; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS023270 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS023270
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionSelenoprotein O
Genome locationscaffold78:1595914..1596797
RNA-Seq ExpressionMS023270
SyntenyMS023270
Gene Ontology termsGO:0009249 - protein lipoylation (biological process)
GO:0005524 - ATP binding (molecular function)
GO:0016779 - nucleotidyltransferase activity (molecular function)
GO:0033819 - lipoyl(octanoyl) transferase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0102555 - octanoyl transferase activity (acting on glycine-cleavage complex H protein) (molecular function)
InterPro domainsIPR003846 - Protein adenylyltransferase SelO


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042281.1 UPF0061 protein [Cucumis melo var. makuwa]3.0e-8794.67Show/hide
Query:  MWAGQLGDGRAITLGEILNSQSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSESMHSLGIPTTRALCVVTTGTLVTRDMFYDGNPKEEPGAIVCR
        MWAGQLGDGRAITLGEILNS+SERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSE+MHSLGIPTTRALC++TTGT VTRDMFYDGNPKEEPGAIVCR
Subjt:  MWAGQLGDGRAITLGEILNSQSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSESMHSLGIPTTRALCVVTTGTLVTRDMFYDGNPKEEPGAIVCR

Query:  VAQSFLRFGSYQIHASRGKDDYKIVRALADYAIHHHFPHLENMSSSQSLSFSTGNEDDSVVDLTSNKYA
        VAQSFLRFGSYQIHASRGKDDYKIVRALADY IHHHFPHLENMSSSQS+SFSTGN D SVVDLTSNKYA
Subjt:  VAQSFLRFGSYQIHASRGKDDYKIVRALADYAIHHHFPHLENMSSSQSLSFSTGNEDDSVVDLTSNKYA

TYK26910.1 UPF0061 protein [Cucumis melo var. makuwa]3.0e-8794.67Show/hide
Query:  MWAGQLGDGRAITLGEILNSQSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSESMHSLGIPTTRALCVVTTGTLVTRDMFYDGNPKEEPGAIVCR
        MWAGQLGDGRAITLGEILNS+SERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSE+MHSLGIPTTRALC++TTGT VTRDMFYDGNPKEEPGAIVCR
Subjt:  MWAGQLGDGRAITLGEILNSQSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSESMHSLGIPTTRALCVVTTGTLVTRDMFYDGNPKEEPGAIVCR

Query:  VAQSFLRFGSYQIHASRGKDDYKIVRALADYAIHHHFPHLENMSSSQSLSFSTGNEDDSVVDLTSNKYA
        VAQSFLRFGSYQIHASRGKDDYKIVRALADY IHHHFPHLENMSSSQS+SFSTGN D SVVDLTSNKYA
Subjt:  VAQSFLRFGSYQIHASRGKDDYKIVRALADYAIHHHFPHLENMSSSQSLSFSTGNEDDSVVDLTSNKYA

XP_004149028.1 uncharacterized protein LOC101218327 [Cucumis sativus]7.5e-8693.49Show/hide
Query:  MWAGQLGDGRAITLGEILNSQSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSESMHSLGIPTTRALCVVTTGTLVTRDMFYDGNPKEEPGAIVCR
        MWAGQLGDGRAITLGEILNS+SERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSE+MHSLGIPTTRALC++TTGT VTRDMFYDGNPKEEPGAIVCR
Subjt:  MWAGQLGDGRAITLGEILNSQSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSESMHSLGIPTTRALCVVTTGTLVTRDMFYDGNPKEEPGAIVCR

Query:  VAQSFLRFGSYQIHASRGKDDYKIVRALADYAIHHHFPHLENMSSSQSLSFSTGNEDDSVVDLTSNKYA
        VAQSFLRFGSYQIHASRGKDD+KIVRALADY I HHFPHLENMSSSQS+SFSTGN D SVVDLTSNKYA
Subjt:  VAQSFLRFGSYQIHASRGKDDYKIVRALADYAIHHHFPHLENMSSSQSLSFSTGNEDDSVVDLTSNKYA

