; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS023322 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS023322
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionTransmembrane protein
Genome locationscaffold101:872656..873231
RNA-Seq ExpressionMS023322
SyntenyMS023322
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650098.1 hypothetical protein Csa_010636 [Cucumis sativus]5.6e-6671.35Show/hide
Query:  MGLSIAAAAPPGSASRSHHRTHKIFLFCNYVLLGAASSCIFLTLSLRLLPSVCGISLVFLHAITIAAAVSGCTMVGSGSARWFGAHMVVTVMAAIFQGSV
        MG SI  + P  S +RSH+ THK+FL+ NY+LLGAASSCIFLTLSLRLLPS+CG+SL+FLH +TIAAAVSGC M  + S RWFG HMV TV+ AIFQGSV
Subjt:  MGLSIAAAAPPGSASRSHHRTHKIFLFCNYVLLGAASSCIFLTLSLRLLPSVCGISLVFLHAITIAAAVSGCTMVGSGSARWFGAHMVVTVMAAIFQGSV

Query:  AVLAYTRTGEFLGEMKTYVRAEDAAVILKLAGGLSVAMFWLEWVALTLAFFLRYYAFVEEEQGGGVVGLRRSCAKVQQDDQDLKDWPWPFQV
        A+L YTRTG+FL E+K+YVR ED AVILKLAGGLSV MF LEWV LTLAFFLRYYAFVEE  G    G     AKVQQ D+DLKDWPWPFQ+
Subjt:  AVLAYTRTGEFLGEMKTYVRAEDAAVILKLAGGLSVAMFWLEWVALTLAFFLRYYAFVEEEQGGGVVGLRRSCAKVQQDDQDLKDWPWPFQV

XP_004148268.1 uncharacterized protein LOC101206234 [Cucumis sativus]2.5e-6671.88Show/hide
Query:  MGLSIAAAAPPGSASRSHHRTHKIFLFCNYVLLGAASSCIFLTLSLRLLPSVCGISLVFLHAITIAAAVSGCTMVGSGSARWFGAHMVVTVMAAIFQGSV
        MG SI  + P  S +RSH+ THK+FL+ NY+LLGAASSCIFLTLSLRLLPS+CG+SL+FLH +TIAAAVSGC M  + S RWFG HMV TV+ AIFQGSV
Subjt:  MGLSIAAAAPPGSASRSHHRTHKIFLFCNYVLLGAASSCIFLTLSLRLLPSVCGISLVFLHAITIAAAVSGCTMVGSGSARWFGAHMVVTVMAAIFQGSV

Query:  AVLAYTRTGEFLGEMKTYVRAEDAAVILKLAGGLSVAMFWLEWVALTLAFFLRYYAFVEEEQGGGVVGLRRSCAKVQQDDQDLKDWPWPFQV
        A+L YTRTG+FL E+K+YVR ED AVILKLAGGLSV MF LEWV LTLAFFLRYYAFVEE  G    G     AKVQQ D+DLKDWPWPFQV
Subjt:  AVLAYTRTGEFLGEMKTYVRAEDAAVILKLAGGLSVAMFWLEWVALTLAFFLRYYAFVEEEQGGGVVGLRRSCAKVQQDDQDLKDWPWPFQV

XP_023005568.1 uncharacterized protein LOC111498512 [Cucurbita maxima]4.3e-6670.98Show/hide
Query:  MGLSIAAAAPPG-SASRSHHRTHKIFLFCNYVLLGAASSCIFLTLSLRLLPSVCGISLVFLHAITIAAAVSGCTMVGSGSARWFGAHMVVTVMAAIFQGS
        MG SI+       S SRSH+ THK+FL+ NY+LLGAASSCIFLTLSLRLLPS+CG+SL+FLH +TIAAAVSGC M  + S RWFG HMV TV+ AIFQGS
Subjt:  MGLSIAAAAPPG-SASRSHHRTHKIFLFCNYVLLGAASSCIFLTLSLRLLPSVCGISLVFLHAITIAAAVSGCTMVGSGSARWFGAHMVVTVMAAIFQGS

