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MS023275 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS023275
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRho GTPase-activating gacO-like protein
Genome locationscaffold78:1655012..1655431
RNA-Seq ExpressionMS023275
SyntenyMS023275
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6590227.1 hypothetical protein SDJN03_15650, partial [Cucurbita argyrosperma subsp. sororia]3.6e-5489.29Show/hide
Query:  MGRGRGKGRKLSVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEGENKIEDDDGENLKGGDIISNKEMKSPAAAENGKRRRRNSQAKEKLDSVKEE
        MGRGRGKGRKL+VTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEE E KIEDDD EN+KG DI+S KEMKSP AAENGKRRRR+SQ KEKLD VK+E
Subjt:  MGRGRGKGRKLSVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEGENKIEDDDGENLKGGDIISNKEMKSPAAAENGKRRRRNSQAKEKLDSVKEE

Query:  NGDGTRSSTDESTRSNGFRHNGSRRKSKPRRAAEAGVNCK
        NGDGTRSSTDESTRSNGFRHNGSRRKSKP RAAEAGVNC+
Subjt:  NGDGTRSSTDESTRSNGFRHNGSRRKSKPRRAAEAGVNCK

XP_004149029.1 uncharacterized protein LOC101218566 [Cucumis sativus]3.2e-5590Show/hide
Query:  MGRGRGKGRKLSVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEGENKIEDDDGENLKGGDIISNKEMKSPAAAENGKRRRRNSQAKEKLDSVKEE
        MGRGRGKGRKL+VTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEE E KIED+D ENLKG DI+S KEMK+P AAENGKRRRRNSQ KEKLD VK+E
Subjt:  MGRGRGKGRKLSVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEGENKIEDDDGENLKGGDIISNKEMKSPAAAENGKRRRRNSQAKEKLDSVKEE

Query:  NGDGTRSSTDESTRSNGFRHNGSRRKSKPRRAAEAGVNCK
        NGDGTRSSTDESTRSNGFRHNGSRRKSKPRRAAEAGV+CK
Subjt:  NGDGTRSSTDESTRSNGFRHNGSRRKSKPRRAAEAGVNCK

XP_022154112.1 uncharacterized protein LOC111021447 [Momordica charantia]4.5e-65100Show/hide
Query:  MGRGRGKGRKLSVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEGENKIEDDDGENLKGGDIISNKEMKSPAAAENGKRRRRNSQAKEKLDSVKEE
        MGRGRGKGRKLSVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEGENKIEDDDGENLKGGDIISNKEMKSPAAAENGKRRRRNSQAKEKLDSVKEE
Subjt:  MGRGRGKGRKLSVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEGENKIEDDDGENLKGGDIISNKEMKSPAAAENGKRRRRNSQAKEKLDSVKEE

Query:  NGDGTRSSTDESTRSNGFRHNGSRRKSKPRRAAEAGVNCK
        NGDGTRSSTDESTRSNGFRHNGSRRKSKPRRAAEAGVNCK
Subjt:  NGDGTRSSTDESTRSNGFRHNGSRRKSKPRRAAEAGVNCK

XP_023516906.1 uncharacterized protein LOC111780671 [Cucurbita pepo subsp. pepo]2.1e-5489.29Show/hide
Query:  MGRGRGKGRKLSVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEGENKIEDDDGENLKGGDIISNKEMKSPAAAENGKRRRRNSQAKEKLDSVKEE
        MGRGRGKGRKL+VTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEE E KIEDDD EN+KG DI+S KEMKSP AAENGKRRRR+SQ KEKLD VK+E
Subjt:  MGRGRGKGRKLSVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEGENKIEDDDGENLKGGDIISNKEMKSPAAAENGKRRRRNSQAKEKLDSVKEE

Query:  NGDGTRSSTDESTRSNGFRHNGSRRKSKPRRAAEAGVNCK
        NGDGTRSSTDESTRSNGFRHNGSRRKSKP RAAEAGVNC+
Subjt:  NGDGTRSSTDESTRSNGFRHNGSRRKSKPRRAAEAGVNCK

XP_038879962.1 uncharacterized protein LOC120071662 [Benincasa hispida]1.1e-5590.71Show/hide
Query:  MGRGRGKGRKLSVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEGENKIEDDDGENLKGGDIISNKEMKSPAAAENGKRRRRNSQAKEKLDSVKEE
        MGRGRGKGRKL+VTNHDDAGSGEEEKIP QKRRGRPQKPLKDEIDEEE E KIED+D ENLKG DI+S KEMKSP AAENGKRRRRNSQ KEKLD VK+E
Subjt:  MGRGRGKGRKLSVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEGENKIEDDDGENLKGGDIISNKEMKSPAAAENGKRRRRNSQAKEKLDSVKEE