XP_008451128.1 PREDICTED: UPF0061 protein azo1574 [Cucumis melo]3.0e-8794.67Show/hide
Query:  MWAGQLGDGRAITLGEILNSQSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSESMHSLGIPTTRALCVVTTGTLVTRDMFYDGNPKEEPGAIVCR
        MWAGQLGDGRAITLGEILNS+SERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSE+MHSLGIPTTRALC++TTGT VTRDMFYDGNPKEEPGAIVCR
Subjt:  MWAGQLGDGRAITLGEILNSQSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSESMHSLGIPTTRALCVVTTGTLVTRDMFYDGNPKEEPGAIVCR

Query:  VAQSFLRFGSYQIHASRGKDDYKIVRALADYAIHHHFPHLENMSSSQSLSFSTGNEDDSVVDLTSNKYA
        VAQSFLRFGSYQIHASRGKDDYKIVRALADY IHHHFPHLENMSSSQS+SFSTGN D SVVDLTSNKYA
Subjt:  VAQSFLRFGSYQIHASRGKDDYKIVRALADYAIHHHFPHLENMSSSQSLSFSTGNEDDSVVDLTSNKYA

XP_022154095.1 uncharacterized protein LOC111021431 [Momordica charantia]5.9e-9199.41Show/hide
Query:  MWAGQLGDGRAITLGEILNSQSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSESMHSLGIPTTRALCVVTTGTLVTRDMFYDGNPKEEPGAIVCR
        MWAGQLGDGRAITLGEILNSQSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSESMH LGIPTTRALCVVTTGTLVTRDMFYDGNPKEEPGAIVCR
Subjt:  MWAGQLGDGRAITLGEILNSQSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSESMHSLGIPTTRALCVVTTGTLVTRDMFYDGNPKEEPGAIVCR

Query:  VAQSFLRFGSYQIHASRGKDDYKIVRALADYAIHHHFPHLENMSSSQSLSFSTGNEDDSVVDLTSNKYA
        VAQSFLRFGSYQIHASRGKDDYKIVRALADYAIHHHFPHLENMSSSQSLSFSTGNEDDSVVDLTSNKYA
Subjt:  VAQSFLRFGSYQIHASRGKDDYKIVRALADYAIHHHFPHLENMSSSQSLSFSTGNEDDSVVDLTSNKYA

TrEMBL top hitse value%identityAlignment
A0A0A0LXE5 Selenoprotein O3.6e-8693.49Show/hide
Query:  MWAGQLGDGRAITLGEILNSQSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSESMHSLGIPTTRALCVVTTGTLVTRDMFYDGNPKEEPGAIVCR
        MWAGQLGDGRAITLGEILNS+SERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSE+MHSLGIPTTRALC++TTGT VTRDMFYDGNPKEEPGAIVCR
Subjt:  MWAGQLGDGRAITLGEILNSQSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSESMHSLGIPTTRALCVVTTGTLVTRDMFYDGNPKEEPGAIVCR

Query:  VAQSFLRFGSYQIHASRGKDDYKIVRALADYAIHHHFPHLENMSSSQSLSFSTGNEDDSVVDLTSNKYA
        VAQSFLRFGSYQIHASRGKDD+KIVRALADY I HHFPHLENMSSSQS+SFSTGN D SVVDLTSNKYA
Subjt:  VAQSFLRFGSYQIHASRGKDDYKIVRALADYAIHHHFPHLENMSSSQSLSFSTGNEDDSVVDLTSNKYA

A0A1S3BRJ3 Selenoprotein O1.5e-8794.67Show/hide
Query:  MWAGQLGDGRAITLGEILNSQSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSESMHSLGIPTTRALCVVTTGTLVTRDMFYDGNPKEEPGAIVCR
        MWAGQLGDGRAITLGEILNS+SERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSE+MHSLGIPTTRALC++TTGT VTRDMFYDGNPKEEPGAIVCR
Subjt:  MWAGQLGDGRAITLGEILNSQSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSESMHSLGIPTTRALCVVTTGTLVTRDMFYDGNPKEEPGAIVCR