Query:  VAVLAYTRTGEFLGEMKTYVRAEDAAVILKLAGGLSVAMFWLEWVALTLAFFLRYYAFVEEEQGGGVVGLRRSCAKVQQDDQDLKDWPWPFQV
        VAVL YTRTG+FLGE+K+YVR ED AVILKLAGGLSV MF LEWV LTLAFFL+YYAFVE   G G        AKV+Q D+DLKDWPWPFQV
Subjt:  VAVLAYTRTGEFLGEMKTYVRAEDAAVILKLAGGLSVAMFWLEWVALTLAFFLRYYAFVEEEQGGGVVGLRRSCAKVQQDDQDLKDWPWPFQV

XP_023540529.1 uncharacterized protein LOC111800866 [Cucurbita pepo subsp. pepo]5.6e-6670.98Show/hide
Query:  MGLSIAAAAPPG-SASRSHHRTHKIFLFCNYVLLGAASSCIFLTLSLRLLPSVCGISLVFLHAITIAAAVSGCTMVGSGSARWFGAHMVVTVMAAIFQGS
        MG SI+       S SRSH+ THK+FL+ NY+LLGAASSCIFLTLSLRLLPS+CG+SL+FLH +TIAAAVSGC M  + S RWFG HMV TV+ AIFQGS
Subjt:  MGLSIAAAAPPG-SASRSHHRTHKIFLFCNYVLLGAASSCIFLTLSLRLLPSVCGISLVFLHAITIAAAVSGCTMVGSGSARWFGAHMVVTVMAAIFQGS

Query:  VAVLAYTRTGEFLGEMKTYVRAEDAAVILKLAGGLSVAMFWLEWVALTLAFFLRYYAFVEEEQGGGVVGLRRSCAKVQQDDQDLKDWPWPFQV
        VAVL YTRTG+FLGE+K+YVR ED AVILKLAGGLSV MF LEWV LTLAFFL+YYAFVE   G G        AKV+Q D+DLKDWPWPFQV
Subjt:  VAVLAYTRTGEFLGEMKTYVRAEDAAVILKLAGGLSVAMFWLEWVALTLAFFLRYYAFVEEEQGGGVVGLRRSCAKVQQDDQDLKDWPWPFQV

XP_038904159.1 uncharacterized protein LOC120090516 [Benincasa hispida]8.6e-6771.88Show/hide
Query:  MGLSIAAAAPPGSASRSHHRTHKIFLFCNYVLLGAASSCIFLTLSLRLLPSVCGISLVFLHAITIAAAVSGCTMVGSGSARWFGAHMVVTVMAAIFQGSV
        MG SI  A P  S SRSH+ THK+FL+ NY+LLGAASSCIFLTLSLRLLPS+CG+SL+FLH +TIAAAVSGC M  + SARWFG HMV TV+ AIFQGSV
Subjt:  MGLSIAAAAPPGSASRSHHRTHKIFLFCNYVLLGAASSCIFLTLSLRLLPSVCGISLVFLHAITIAAAVSGCTMVGSGSARWFGAHMVVTVMAAIFQGSV

Query:  AVLAYTRTGEFLGEMKTYVRAEDAAVILKLAGGLSVAMFWLEWVALTLAFFLRYYAFVEEEQGGGVVGLRRSCAKVQQDDQDLKDWPWPFQV
        A+L +TRTG+FL E+K+YVR ED AVILKLAGGLSV MF LEWV LTLAFFL+YYAFVE E      G+    AKVQQ D+DLKDWPWPFQV
Subjt:  AVLAYTRTGEFLGEMKTYVRAEDAAVILKLAGGLSVAMFWLEWVALTLAFFLRYYAFVEEEQGGGVVGLRRSCAKVQQDDQDLKDWPWPFQV

