKLSLLPHISLLCHG----HRLGLVRRPSSLLI-RTSSSSLVSPPPPLAGHFGHRRRRVSMDSTSPEVSVSVSVDSVAQDLKNQSLNSDDHE

Query:  HEGSSLKNKVKKKLEDLNWDNSFVRELPGDPRTDIIPREVL
          GS +++  KKKLE+LNWDNSFVRELPGDPRTD++PR+VL
Subjt:  HEGSSLKNKVKKKLEDLNWDNSFVRELPGDPRTDIIPREVL

XP_038878878.1 protein adenylyltransferase SelO [Benincasa hispida]7.8e-4676.64Show/hide
Query:  MSLRSHFFPKLSLLPHISLLCHGHRLGLVRRPSSLLI-RTSSSSLVSPPPPLAGHFGHRRRRVSMDSTSPEVSVSVSVDSVAQDLKNQSLNSDDHEHEGS
        MSL SH FPKLS+LPHISLLCHGHRLGLVRR S+LLI R   +S +SPP PLAGH  H RRRVSMDS SPE  VS SVDSVA+ LKNQSLNSD+    GS
Subjt:  MSLRSHFFPKLSLLPHISLLCHGHRLGLVRRPSSLLI-RTSSSSLVSPPPPLAGHFGHRRRRVSMDSTSPEVSVSVSVDSVAQDLKNQSLNSDDHEHEGS

Query:  SLKNKVKKKLEDLNWDNSFVRELPGDPRTDIIPREVL
        S+K++ KKKLEDLNWDNSFVRELPGDPR DIIPREVL
Subjt:  SLKNKVKKKLEDLNWDNSFVRELPGDPRTDIIPREVL

TrEMBL top hitse value%identityAlignment
A0A0A0LXE5 Selenoprotein O3.1e-4070.07Show/hide
Query:  MSLRSHFFPKLSLLPHISLLCHGHRLGLVRRPSSLLIRT-SSSSLVSPPPPLAGHFGHRRRRVSMDSTSPEVSVSVSVDSVAQDLKNQSLNSDDHEHEGS
        MSL SH FPK S+  +ISLLCHGHRLGLVRR S+LLIR    +S  S P PL  H  H RR++SMDS SPE  VS SVDSVA+ LKNQSLN+DD    GS
Subjt:  MSLRSHFFPKLSLLPHISLLCHGHRLGLVRRPSSLLIRT-SSSSLVSPPPPLAGHFGHRRRRVSMDSTSPEVSVSVSVDSVAQDLKNQSLNSDDHEHEGS

Query:  SLKNKVKKKLEDLNWDNSFVRELPGDPRTDIIPREVL
        S+ +  KKKLEDLNWDNSFVRELPGDPRTDIIPREVL
Subjt:  SLKNKVKKKLEDLNWDNSFVRELPGDPRTDIIPREVL

A0A5D3DUC9 Selenoprotein O2.4e-4070.8Show/hide
Query:  MSLRSHFFPKLSLLPHISLLCHGHRLGLVRRPSSLLIRT-SSSSLVSPPPPLAGHFGHRRRRVSMDSTSPEVSVSVSVDSVAQDLKNQSLNSDDHEHEGS
        MSL SH FPK S+  +ISLLCHGHRLGLV R S+LLIR  S SS  S P PL  H  H RR++SMDS SPE  VS SVDSVA+ LKNQSLN+DD    GS
Subjt:  MSLRSHFFPKLSLLPHISLLCHGHRLGLVRRPSSLLIRT-SSSSLVSPPPPLAGHFGHRRRRVSMDSTSPEVSVSVSVDSVAQDLKNQSLNSDDHEHEGS

Query:  SLKNKVKKKLEDLNWDNSFVRELPGDPRTDIIPREVL
        S+ +  KKKLEDLNWDNSFVRELPGDPRTDIIPREVL
Subjt:  SLKNKVKKKLEDLNWDNSFVRELPGDPRTDIIPREVL

A0A6J1DIN2 Selenoprotein O2.7e-6899.26Show/hide
Query:  MSLRSHFFPKLSLLPHISLLCHGHRLGLVRRPSSLLIRTSSSSLVSPPPPLAGHFGHRRRRVSMDSTSPEVSVSVSVDSVAQDLKNQSLNSDDHEHEGSS
        MSLRSHFFPKLSLLPHISLLCHGHRLGLVRRPSSLLIRTSSSSLVSPPPPLAGHFGHRRRRVSMDS SPEVSVSVSVDSVAQDLKNQSLNSDDHEHEGSS
Subjt:  MSLRSHFFPKLSLLPHISLLCHGHRLGLVRRPSSLLIRTSSSSLVSPPPPLAGHFGHRRRRVSMDSTSPEVSVSVSVDSVAQDLKNQSLNSDDHEHEGSS

Query:  LKNKVKKKLEDLNWDNSFVRELPGDPRTDIIPREVL
        LKNKVKKKLEDLNWDNSFVRELPGDPRTDIIPREVL
Subjt:  LKNKVKKKLEDLNWDNSFVRELPGDPRTDIIPREVL