Query:  NGDGTRSSTDESTRSNGFRHNGSRRKSKPRRAAEAGVNCK
        NGDGTRSSTDESTRSNGFRHNGSRRKSKPRRAAEAGVNCK
Subjt:  NGDGTRSSTDESTRSNGFRHNGSRRKSKPRRAAEAGVNCK

TrEMBL top hitse value%identityAlignment
A0A0A0LXE8 Uncharacterized protein1.6e-5590Show/hide
Query:  MGRGRGKGRKLSVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEGENKIEDDDGENLKGGDIISNKEMKSPAAAENGKRRRRNSQAKEKLDSVKEE
        MGRGRGKGRKL+VTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEE E KIED+D ENLKG DI+S KEMK+P AAENGKRRRRNSQ KEKLD VK+E
Subjt:  MGRGRGKGRKLSVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEGENKIEDDDGENLKGGDIISNKEMKSPAAAENGKRRRRNSQAKEKLDSVKEE

Query:  NGDGTRSSTDESTRSNGFRHNGSRRKSKPRRAAEAGVNCK
        NGDGTRSSTDESTRSNGFRHNGSRRKSKPRRAAEAGV+CK
Subjt:  NGDGTRSSTDESTRSNGFRHNGSRRKSKPRRAAEAGVNCK

A0A1S3BRW6 uncharacterized protein LOC1034925111.6e-5590Show/hide
Query:  MGRGRGKGRKLSVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEGENKIEDDDGENLKGGDIISNKEMKSPAAAENGKRRRRNSQAKEKLDSVKEE
        MGRGRGKGRKL+VTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEE E KIED+D ENLKG DI+S KEMK+P AAENGKRRRRNSQ KEKLD VK+E
Subjt:  MGRGRGKGRKLSVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEGENKIEDDDGENLKGGDIISNKEMKSPAAAENGKRRRRNSQAKEKLDSVKEE

Query:  NGDGTRSSTDESTRSNGFRHNGSRRKSKPRRAAEAGVNCK
        NGDGTRSSTDESTRSNGFRHNGSRRKSKPRRAAEAGV+CK
Subjt:  NGDGTRSSTDESTRSNGFRHNGSRRKSKPRRAAEAGVNCK

A0A5A7TJZ9 Uncharacterized protein1.6e-5590Show/hide
Query:  MGRGRGKGRKLSVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEGENKIEDDDGENLKGGDIISNKEMKSPAAAENGKRRRRNSQAKEKLDSVKEE
        MGRGRGKGRKL+VTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEE E KIED+D ENLKG DI+S KEMK+P AAENGKRRRRNSQ KEKLD VK+E
Subjt:  MGRGRGKGRKLSVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEGENKIEDDDGENLKGGDIISNKEMKSPAAAENGKRRRRNSQAKEKLDSVKEE

Query:  NGDGTRSSTDESTRSNGFRHNGSRRKSKPRRAAEAGVNCK
        NGDGTRSSTDESTRSNGFRHNGSRRKSKPRRAAEAGV+CK
Subjt:  NGDGTRSSTDESTRSNGFRHNGSRRKSKPRRAAEAGVNCK

A0A6J1DKT0 uncharacterized protein LOC1110214472.2e-65100Show/hide
Query:  MGRGRGKGRKLSVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEGENKIEDDDGENLKGGDIISNKEMKSPAAAENGKRRRRNSQAKEKLDSVKEE
        MGRGRGKGRKLSVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEGENKIEDDDGENLKGGDIISNKEMKSPAAAENGKRRRRNSQAKEKLDSVKEE
Subjt:  MGRGRGKGRKLSVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEGENKIEDDDGENLKGGDIISNKEMKSPAAAENGKRRRRNSQAKEKLDSVKEE

Query:  NGDGTRSSTDESTRSNGFRHNGSRRKSKPRRAAEAGVNCK
        NGDGTRSSTDESTRSNGFRHNGSRRKSKPRRAAEAGVNCK
Subjt:  NGDGTRSSTDESTRSNGFRHNGSRRKSKPRRAAEAGVNCK

A0A6J1H9S1 uncharacterized protein LOC1114614265.0e-5488.57Show/hide
Query:  MGRGRGKGRKLSVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEGENKIEDDDGENLKGGDIISNKEMKSPAAAENGKRRRRNSQAKEKLDSVKEE
        MGRGRGKGRK +VTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEE E KIEDDD EN+KG DI+S KEMKSP AAENGKRRRR+SQ KEKLD VK+E
Subjt:  MGRGRGKGRKLSVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEGENKIEDDDGENLKGGDIISNKEMKSPAAAENGKRRRRNSQAKEKLDSVKEE