TrEMBL top hitse value%identityAlignment
A0A0A0L253 Uncharacterized protein1.2e-6671.88Show/hide
Query:  MGLSIAAAAPPGSASRSHHRTHKIFLFCNYVLLGAASSCIFLTLSLRLLPSVCGISLVFLHAITIAAAVSGCTMVGSGSARWFGAHMVVTVMAAIFQGSV
        MG SI  + P  S +RSH+ THK+FL+ NY+LLGAASSCIFLTLSLRLLPS+CG+SL+FLH +TIAAAVSGC M  + S RWFG HMV TV+ AIFQGSV
Subjt:  MGLSIAAAAPPGSASRSHHRTHKIFLFCNYVLLGAASSCIFLTLSLRLLPSVCGISLVFLHAITIAAAVSGCTMVGSGSARWFGAHMVVTVMAAIFQGSV

Query:  AVLAYTRTGEFLGEMKTYVRAEDAAVILKLAGGLSVAMFWLEWVALTLAFFLRYYAFVEEEQGGGVVGLRRSCAKVQQDDQDLKDWPWPFQV
        A+L YTRTG+FL E+K+YVR ED AVILKLAGGLSV MF LEWV LTLAFFLRYYAFVEE  G    G     AKVQQ D+DLKDWPWPFQV
Subjt:  AVLAYTRTGEFLGEMKTYVRAEDAAVILKLAGGLSVAMFWLEWVALTLAFFLRYYAFVEEEQGGGVVGLRRSCAKVQQDDQDLKDWPWPFQV

A0A1S3BL21 uncharacterized protein LOC1034910041.0e-6571.35Show/hide
Query:  MGLSIAAAAPPGSASRSHHRTHKIFLFCNYVLLGAASSCIFLTLSLRLLPSVCGISLVFLHAITIAAAVSGCTMVGSGSARWFGAHMVVTVMAAIFQGSV
        MG SI  + P  S +RSH+ THK+FL+ NY+LLGAASSCIFLTLSLRLLPS+CG+SL+FLH +TIAAAVSGC M  + S RWFG HMV TV+ AIFQGSV
Subjt:  MGLSIAAAAPPGSASRSHHRTHKIFLFCNYVLLGAASSCIFLTLSLRLLPSVCGISLVFLHAITIAAAVSGCTMVGSGSARWFGAHMVVTVMAAIFQGSV

Query:  AVLAYTRTGEFLGEMKTYVRAEDAAVILKLAGGLSVAMFWLEWVALTLAFFLRYYAFVEEEQGGGVVGLRRSCAKVQQDDQDLKDWPWPFQV
        A+L YTRTG+FL E+K+YVR ED AVILKLAGGLSV MF LEWV LTLAFFLRYYAFVE + G    G     AKVQQ D+DLKDWPWPFQV
Subjt:  AVLAYTRTGEFLGEMKTYVRAEDAAVILKLAGGLSVAMFWLEWVALTLAFFLRYYAFVEEEQGGGVVGLRRSCAKVQQDDQDLKDWPWPFQV

A0A5D3D734 Uncharacterized protein1.0e-6571.35Show/hide
Query:  MGLSIAAAAPPGSASRSHHRTHKIFLFCNYVLLGAASSCIFLTLSLRLLPSVCGISLVFLHAITIAAAVSGCTMVGSGSARWFGAHMVVTVMAAIFQGSV
        MG SI  + P  S +RSH+ THK+FL+ NY+LLGAASSCIFLTLSLRLLPS+CG+SL+FLH +TIAAAVSGC M  + S RWFG HMV TV+ AIFQGSV
Subjt:  MGLSIAAAAPPGSASRSHHRTHKIFLFCNYVLLGAASSCIFLTLSLRLLPSVCGISLVFLHAITIAAAVSGCTMVGSGSARWFGAHMVVTVMAAIFQGSV

Query:  AVLAYTRTGEFLGEMKTYVRAEDAAVILKLAGGLSVAMFWLEWVALTLAFFLRYYAFVEEEQGGGVVGLRRSCAKVQQDDQDLKDWPWPFQV
        A+L YTRTG+FL E+K+YVR ED AVILKLAGGLSV MF LEWV LTLAFFLRYYAFVE + G    G     AKVQQ D+DLKDWPWPFQV
Subjt:  AVLAYTRTGEFLGEMKTYVRAEDAAVILKLAGGLSVAMFWLEWVALTLAFFLRYYAFVEEEQGGGVVGLRRSCAKVQQDDQDLKDWPWPFQV

