; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS023295 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS023295
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionzinc finger protein ZAT3-like
Genome locationscaffold101:408157..408582
RNA-Seq ExpressionMS023295
SyntenyMS023295
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR013087 - Zinc finger C2H2-type
IPR036236 - Zinc finger C2H2 superfamily
IPR044653 - C2H2-type zinc-finger protein AZF1/2/3-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596792.1 Zinc finger protein ZAT3, partial [Cucurbita argyrosperma subsp. sororia]1.8e-2142.86Show/hide
Query:  KCGLCGKLFRTMKALYGHMRSHPDRTWRGMHPTPSSSSSSAASAAAS---------------------TPLPTWSVTGRRGRKRISSAAASTSNSNDEHD
        KCG CG  FR+ KAL+GHMRSHP+R WRGM+P  S+++++AA AA                       +PL TWS T  RGR+ I S+++++S   D  D
Subjt:  KCGLCGKLFRTMKALYGHMRSHPDRTWRGMHPTPSSSSSSAASAAAS---------------------TPLPTWSVTGRRGRKRISSAAASTSNSNDEHD

Query:  SSSKKK----VHVYRCNVCGKEFWSPQALGGHKSS-HYKPEKTDFVVRTSSSGRRTVDFDLNELPPMD
        +  +       + Y C+ CGK F SPQALGGHKSS   KP K            + V FDLNELPP D
Subjt:  SSSKKK----VHVYRCNVCGKEFWSPQALGGHKSS-HYKPEKTDFVVRTSSSGRRTVDFDLNELPPMD

KGN55978.1 hypothetical protein Csa_010625 [Cucumis sativus]1.1e-2140.66Show/hide
Query:  KCGLCGKLFRTMKALYGHMRSHPDRTWRGMHPTPSSSSSSAASAAASTPLPTWSVTGRRGRKR---ISSAAASTSNSNDEHDSS----------------
        KC +C + F ++KALYGHMRSHPDR+W+G+ P  + +SSS  S+++S+PLP+WS T +RG K    IS+AA +  +S+    SS                
Subjt:  KCGLCGKLFRTMKALYGHMRSHPDRTWRGMHPTPSSSSSSAASAAASTPLPTWSVTGRRGRKR---ISSAAASTSNSNDEHDSS----------------

Query:  --------SKKKVH------VYRCNVCGKEFWSPQALGGHKSSHYKPEKTDFVVRTSSS-------GRRTVDFDLNELPPMD
                  KK++      VY+CN C KE+ S QALGGHKS H    K+  ++RTSS+        R+ ++FDLNELP M+
Subjt:  --------SKKKVH------VYRCNVCGKEFWSPQALGGHKSSHYKPEKTDFVVRTSSS-------GRRTVDFDLNELPPMD

XP_008449183.1 PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103491133 [Cucumis melo]8.7e-2442.13Show/hide
Query:  KCGLCGKLFRTMKALYGHMRSHPDRTWRGMHPTPSSSSSSAASAAASTPLPTWSVTGRRGRKRISSAAASTSNSNDEHDSS-------------------
        KC +C + F ++KALYGHMRSHPDR+W+G+ P  S +SSS  S+++S+PLP+WS+T +RG K IS   A+ S+S+    SS                   
Subjt:  KCGLCGKLFRTMKALYGHMRSHPDRTWRGMHPTPSSSSSSAASAAASTPLPTWSVTGRRGRKRISSAAASTSNSNDEHDSS-------------------

Query:  ----SKKKVH------VYRCNVCGKEFWSPQALGGHKSSHYKPEKTDFVVRTSSS-------GRRTVDFDLNELPPMD
              KK++      VY+CN C KE+ S QALGGHKS H    K+  ++RTSS+        R+ ++FDLNELP M+
Subjt:  ----SKKKVH------VYRCNVCGKEFWSPQALGGHKSSHYKPEKTDFVVRTSSS-------GRRTVDFDLNELPPMD