Query:  NGDGTRSSTDESTRSNGFRHNGSRRKSKPRRAAEAGVNCK
        NGDGTRSSTDESTRSNGFRHNGSRRKSKP RAAEAGVNC+
Subjt:  NGDGTRSSTDESTRSNGFRHNGSRRKSKPRRAAEAGVNCK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G42190.1 unknown protein3.5e-2348.65Show/hide
Query:  MGRGRGKGRKLSVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEGENKIE-------DDDGENLKGGDIISNKEMKSPAAAENGKRRRRNSQAKEK
        M RGRGKG+K + +  +D GSG+EEKIPA +RRGRPQKP+KD+ +EEE E+  E       +D+ E +  G + S          ++ K R+R       
Subjt:  MGRGRGKGRKLSVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEGENKIE-------DDDGENLKGGDIISNKEMKSPAAAENGKRRRRNSQAKEK

Query:  LDSVKEENGDGTRSSTDESTRSN--GFRHNGSRRKSKPRRAAEAGVNC
         D  +EENG G++ +TD+STRS   GFR NGSRRKSKPRRAAEA V C
Subjt:  LDSVKEENGDGTRSSTDESTRSN--GFRHNGSRRKSKPRRAAEAGVNC

AT3G57930.1 unknown protein3.5e-2349.31Show/hide
Query:  MGRGRGKGRKLSVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEG--ENKIEDDDGENLKGGDIISNKEMKSPAAAENGKRRRRNSQAKEKLDSVK
        M RGRGKG++ + T  +D GSGEEEKIPA ++RGRPQKP+KDE +EEE   +   E++D ++   G + S + +      ENG++R++  ++KE  +  +
Subjt:  MGRGRGKGRKLSVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEG--ENKIEDDDGENLKGGDIISNKEMKSPAAAENGKRRRRNSQAKEKLDSVK

Query:  EENGDGTRSSTDESTRSN---GFRHNGSRRKSKPRRAAEAGVNC
        EENG G++SST++S +S+   GFR NGSRRK+KPRRAAEA V C
Subjt:  EENGDGTRSSTDESTRSN---GFRHNGSRRKSKPRRAAEAGVNC

AT3G57930.2 unknown protein3.5e-2349.31Show/hide
Query:  MGRGRGKGRKLSVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEG--ENKIEDDDGENLKGGDIISNKEMKSPAAAENGKRRRRNSQAKEKLDSVK
        M RGRGKG++ + T  +D GSGEEEKIPA ++RGRPQKP+KDE +EEE   +   E++D ++   G + S + +      ENG++R++  ++KE  +  +
Subjt:  MGRGRGKGRKLSVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEG--ENKIEDDDGENLKGGDIISNKEMKSPAAAENGKRRRRNSQAKEKLDSVK

Query:  EENGDGTRSSTDESTRSN---GFRHNGSRRKSKPRRAAEAGVNC
        EENG G++SST++S +S+   GFR NGSRRK+KPRRAAEA V C
Subjt:  EENGDGTRSSTDESTRSN---GFRHNGSRRKSKPRRAAEAGVNC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTAGAGGGCGAGGAAAGGGGAGGAAGTTGAGCGTCACGAATCATGATGATGCTGGGAGTGGTGAGGAGGAGAAGATTCCCGCGCAAAAGCGGAGGGGAAGGCCACA
GAAGCCATTGAAGGATGAGATTGACGAGGAAGAAGGTGAGAATAAGATAGAAGACGACGACGGAGAGAACCTGAAAGGCGGGGACATCATCAGCAATAAGGAGATGAAAA
GCCCTGCTGCAGCAGAGAATGGGAAAAGGAGGAGGAGAAACTCACAGGCGAAAGAAAAGCTCGACTCGGTCAAAGAGGAAAACGGGGATGGAACGCGATCAAGCACCGAT
GAATCAACCAGATCAAATGGATTCCGCCACAATGGAAGCAGGCGAAAAAGCAAGCCCCGTCGAGCTGCAGAAGCGGGCGTCAACTGCAAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTAGAGGGCGAGGAAAGGGGAGGAAGTTGAGCGTCACGAATCATGATGATGCTGGGAGTGGTGAGGAGGAGAAGATTCCCGCGCAAAAGCGGAGGGGAAGGCCACA
GAAGCCATTGAAGGATGAGATTGACGAGGAAGAAGGTGAGAATAAGATAGAAGACGACGACGGAGAGAACCTGAAAGGCGGGGACATCATCAGCAATAAGGAGATGAAAA
GCCCTGCTGCAGCAGAGAATGGGAAAAGGAGGAGGAGAAACTCACAGGCGAAAGAAAAGCTCGACTCGGTCAAAGAGGAAAACGGGGATGGAACGCGATCAAGCACCGAT
GAATCAACCAGATCAAATGGATTCCGCCACAATGGAAGCAGGCGAAAAAGCAAGCCCCGTCGAGCTGCAGAAGCGGGCGTCAACTGCAAG
Protein sequenceShow/hide protein sequence
MGRGRGKGRKLSVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEGENKIEDDDGENLKGGDIISNKEMKSPAAAENGKRRRRNSQAKEKLDSVKEENGDGTRSSTD
ESTRSNGFRHNGSRRKSKPRRAAEAGVNCK