A0A6J1H1G8 uncharacterized protein LOC1114594672.7e-6670.98Show/hide
Query:  MGLSIAAAAPPG-SASRSHHRTHKIFLFCNYVLLGAASSCIFLTLSLRLLPSVCGISLVFLHAITIAAAVSGCTMVGSGSARWFGAHMVVTVMAAIFQGS
        MG SI+       S SRSH+ THK+FL+ NY+LLGAASSCIFLTLSLRLLPS+CG+SL+FLH +TIAAAVSGC M  + S RWFG HMV TV+ AIFQGS
Subjt:  MGLSIAAAAPPG-SASRSHHRTHKIFLFCNYVLLGAASSCIFLTLSLRLLPSVCGISLVFLHAITIAAAVSGCTMVGSGSARWFGAHMVVTVMAAIFQGS

Query:  VAVLAYTRTGEFLGEMKTYVRAEDAAVILKLAGGLSVAMFWLEWVALTLAFFLRYYAFVEEEQGGGVVGLRRSCAKVQQDDQDLKDWPWPFQV
        VAVL YTRTG+FLGE+K+YVR ED AVILKLAGGLSV MF LEWV LTLAFFL+YYAFVE   G G        AKV+Q D+DLKDWPWPFQV
Subjt:  VAVLAYTRTGEFLGEMKTYVRAEDAAVILKLAGGLSVAMFWLEWVALTLAFFLRYYAFVEEEQGGGVVGLRRSCAKVQQDDQDLKDWPWPFQV

A0A6J1L2J4 uncharacterized protein LOC1114985122.1e-6670.98Show/hide
Query:  MGLSIAAAAPPG-SASRSHHRTHKIFLFCNYVLLGAASSCIFLTLSLRLLPSVCGISLVFLHAITIAAAVSGCTMVGSGSARWFGAHMVVTVMAAIFQGS
        MG SI+       S SRSH+ THK+FL+ NY+LLGAASSCIFLTLSLRLLPS+CG+SL+FLH +TIAAAVSGC M  + S RWFG HMV TV+ AIFQGS
Subjt:  MGLSIAAAAPPG-SASRSHHRTHKIFLFCNYVLLGAASSCIFLTLSLRLLPSVCGISLVFLHAITIAAAVSGCTMVGSGSARWFGAHMVVTVMAAIFQGS

Query:  VAVLAYTRTGEFLGEMKTYVRAEDAAVILKLAGGLSVAMFWLEWVALTLAFFLRYYAFVEEEQGGGVVGLRRSCAKVQQDDQDLKDWPWPFQV
        VAVL YTRTG+FLGE+K+YVR ED AVILKLAGGLSV MF LEWV LTLAFFL+YYAFVE   G G        AKV+Q D+DLKDWPWPFQV
Subjt:  VAVLAYTRTGEFLGEMKTYVRAEDAAVILKLAGGLSVAMFWLEWVALTLAFFLRYYAFVEEEQGGGVVGLRRSCAKVQQDDQDLKDWPWPFQV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G02640.1 unknown protein4.9e-5257.92Show/hide
Query:  PPGSASRSHHRTHKIFLFCNYVLLGAASSCIFLTLSLRLLPSVCGISLVFLHAITIAAAVSGCTMVGSGSARWFGAHMVVTVMAAIFQGSVAVLAYTRTG
        P  S   SH+ THK+FL  NYVLLGA+SSCIFLTLSLRL+PS+CG  L+ LHA TIAAAVSGC     G  RW+ AHM+ TV+ AIFQGSV+VL +T T 
Subjt:  PPGSASRSHHRTHKIFLFCNYVLLGAASSCIFLTLSLRLLPSVCGISLVFLHAITIAAAVSGCTMVGSGSARWFGAHMVVTVMAAIFQGSVAVLAYTRTG