XP_022143488.1 zinc finger protein ZAT3-like [Momordica charantia]4.2e-7196.48Show/hide
Query:  KCGLCGKLFRTMKALYGHMRSHPDRTWRGMHPTPSSSSSSAASAAASTPLPTWSVTGRRGRKRISSAAASTSNSNDEHDSSSKKKVHVYRCNVCGKEFWS
        KCGLCGKLFRTMKALYGHMRSHPDRTWRGMHPTPSSSSS   SAAASTPLPTWSVTGRRGRKR SSAAASTSNSNDEHDSSSKKKVHVYRCNVCGKEFWS
Subjt:  KCGLCGKLFRTMKALYGHMRSHPDRTWRGMHPTPSSSSSSAASAAASTPLPTWSVTGRRGRKRISSAAASTSNSNDEHDSSSKKKVHVYRCNVCGKEFWS

Query:  PQALGGHKSSHYKPEKTDFVVRTSSSGRRTVDFDLNELPPMD
        PQALGGHKSSHYKPEKTDFVV+TSSSGRRTVDFDLNELPPMD
Subjt:  PQALGGHKSSHYKPEKTDFVVRTSSSGRRTVDFDLNELPPMD

XP_022951048.1 zinc finger protein ZAT2-like [Cucurbita moschata]1.8e-2142.01Show/hide
Query:  KCGLCGKLFRTMKALYGHMRSHPDRTWRGMHPTPSSSSSSAASAAAS----------------------TPLPTWSVTGRRGRKRISSAAASTSNSNDEH
        KCG CG  FR+ KAL+GHMRSHP+R WRGM+P  S+++++AA+ AA+                      +PL TWS T  RGR+ I S+++++S   D  
Subjt:  KCGLCGKLFRTMKALYGHMRSHPDRTWRGMHPTPSSSSSSAASAAAS----------------------TPLPTWSVTGRRGRKRISSAAASTSNSNDEH

Query:  DSSSKKK----VHVYRCNVCGKEFWSPQALGGHKSS-HYKPEKTDFVVRTSSSGRRTVDFDLNELPPMD
        D+  +       + Y C+ CGK F SPQALGGHKSS   KP K            + + FDLNELPP D
Subjt:  DSSSKKK----VHVYRCNVCGKEFWSPQALGGHKSS-HYKPEKTDFVVRTSSSGRRTVDFDLNELPPMD

TrEMBL top hitse value%identityAlignment
A0A0A0L2N1 Uncharacterized protein5.1e-2240.66Show/hide
Query:  KCGLCGKLFRTMKALYGHMRSHPDRTWRGMHPTPSSSSSSAASAAASTPLPTWSVTGRRGRKR---ISSAAASTSNSNDEHDSS----------------
        KC +C + F ++KALYGHMRSHPDR+W+G+ P  + +SSS  S+++S+PLP+WS T +RG K    IS+AA +  +S+    SS                
Subjt:  KCGLCGKLFRTMKALYGHMRSHPDRTWRGMHPTPSSSSSSAASAAASTPLPTWSVTGRRGRKR---ISSAAASTSNSNDEHDSS----------------

Query:  --------SKKKVH------VYRCNVCGKEFWSPQALGGHKSSHYKPEKTDFVVRTSSS-------GRRTVDFDLNELPPMD
                  KK++      VY+CN C KE+ S QALGGHKS H    K+  ++RTSS+        R+ ++FDLNELP M+
Subjt:  --------SKKKVH------VYRCNVCGKEFWSPQALGGHKSSHYKPEKTDFVVRTSSS-------GRRTVDFDLNELPPMD

A0A1S3BLH2 LOW QUALITY PROTEIN: uncharacterized protein LOC1034911334.2e-2442.13Show/hide
Query:  KCGLCGKLFRTMKALYGHMRSHPDRTWRGMHPTPSSSSSSAASAAASTPLPTWSVTGRRGRKRISSAAASTSNSNDEHDSS-------------------
        KC +C + F ++KALYGHMRSHPDR+W+G+ P  S +SSS  S+++S+PLP+WS+T +RG K IS   A+ S+S+    SS                   
Subjt:  KCGLCGKLFRTMKALYGHMRSHPDRTWRGMHPTPSSSSSSAASAAASTPLPTWSVTGRRGRKRISSAAASTSNSNDEHDSS-------------------