A0A6J1H9V3 Selenoprotein O1.6e-4171.22Show/hide
Query:  MSLRSHFFPKLSLLPHISLLCHG--HRLGLVRRPSSLLI-RTSSSSLVSPPPPLAGHFGHRRRRVSMDSTSPEVSVSVSVDSVAQDLKNQSLNSDDHEHE
        MSL SH FPKLSLLPHISLLCHG  HRLGLVRR S+ LI R   +S+ S P PL GH  H RRRVSMDS SPE  VS SVDSVA  LKNQSLNSDD    
Subjt:  MSLRSHFFPKLSLLPHISLLCHG--HRLGLVRRPSSLLI-RTSSSSLVSPPPPLAGHFGHRRRRVSMDSTSPEVSVSVSVDSVAQDLKNQSLNSDDHEHE

Query:  GSSLKNKVKKKLEDLNWDNSFVRELPGDPRTDIIPREVL
        GS +++  KKKLE+LNWDNSFVRELPGDPRTD++PR+VL
Subjt:  GSSLKNKVKKKLEDLNWDNSFVRELPGDPRTDIIPREVL

A0A6J1JKI6 Selenoprotein O4.8e-4169.78Show/hide
Query:  MSLRSHFFPKLSLLPHISLLCHG--HRLGLVRRPSSLLI-RTSSSSLVSPPPPLAGHFGHRRRRVSMDSTSPEVSVSVSVDSVAQDLKNQSLNSDDHEHE
        MSL SH FPKLSLLPHISLLC+G  HRLGLVRR S+ LI R   +++ SPP PL GH  H RRRVSMDS SPE  VS SVDSVA+ LKNQ+LNSDD    
Subjt:  MSLRSHFFPKLSLLPHISLLCHG--HRLGLVRRPSSLLI-RTSSSSLVSPPPPLAGHFGHRRRRVSMDSTSPEVSVSVSVDSVAQDLKNQSLNSDDHEHE

Query:  GSSLKNKVKKKLEDLNWDNSFVRELPGDPRTDIIPREVL
        GS +++  +KKLE+LNWDNSFVRELPGDPRTD+IPR+VL
Subjt:  GSSLKNKVKKKLEDLNWDNSFVRELPGDPRTDIIPREVL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G13030.1 unknown protein9.9e-1560.56Show/hide
Query:  STSPEVSVSVSVDSVAQDLKNQSLNSDDHEHEGSSLKNKVKKKLEDLNWDNSFVRELPGDPRTDIIPREVL
        S+SP      S DS+A+DL+NQSL + D   EG     K+KKKLED NWD+SFV+ELPGDPRTD+I REVL
Subjt:  STSPEVSVSVSVDSVAQDLKNQSLNSDDHEHEGSSLKNKVKKKLEDLNWDNSFVRELPGDPRTDIIPREVL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCTTGCGTTCACATTTCTTCCCAAAGCTCTCGCTGCTTCCCCACATCTCTCTCCTCTGCCATGGCCACCGCCTCGGCTTAGTTCGCCGCCCTTCCAGTCTCCTCAT
TCGCACCTCCTCCTCCTCTCTCGTCTCTCCGCCTCCCCCACTCGCCGGCCACTTTGGCCACCGTCGCCGGAGAGTTTCTATGGACTCTACTTCACCGGAGGTTTCAGTTT
CGGTGTCGGTCGACTCCGTGGCGCAGGATTTGAAGAATCAGAGCTTGAACAGCGATGATCATGAACACGAAGGAAGTAGCCTCAAGAACAAGGTGAAAAAGAAGCTCGAA
GATCTGAACTGGGATAATTCCTTCGTTAGAGAGCTCCCCGGCGATCCCCGCACGGATATCATTCCACGAGAGGTTCTATTT
mRNA sequenceShow/hide mRNA sequence
ATGTCCTTGCGTTCACATTTCTTCCCAAAGCTCTCGCTGCTTCCCCACATCTCTCTCCTCTGCCATGGCCACCGCCTCGGCTTAGTTCGCCGCCCTTCCAGTCTCCTCAT
TCGCACCTCCTCCTCCTCTCTCGTCTCTCCGCCTCCCCCACTCGCCGGCCACTTTGGCCACCGTCGCCGGAGAGTTTCTATGGACTCTACTTCACCGGAGGTTTCAGTTT
CGGTGTCGGTCGACTCCGTGGCGCAGGATTTGAAGAATCAGAGCTTGAACAGCGATGATCATGAACACGAAGGAAGTAGCCTCAAGAACAAGGTGAAAAAGAAGCTCGAA
GATCTGAACTGGGATAATTCCTTCGTTAGAGAGCTCCCCGGCGATCCCCGCACGGATATCATTCCACGAGAGGTTCTATTT
Protein sequenceShow/hide protein sequence
MSLRSHFFPKLSLLPHISLLCHGHRLGLVRRPSSLLIRTSSSSLVSPPPPLAGHFGHRRRRVSMDSTSPEVSVSVSVDSVAQDLKNQSLNSDDHEHEGSSLKNKVKKKLE
DLNWDNSFVRELPGDPRTDIIPREVLF