Query:  EFLGEMKTYVRAEDAAVILKLAGGLSVAMFWLEWVALTLAFFLRYYAFVEEEQGGGVVGLRRSCAKVQQDDQDLKDWPWPFQV
         FL  + +YVR ++A++ILKLAGGL V +F LEW+ L LAFFL+YYA+V+ +  G  V ++R+  KV Q ++ LK+ PW FQV
Subjt:  EFLGEMKTYVRAEDAAVILKLAGGLSVAMFWLEWVALTLAFFLRYYAFVEEEQGGGVVGLRRSCAKVQQDDQDLKDWPWPFQV

AT5G16250.1 unknown protein2.3e-5760.64Show/hide
Query:  IAAAAPPGSASRSHHRTHKIFLFCNYVLLGAASSCIFLTLSLRLLPSVCGISLVFLHAITIAAAVSGCTMVGSGSARWFGAHMVVTVMAAIFQGSVAVLA
        I++++P      SH+ THKIFLF NY+LLGAASSCIFLTLSLRL+PS+CG  L+ LHA TIAAAVSGC     G  RW+ AHMV TV+ AIFQGSV+VL 
Subjt:  IAAAAPPGSASRSHHRTHKIFLFCNYVLLGAASSCIFLTLSLRLLPSVCGISLVFLHAITIAAAVSGCTMVGSGSARWFGAHMVVTVMAAIFQGSVAVLA

Query:  YTRTGEFLGEMKTYVRAEDAAVILKLAGGLSVAMFWLEWVALTLAFFLRYYAFVEEEQGGGVVGLRRSCAKVQQDDQDLKDWPWPFQV
        +T T +FLG +K+YVR EDAAVILKL GGL + +F L+W+ L  AFFL+YYA+V+   GG  V ++R+  KVQ ++   KDWPWPFQV
Subjt:  YTRTGEFLGEMKTYVRAEDAAVILKLAGGLSVAMFWLEWVALTLAFFLRYYAFVEEEQGGGVVGLRRSCAKVQQDDQDLKDWPWPFQV

AT5G36710.1 unknown protein2.8e-4754.89Show/hide
Query:  SRSHHRTHKIFLFCNYVLLGAASSCIFLTLSLRLLPSVCGISLVFLHAITIAAAVSGCTMVGS-----GSARWFGAHMVVTVMAAIFQGSVAVLAYTRTG
        S+S   TH IFL CNY+LLG+ASSCIFLT+SLRL PS+ G+SL+FL+ +TIA AVSGC++  S      S R +G+HMV TV+ AIFQG+V+VL +TRTG
Subjt:  SRSHHRTHKIFLFCNYVLLGAASSCIFLTLSLRLLPSVCGISLVFLHAITIAAAVSGCTMVGS-----GSARWFGAHMVVTVMAAIFQGSVAVLAYTRTG

Query:  EFLGEMKTYVRAEDAAVILKLAGGLSVAMFWLEWVALTLAFFLRYYAFVEEEQGGGVVGLRRSCAKVQQDDQDLKDWP-WPFQV
        +FL  +K+YVR ED  VILKL+GGL V MF LEW+ L LAF L+Y  +++E        +     KV++ ++DLKDWP +PFQ+
Subjt:  EFLGEMKTYVRAEDAAVILKLAGGLSVAMFWLEWVALTLAFFLRYYAFVEEEQGGGVVGLRRSCAKVQQDDQDLKDWP-WPFQV

AT5G36800.1 unknown protein2.8e-4754.89Show/hide
Query:  SRSHHRTHKIFLFCNYVLLGAASSCIFLTLSLRLLPSVCGISLVFLHAITIAAAVSGCTMVGS-----GSARWFGAHMVVTVMAAIFQGSVAVLAYTRTG
        S+S   TH IFL CNY+LLG+ASSCIFLT+SLRL PS+ G+SL+FL+ +TIA AVSGC++  S      S R +G+HMV TV+ AIFQG+V+VL +TRTG
Subjt:  SRSHHRTHKIFLFCNYVLLGAASSCIFLTLSLRLLPSVCGISLVFLHAITIAAAVSGCTMVGS-----GSARWFGAHMVVTVMAAIFQGSVAVLAYTRTG