Query:  VAQSFLRFGSYQIHASRGKDDYKIVRALADYAIHHHFPHLENMSSSQSLSFSTGNEDDSVVDLTSNKYA
        VAQSFLRFGSYQIHASRGKDDYKIVRALADY IHHHFPHLENMSSSQS+SFSTGN D SVVDLTSNKYA
Subjt:  VAQSFLRFGSYQIHASRGKDDYKIVRALADYAIHHHFPHLENMSSSQSLSFSTGNEDDSVVDLTSNKYA

A0A5A7TL19 Selenoprotein O1.5e-8794.67Show/hide
Query:  MWAGQLGDGRAITLGEILNSQSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSESMHSLGIPTTRALCVVTTGTLVTRDMFYDGNPKEEPGAIVCR
        MWAGQLGDGRAITLGEILNS+SERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSE+MHSLGIPTTRALC++TTGT VTRDMFYDGNPKEEPGAIVCR
Subjt:  MWAGQLGDGRAITLGEILNSQSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSESMHSLGIPTTRALCVVTTGTLVTRDMFYDGNPKEEPGAIVCR

Query:  VAQSFLRFGSYQIHASRGKDDYKIVRALADYAIHHHFPHLENMSSSQSLSFSTGNEDDSVVDLTSNKYA
        VAQSFLRFGSYQIHASRGKDDYKIVRALADY IHHHFPHLENMSSSQS+SFSTGN D SVVDLTSNKYA
Subjt:  VAQSFLRFGSYQIHASRGKDDYKIVRALADYAIHHHFPHLENMSSSQSLSFSTGNEDDSVVDLTSNKYA

A0A5D3DUC9 Selenoprotein O1.5e-8794.67Show/hide
Query:  MWAGQLGDGRAITLGEILNSQSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSESMHSLGIPTTRALCVVTTGTLVTRDMFYDGNPKEEPGAIVCR
        MWAGQLGDGRAITLGEILNS+SERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSE+MHSLGIPTTRALC++TTGT VTRDMFYDGNPKEEPGAIVCR
Subjt:  MWAGQLGDGRAITLGEILNSQSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSESMHSLGIPTTRALCVVTTGTLVTRDMFYDGNPKEEPGAIVCR

Query:  VAQSFLRFGSYQIHASRGKDDYKIVRALADYAIHHHFPHLENMSSSQSLSFSTGNEDDSVVDLTSNKYA
        VAQSFLRFGSYQIHASRGKDDYKIVRALADY IHHHFPHLENMSSSQS+SFSTGN D SVVDLTSNKYA
Subjt:  VAQSFLRFGSYQIHASRGKDDYKIVRALADYAIHHHFPHLENMSSSQSLSFSTGNEDDSVVDLTSNKYA

A0A6J1DIN2 Selenoprotein O2.9e-9199.41Show/hide
Query:  MWAGQLGDGRAITLGEILNSQSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSESMHSLGIPTTRALCVVTTGTLVTRDMFYDGNPKEEPGAIVCR
        MWAGQLGDGRAITLGEILNSQSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSESMH LGIPTTRALCVVTTGTLVTRDMFYDGNPKEEPGAIVCR
Subjt:  MWAGQLGDGRAITLGEILNSQSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSESMHSLGIPTTRALCVVTTGTLVTRDMFYDGNPKEEPGAIVCR

Query:  VAQSFLRFGSYQIHASRGKDDYKIVRALADYAIHHHFPHLENMSSSQSLSFSTGNEDDSVVDLTSNKYA
        VAQSFLRFGSYQIHASRGKDDYKIVRALADYAIHHHFPHLENMSSSQSLSFSTGNEDDSVVDLTSNKYA
Subjt:  VAQSFLRFGSYQIHASRGKDDYKIVRALADYAIHHHFPHLENMSSSQSLSFSTGNEDDSVVDLTSNKYA

SwissProt top hitse value%identityAlignment
A1K5T6 Protein adenylyltransferase SelO2.1e-5170Show/hide
Query:  WAGQLGDGRAITLGEILNSQSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSESMHSLGIPTTRALCVVTTGTLVTRDMFYDGNPKEEPGAIVCRV
        WAGQLGDGRAITLGE+LN Q  RWELQLKGAG TPYSR ADG AVLRSSIREFLCSE+MH LG+PTTRAL +V TG  V RDMFYDGNP+ EPGAIVCRV
Subjt:  WAGQLGDGRAITLGEILNSQSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSESMHSLGIPTTRALCVVTTGTLVTRDMFYDGNPKEEPGAIVCRV