Query:  ----SKKKVH------VYRCNVCGKEFWSPQALGGHKSSHYKPEKTDFVVRTSSS-------GRRTVDFDLNELPPMD
              KK++      VY+CN C KE+ S QALGGHKS H    K+  ++RTSS+        R+ ++FDLNELP M+
Subjt:  ----SKKKVH------VYRCNVCGKEFWSPQALGGHKSSHYKPEKTDFVVRTSSS-------GRRTVDFDLNELPPMD

A0A2G2WFN4 Uncharacterized protein2.9e-1732.67Show/hide
Query:  CGLCGKLFRTMKALYGHMRSHPDRTWRGMHPTPSSSSSSAASAAASTPLPTWSVTGRRGRKRISSAA---------------------------------
        C +CGK F +MK+L+GHMR HP+R WRG+ P          +      +P WSVT +RGRK  +  A                                 
Subjt:  CGLCGKLFRTMKALYGHMRSHPDRTWRGMHPTPSSSSSSAASAAASTPLPTWSVTGRRGRKRISSAA---------------------------------

Query:  ---------ASTSNSNDEHDSSSKKKV-------HVYRCNVCGKEFWSPQALGGHKSSHYK--------------PEKTDFVVRTSSSGRRTVDFDLNEL
                 + TS + +E+++S+KKK          Y+CN CGK F + QALGGHKSSH K                  D    +S   +R +DFDLNEL
Subjt:  ---------ASTSNSNDEHDSSSKKKV-------HVYRCNVCGKEFWSPQALGGHKSSHYK--------------PEKTDFVVRTSSSGRRTVDFDLNEL

Query:  PP
        PP
Subjt:  PP

A0A6J1CQU4 zinc finger protein ZAT3-like2.1e-7196.48Show/hide
Query:  KCGLCGKLFRTMKALYGHMRSHPDRTWRGMHPTPSSSSSSAASAAASTPLPTWSVTGRRGRKRISSAAASTSNSNDEHDSSSKKKVHVYRCNVCGKEFWS
        KCGLCGKLFRTMKALYGHMRSHPDRTWRGMHPTPSSSSS   SAAASTPLPTWSVTGRRGRKR SSAAASTSNSNDEHDSSSKKKVHVYRCNVCGKEFWS
Subjt:  KCGLCGKLFRTMKALYGHMRSHPDRTWRGMHPTPSSSSSSAASAAASTPLPTWSVTGRRGRKRISSAAASTSNSNDEHDSSSKKKVHVYRCNVCGKEFWS

Query:  PQALGGHKSSHYKPEKTDFVVRTSSSGRRTVDFDLNELPPMD
        PQALGGHKSSHYKPEKTDFVV+TSSSGRRTVDFDLNELPPMD
Subjt:  PQALGGHKSSHYKPEKTDFVVRTSSSGRRTVDFDLNELPPMD

A0A6J1GGL7 zinc finger protein ZAT2-like8.7e-2242.01Show/hide
Query:  KCGLCGKLFRTMKALYGHMRSHPDRTWRGMHPTPSSSSSSAASAAAS----------------------TPLPTWSVTGRRGRKRISSAAASTSNSNDEH
        KCG CG  FR+ KAL+GHMRSHP+R WRGM+P  S+++++AA+ AA+                      +PL TWS T  RGR+ I S+++++S   D  
Subjt:  KCGLCGKLFRTMKALYGHMRSHPDRTWRGMHPTPSSSSSSAASAAAS----------------------TPLPTWSVTGRRGRKRISSAAASTSNSNDEH

