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MS023309 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS023309
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionPMD domain-containing protein
Genome locationscaffold101:560654..560776
RNA-Seq ExpressionMS023309
SyntenyMS023309
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0056623.1 girdin-like [Cucumis melo var. makuwa]8.4e-0461.9Show/hide
Query:  VDPIVSLLAE-FCFLNYCRTKGTWKFLGCAQLLYIWILSHIK
        V+PI+ +LA+ F  LNYCR KG  KF  C  LLYIWI SHIK
Subjt:  VDPIVSLLAE-FCFLNYCRTKGTWKFLGCAQLLYIWILSHIK
MBA0880410.1 hypothetical protein [Gossypium schwendimanii]1.7e-0457.5Show/hide
Query:  VDPIVSLLAE-FCFLNYCRTKGTWKFLGCAQLLYIWILSH
        ++P+ ++LAE F  LN CR KG W+F+GCAQLL +WI SH
Subjt:  VDPIVSLLAE-FCFLNYCRTKGTWKFLGCAQLLYIWILSH
XP_022147190.1 uncharacterized protein LOC111016201 [Momordica charantia]3.4e-0563.41Show/hide
Query:  VDPIVSLLAE-FCFLNYCRTKGTWKFLGCAQLLYIWILSHI
        V+ ++ +LAE F  LN+CR++G  KF+GCAQLLYIWILSHI
Subjt:  VDPIVSLLAE-FCFLNYCRTKGTWKFLGCAQLLYIWILSHI
XP_022150759.1 uncharacterized protein LOC111018820 [Momordica charantia]3.4e-0563.41Show/hide
Query:  VDPIVSLLAE-FCFLNYCRTKGTWKFLGCAQLLYIWILSHI
        V+ ++ +LAE F  LN+CR++G  KF+GCAQLLYIWILSHI
Subjt:  VDPIVSLLAE-FCFLNYCRTKGTWKFLGCAQLLYIWILSHI
TrEMBL top hitse value%identityAlignment
A0A061FPA7 Uncharacterized protein6.9e-0454.76Show/hide
Query:  VDPIVSLLAE-FCFLNYCRTKGTWKFLGCAQLLYIWILSHIK
        ++P+ S+LA+ F  LN+CR KG  +F+GCAQLL IWI SH +
Subjt:  VDPIVSLLAE-FCFLNYCRTKGTWKFLGCAQLLYIWILSHIK
A0A5A7UL51 Girdin-like4.1e-0461.9Show/hide
Query:  VDPIVSLLAE-FCFLNYCRTKGTWKFLGCAQLLYIWILSHIK
        V+PI+ +LA+ F  LNYCR KG  KF  C  LLYIWI SHIK
Subjt:  VDPIVSLLAE-FCFLNYCRTKGTWKFLGCAQLLYIWILSHIK
A0A6J1CZG4 uncharacterized protein LOC1110162011.6e-0563.41Show/hide
Query:  VDPIVSLLAE-FCFLNYCRTKGTWKFLGCAQLLYIWILSHI
        V+ ++ +LAE F  LN+CR++G  KF+GCAQLLYIWILSHI
Subjt:  VDPIVSLLAE-FCFLNYCRTKGTWKFLGCAQLLYIWILSHI
A0A6J1DB13 uncharacterized protein LOC1110188201.6e-0563.41Show/hide
Query:  VDPIVSLLAE-FCFLNYCRTKGTWKFLGCAQLLYIWILSHI
        V+ ++ +LAE F  LN+CR++G  KF+GCAQLLYIWILSHI
Subjt:  VDPIVSLLAE-FCFLNYCRTKGTWKFLGCAQLLYIWILSHI
A0A7J9NAZ6 Uncharacterized protein8.2e-0557.5Show/hide
Query:  VDPIVSLLAE-FCFLNYCRTKGTWKFLGCAQLLYIWILSH
        ++P+ ++LAE F  LN CR KG W+F+GCAQLL +WI SH
Subjt:  VDPIVSLLAE-FCFLNYCRTKGTWKFLGCAQLLYIWILSH
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTTGATCCTATTGTATCTCTGTTAGCAGAATTCTGTTTTCTAAATTATTGTAGAACAAAAGGAACATGGAAGTTTTTAGGATGTGCACAATTATTGTACATTTGGATTCT
TAGTCATATAAAG
mRNA sequenceShow/hide mRNA sequence
GTTGATCCTATTGTATCTCTGTTAGCAGAATTCTGTTTTCTAAATTATTGTAGAACAAAAGGAACATGGAAGTTTTTAGGATGTGCACAATTATTGTACATTTGGATTCT
TAGTCATATAAAG
Protein sequenceShow/hide protein sequence
VDPIVSLLAEFCFLNYCRTKGTWKFLGCAQLLYIWILSHIK