Query:  AQSFLRFGSYQIHASRGKDDYKIVRALADYAIHHHFPHLE
        A SF+RFG++++ A+RG  D  ++  L D+ I   FP +E
Subjt:  AQSFLRFGSYQIHASRGKDDYKIVRALADYAIHHHFPHLE

C4LAV8 Protein adenylyltransferase SelO4.9e-4866.91Show/hide
Query:  WAGQLGDGRAITLGEILNSQSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSESMHSLGIPTTRALCVVTTGTLVTRDMFYDGNPKEEPGAIVCRV
        WAGQLGDGRAI+LGE++++   RWELQLKGAG TPYSR  DG AVLRSSIREFLCSE+M  LG+PTTRAL +V TG  + RDMFYDGNP++EPGAIVCRV
Subjt:  WAGQLGDGRAITLGEILNSQSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSESMHSLGIPTTRALCVVTTGTLVTRDMFYDGNPKEEPGAIVCRV

Query:  AQSFLRFGSYQIHASRGKDDYKIVRALADYAIHHHFPHL
        A SF+RFG +Q+ A RG+ D  ++  L D+ I   FPHL
Subjt:  AQSFLRFGSYQIHASRGKDDYKIVRALADYAIHHHFPHL

Q1H0D2 Protein adenylyltransferase SelO8.1e-5164.43Show/hide
Query:  WAGQLGDGRAITLGEILNSQSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSESMHSLGIPTTRALCVVTTGTLVTRDMFYDGNPKEEPGAIVCRV
        WAGQLGDGRAI+LGE++N Q +RWELQLKGAG TPYSR ADG AVLRSS+REFLCSE+MH LGIPTTRAL +V TG +V RDMFYDG+P+ E GAIVCRV
Subjt:  WAGQLGDGRAITLGEILNSQSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSESMHSLGIPTTRALCVVTTGTLVTRDMFYDGNPKEEPGAIVCRV

Query:  AQSFLRFGSYQIHASRGKDDYKIVRALADYAIHHHFPHLENMSSSQSLS
        + SF+RFG+++I A R  DD + ++ L D+ I   FP L N    + L+
Subjt:  AQSFLRFGSYQIHASRGKDDYKIVRALADYAIHHHFPHLENMSSSQSLS

Q2Y8V8 Protein adenylyltransferase SelO2.4e-5068.35Show/hide
Query:  WAGQLGDGRAITLGEILNSQSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSESMHSLGIPTTRALCVVTTGTLVTRDMFYDGNPKEEPGAIVCRV
        WAGQLGDGRAITLGE+++   +R+ELQLKGAGKTPYSR ADG AVLRSS+REFLCSE+MHSLG+PTTRAL +V TG  V RDMFYDG+P  EPGAIVCRV
Subjt:  WAGQLGDGRAITLGEILNSQSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSESMHSLGIPTTRALCVVTTGTLVTRDMFYDGNPKEEPGAIVCRV

Query:  AQSFLRFGSYQIHASRGKDDYKIVRALADYAIHHHFPHL
        + SFLRFG+++I A++ + +  ++R LAD+ I  HFP L
Subjt:  AQSFLRFGSYQIHASRGKDDYKIVRALADYAIHHHFPHL

Q5NYD9 Protein adenylyltransferase SelO2.0e-4967.13Show/hide
Query:  WAGQLGDGRAITLGEILNSQSE----RWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSESMHSLGIPTTRALCVVTTGTLVTRDMFYDGNPKEEPGAI
        WAGQLGDGRAITLGE + ++ +    RWELQLKGAG TPYSR ADG AVLRSSIREFLCSE+MH LG+PTTRALC+V TG  V RDMFYDG PK EPGA+
Subjt:  WAGQLGDGRAITLGEILNSQSE----RWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSESMHSLGIPTTRALCVVTTGTLVTRDMFYDGNPKEEPGAI