Query:  DSSSKKK----VHVYRCNVCGKEFWSPQALGGHKSS-HYKPEKTDFVVRTSSSGRRTVDFDLNELPPMD
        D+  +       + Y C+ CGK F SPQALGGHKSS   KP K            + + FDLNELPP D
Subjt:  DSSSKKK----VHVYRCNVCGKEFWSPQALGGHKSS-HYKPEKTDFVVRTSSSGRRTVDFDLNELPPMD

SwissProt top hitse value%identityAlignment
O65499 Zinc finger protein ZAT37.9e-1235.88Show/hide
Query:  CGLCGKLFRTMKALYGHMRSHPDRTWRGMHPTPSSSSSSAASA-AASTPLPTWSVTGRRGRKRISSAAASTSNSNDEHDSSSKKKVHVYRCNVCGKEFWS
        C  CG+ F + KAL+GHMR HP+R WRG++P P+    +AAS+   +  LP W          ++S     SN      + S   +  + C  C K F S
Subjt:  CGLCGKLFRTMKALYGHMRSHPDRTWRGMHPTPSSSSSSAASA-AASTPLPTWSVTGRRGRKRISSAAASTSNSNDEHDSSSKKKVHVYRCNVCGKEFWS

Query:  PQALGGHKSSHYKPEKTDFVVRTSSSGRRTV
         QALGGH++SH K  K  F +   +    TV
Subjt:  PQALGGHKSSHYKPEKTDFVVRTSSSGRRTV

Q42430 Zinc finger protein 14.1e-0837.5Show/hide
Query:  KCGLCGKLFRTMKALYGHMRSHPDRTWRGMHPTPSSSSSSAASAAASTPLPTWSVTGRRGRKRISSAAASTSNSNDEHDSSSKKKVHVYRCNVCGKEFWS
        KC +CGK F + +AL GH  SH     R   P+P S     A+AA    LP  +          SS AAS+  + +           V+RC++C KEF +
Subjt:  KCGLCGKLFRTMKALYGHMRSHPDRTWRGMHPTPSSSSSSAASAAASTPLPTWSVTGRRGRKRISSAAASTSNSNDEHDSSSKKKVHVYRCNVCGKEFWS

Query:  PQALGGHKSSHY
         QALGGHK  HY
Subjt:  PQALGGHKSSHY

Q75KE5 Zinc finger protein 362.2e-0630.77Show/hide
Query:  KCGLCGKLFRTMKALYGHMRSHPDRTWRGMHPTPSSSSSSAASAAASTPLPTWSVTGRRGRKRISSAAASTSNSNDEHDSSSKKKVHVYRCNVCGKEFWS
        +C +CGK F + +AL GH  SH           PS      A+AAA                      AS  +S ++  SS+      +RC +C + F +
Subjt:  KCGLCGKLFRTMKALYGHMRSHPDRTWRGMHPTPSSSSSSAASAAASTPLPTWSVTGRRGRKRISSAAASTSNSNDEHDSSSKKKVHVYRCNVCGKEFWS

Query:  PQALGGHKSSHYKPEKTDFVVRTSSSGRRTV----DFDLNELP
         QALGGHK  HY  + T   V  S+S         +FDLN +P
Subjt:  PQALGGHKSSHYKPEKTDFVVRTSSSGRRTV----DFDLNELP

Q9SIJ0 Zinc finger protein ZAT27.4e-1037.27Show/hide
Query:  CGLCGKLFRTMKALYGHMRSHPDRTWRGMHPTPSSSSSSAASAAASTPLPTWSVTGRRGRKRISSAAASTSNSNDEHDSSSKKKVHVYRCNVCGKEFWSP
        C  CGK F ++KAL+GHMR HP+R WRG++P PS+      S AAS+   +W  +     +  + A+     +N +  + S +    + C+ C K F S 
Subjt:  CGLCGKLFRTMKALYGHMRSHPDRTWRGMHPTPSSSSSSAASAAASTPLPTWSVTGRRGRKRISSAAASTSNSNDEHDSSSKKKVHVYRCNVCGKEFWSP