Query:  EFLGEMKTYVRAEDAAVILKLAGGLSVAMFWLEWVALTLAFFLRYYAFVEEEQGGGVVGLRRSCAKVQQDDQDLKDWP-WPFQV
        +FL  +K+YVR ED  VILKL+GGL V MF LEW+ L LAF L+Y  +++E        +     KV++ ++DLKDWP +PFQ+
Subjt:  EFLGEMKTYVRAEDAAVILKLAGGLSVAMFWLEWVALTLAFFLRYYAFVEEEQGGGVVGLRRSCAKVQQDDQDLKDWP-WPFQV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTCTGTCCATAGCCGCCGCGGCGCCACCGGGTTCGGCGAGCCGATCCCACCACCGCACCCACAAGATCTTCCTTTTCTGCAACTACGTGCTCCTCGGGGCCGCGTC
GAGCTGCATCTTCCTCACGCTCTCGCTCCGCCTCCTCCCCTCCGTCTGCGGGATCTCCCTCGTCTTCCTCCACGCCATCACCATCGCGGCCGCCGTGTCGGGGTGCACGA
TGGTGGGGTCGGGGTCGGCGCGGTGGTTCGGGGCGCACATGGTGGTGACGGTGATGGCGGCGATATTCCAGGGGTCGGTGGCGGTGCTGGCGTACACGAGGACCGGGGAG
TTTCTCGGGGAGATGAAGACGTACGTGAGGGCGGAGGATGCGGCGGTGATTCTGAAGCTGGCCGGAGGGCTGAGCGTTGCTATGTTTTGGTTGGAGTGGGTGGCTCTGAC
GCTGGCGTTTTTCTTGAGGTATTATGCGTTTGTTGAAGAAGAACAAGGAGGAGGAGTTGTGGGTTTGAGGAGGAGTTGTGCTAAAGTGCAGCAGGATGATCAGGATTTGA
AGGACTGGCCATGGCCATTTCAAGTT
mRNA sequenceShow/hide mRNA sequence
ATGGGTCTGTCCATAGCCGCCGCGGCGCCACCGGGTTCGGCGAGCCGATCCCACCACCGCACCCACAAGATCTTCCTTTTCTGCAACTACGTGCTCCTCGGGGCCGCGTC
GAGCTGCATCTTCCTCACGCTCTCGCTCCGCCTCCTCCCCTCCGTCTGCGGGATCTCCCTCGTCTTCCTCCACGCCATCACCATCGCGGCCGCCGTGTCGGGGTGCACGA
TGGTGGGGTCGGGGTCGGCGCGGTGGTTCGGGGCGCACATGGTGGTGACGGTGATGGCGGCGATATTCCAGGGGTCGGTGGCGGTGCTGGCGTACACGAGGACCGGGGAG
TTTCTCGGGGAGATGAAGACGTACGTGAGGGCGGAGGATGCGGCGGTGATTCTGAAGCTGGCCGGAGGGCTGAGCGTTGCTATGTTTTGGTTGGAGTGGGTGGCTCTGAC
GCTGGCGTTTTTCTTGAGGTATTATGCGTTTGTTGAAGAAGAACAAGGAGGAGGAGTTGTGGGTTTGAGGAGGAGTTGTGCTAAAGTGCAGCAGGATGATCAGGATTTGA
AGGACTGGCCATGGCCATTTCAAGTT
Protein sequenceShow/hide protein sequence
MGLSIAAAAPPGSASRSHHRTHKIFLFCNYVLLGAASSCIFLTLSLRLLPSVCGISLVFLHAITIAAAVSGCTMVGSGSARWFGAHMVVTVMAAIFQGSVAVLAYTRTGE
FLGEMKTYVRAEDAAVILKLAGGLSVAMFWLEWVALTLAFFLRYYAFVEEEQGGGVVGLRRSCAKVQQDDQDLKDWPWPFQV