Query:  VCRVAQSFLRFGSYQIHASRGKDDYKIVRALADYAIHHHFPHL
        VCRVA SF+RFG+++I  SRG  D  ++  L D+ I   FP L
Subjt:  VCRVAQSFLRFGSYQIHASRGKDDYKIVRALADYAIHHHFPHL

Arabidopsis top hitse value%identityAlignment
AT5G13030.1 unknown protein2.2e-8386.39Show/hide
Query:  MWAGQLGDGRAITLGEILNSQSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSESMHSLGIPTTRALCVVTTGTLVTRDMFYDGNPKEEPGAIVCR
        MWAGQLGDGRAITLGE+LNS+ ERWELQLKGAG+TPYSRFADGLAVLRSSIREFLCSE+MH LGIPTTRALC++TTG  VTRDMFYDGNPKEEPGAIVCR
Subjt:  MWAGQLGDGRAITLGEILNSQSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSESMHSLGIPTTRALCVVTTGTLVTRDMFYDGNPKEEPGAIVCR

Query:  VAQSFLRFGSYQIHASRGKDDYKIVRALADYAIHHHFPHLENMSSSQSLSFSTGNEDDSVVDLTSNKYA
        V+QSFLRFGSYQIHASRGK+D  IVR LADYAI HHFPH+E+M  S SLSF TG+EDDSVVDLTSNKYA
Subjt:  VAQSFLRFGSYQIHASRGKDDYKIVRALADYAIHHHFPHLENMSSSQSLSFSTGNEDDSVVDLTSNKYA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGGCTGGACAGTTGGGTGATGGTCGAGCAATAACCCTTGGAGAGATACTTAATTCCCAATCTGAAAGGTGGGAGTTGCAGCTAAAAGGTGCTGGGAAGACTCCATA
CAGTCGGTTTGCAGATGGCTTGGCTGTGTTACGAAGTAGCATCCGGGAGTTCCTTTGTAGTGAATCAATGCACAGTCTTGGAATACCAACAACTCGTGCACTTTGTGTTG
TGACCACAGGAACATTAGTTACTCGAGATATGTTTTATGATGGGAATCCAAAAGAGGAGCCTGGTGCAATTGTATGCAGAGTGGCTCAGTCCTTTTTGCGTTTTGGATCA
TACCAAATTCATGCCTCTAGAGGAAAAGATGATTACAAAATTGTTCGGGCTTTAGCAGACTACGCGATCCACCACCATTTTCCTCACCTAGAGAATATGAGCAGCAGTCA
GAGTTTATCTTTCAGCACAGGCAATGAAGATGATTCAGTTGTTGATCTCACTTCAAACAAGTATGCAGGTAATTGTATCTGT
mRNA sequenceShow/hide mRNA sequence
ATGTGGGCTGGACAGTTGGGTGATGGTCGAGCAATAACCCTTGGAGAGATACTTAATTCCCAATCTGAAAGGTGGGAGTTGCAGCTAAAAGGTGCTGGGAAGACTCCATA
CAGTCGGTTTGCAGATGGCTTGGCTGTGTTACGAAGTAGCATCCGGGAGTTCCTTTGTAGTGAATCAATGCACAGTCTTGGAATACCAACAACTCGTGCACTTTGTGTTG
TGACCACAGGAACATTAGTTACTCGAGATATGTTTTATGATGGGAATCCAAAAGAGGAGCCTGGTGCAATTGTATGCAGAGTGGCTCAGTCCTTTTTGCGTTTTGGATCA
TACCAAATTCATGCCTCTAGAGGAAAAGATGATTACAAAATTGTTCGGGCTTTAGCAGACTACGCGATCCACCACCATTTTCCTCACCTAGAGAATATGAGCAGCAGTCA
GAGTTTATCTTTCAGCACAGGCAATGAAGATGATTCAGTTGTTGATCTCACTTCAAACAAGTATGCAGGTAATTGTATCTGT
Protein sequenceShow/hide protein sequence
MWAGQLGDGRAITLGEILNSQSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSESMHSLGIPTTRALCVVTTGTLVTRDMFYDGNPKEEPGAIVCRVAQSFLRFGS
YQIHASRGKDDYKIVRALADYAIHHHFPHLENMSSSQSLSFSTGNEDDSVVDLTSNKYAGNCIC