Query:  QALGGHKSSH
        QALGGH+++H
Subjt:  QALGGHKSSH

Q9SSW0 Zinc finger protein AZF32.5e-0531.25Show/hide
Query:  KCGLCGKLFRTMKALYGHMRSHPDRTWRGMHPTPSSSSSSAASAAASTPLPTWSVTGRRGRKRISSAAASTSNSNDEHDSSSKKKVHVYRCNVCGKEFWS
        KCG+C K F + +AL GH  SH  R+  G                                             ND+   S+  K HV  C+VCGK F +
Subjt:  KCGLCGKLFRTMKALYGHMRSHPDRTWRGMHPTPSSSSSSAASAAASTPLPTWSVTGRRGRKRISSAAASTSNSNDEHDSSSKKKVHVYRCNVCGKEFWS

Query:  PQALGGHKSSHY-----KPEKTDFVVRTSSSGRRTVDFDLNELP
         QALGGHK  HY       E        SSS  R   FDLN +P
Subjt:  PQALGGHKSSHY-----KPEKTDFVVRTSSSGRRTVDFDLNELP

Arabidopsis top hitse value%identityAlignment
AT2G17180.1 C2H2-like zinc finger protein5.3e-1137.27Show/hide
Query:  CGLCGKLFRTMKALYGHMRSHPDRTWRGMHPTPSSSSSSAASAAASTPLPTWSVTGRRGRKRISSAAASTSNSNDEHDSSSKKKVHVYRCNVCGKEFWSP
        C  CGK F ++KAL+GHMR HP+R WRG++P PS+      S AAS+   +W  +     +  + A+     +N +  + S +    + C+ C K F S 
Subjt:  CGLCGKLFRTMKALYGHMRSHPDRTWRGMHPTPSSSSSSAASAAASTPLPTWSVTGRRGRKRISSAAASTSNSNDEHDSSSKKKVHVYRCNVCGKEFWSP

Query:  QALGGHKSSH
        QALGGH+++H
Subjt:  QALGGHKSSH

AT2G26940.1 C2H2-type zinc finger family protein3.8e-0963.89Show/hide
Query:  KCGLCGKLFRTMKALYGHMRSHPDRTWRGMHPTPSS
        +C LCGK F+TM +L+GHMR HPDRTW+G+ P P S
Subjt:  KCGLCGKLFRTMKALYGHMRSHPDRTWRGMHPTPSS

AT4G35280.1 C2H2-like zinc finger protein5.6e-1335.88Show/hide
Query:  CGLCGKLFRTMKALYGHMRSHPDRTWRGMHPTPSSSSSSAASA-AASTPLPTWSVTGRRGRKRISSAAASTSNSNDEHDSSSKKKVHVYRCNVCGKEFWS
        C  CG+ F + KAL+GHMR HP+R WRG++P P+    +AAS+   +  LP W          ++S     SN      + S   +  + C  C K F S
Subjt:  CGLCGKLFRTMKALYGHMRSHPDRTWRGMHPTPSSSSSSAASA-AASTPLPTWSVTGRRGRKRISSAAASTSNSNDEHDSSSKKKVHVYRCNVCGKEFWS

Query:  PQALGGHKSSHYKPEKTDFVVRTSSSGRRTV
         QALGGH++SH K  K  F +   +    TV
Subjt:  PQALGGHKSSHYKPEKTDFVVRTSSSGRRTV

AT5G43170.1 zinc-finger protein 31.8e-0631.25Show/hide
Query:  KCGLCGKLFRTMKALYGHMRSHPDRTWRGMHPTPSSSSSSAASAAASTPLPTWSVTGRRGRKRISSAAASTSNSNDEHDSSSKKKVHVYRCNVCGKEFWS
        KCG+C K F + +AL GH  SH  R+  G                                             ND+   S+  K HV  C+VCGK F +
Subjt:  KCGLCGKLFRTMKALYGHMRSHPDRTWRGMHPTPSSSSSSAASAAASTPLPTWSVTGRRGRKRISSAAASTSNSNDEHDSSSKKKVHVYRCNVCGKEFWS

Query:  PQALGGHKSSHY-----KPEKTDFVVRTSSSGRRTVDFDLNELP
         QALGGHK  HY       E        SSS  R   FDLN +P
Subjt:  PQALGGHKSSHY-----KPEKTDFVVRTSSSGRRTVDFDLNELP

AT5G56200.1 C2H2 type zinc finger transcription factor family7.9e-0729.45Show/hide
Query:  CGLCGKLFRTMKALYGHMRSHPDRTWRGMHPTPSSSSSSAASAAASTPLPTWSVTGRRGRKRISSAAASTSNSNDEHDSSSKKKVHVYRCNVCGKEFWSP
        C  C K F + +AL GH  SH        H   +++ +S     A        +TG      ++SA  + ++ +  H+       HV  CN+C K F + 
Subjt:  CGLCGKLFRTMKALYGHMRSHPDRTWRGMHPTPSSSSSSAASAAASTPLPTWSVTGRRGRKRISSAAASTSNSNDEHDSSSKKKVHVYRCNVCGKEFWSP

Query:  QALGGHKSSHYK-----------PEKTDFVVRTSSSG-------------RRTVDFDLNELPP
        QALGGHK  H+            P     V  T+SS              RR ++FDLNELPP
Subjt:  QALGGHKSSHYK-----------PEKTDFVVRTSSSG-------------RRTVDFDLNELPP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAATGTGGACTCTGCGGTAAGCTTTTCAGAACCATGAAGGCCTTGTATGGCCATATGAGGTCTCATCCTGATCGCACATGGAGGGGAATGCACCCCACCCCGAGCTCCTC
GTCCTCCTCCGCCGCTTCTGCCGCTGCCTCTACCCCGCTGCCGACCTGGTCAGTCACCGGCAGAAGAGGGCGGAAGAGGATTTCTTCTGCTGCAGCCTCGACTTCTAATT
CTAATGATGAGCATGACTCGTCATCGAAAAAGAAGGTGCACGTGTATAGATGTAATGTCTGCGGCAAGGAATTCTGGTCTCCACAGGCGCTGGGAGGCCATAAGTCCAGC
CACTACAAGCCTGAAAAGACCGACTTTGTGGTTCGAACGTCGTCGAGTGGTCGGAGGACGGTGGATTTTGATCTGAATGAGCTGCCGCCGATGGAC
mRNA sequenceShow/hide mRNA sequence
AAATGTGGACTCTGCGGTAAGCTTTTCAGAACCATGAAGGCCTTGTATGGCCATATGAGGTCTCATCCTGATCGCACATGGAGGGGAATGCACCCCACCCCGAGCTCCTC
GTCCTCCTCCGCCGCTTCTGCCGCTGCCTCTACCCCGCTGCCGACCTGGTCAGTCACCGGCAGAAGAGGGCGGAAGAGGATTTCTTCTGCTGCAGCCTCGACTTCTAATT
CTAATGATGAGCATGACTCGTCATCGAAAAAGAAGGTGCACGTGTATAGATGTAATGTCTGCGGCAAGGAATTCTGGTCTCCACAGGCGCTGGGAGGCCATAAGTCCAGC
CACTACAAGCCTGAAAAGACCGACTTTGTGGTTCGAACGTCGTCGAGTGGTCGGAGGACGGTGGATTTTGATCTGAATGAGCTGCCGCCGATGGAC
Protein sequenceShow/hide protein sequence
KCGLCGKLFRTMKALYGHMRSHPDRTWRGMHPTPSSSSSSAASAAASTPLPTWSVTGRRGRKRISSAAASTSNSNDEHDSSSKKKVHVYRCNVCGKEFWSPQALGGHKSS
HYKPEKTDFVVRTSSSGRRTVDFDLNELPPMD