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MS023326 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS023326
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Description50S ribosomal protein L33, chloroplastic
Genome locationscaffold378:21254..21343
RNA-Seq ExpressionMS023326
SyntenyMS023326
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001705 - Ribosomal protein L33
IPR011332 - Zinc-binding ribosomal protein
IPR038584 - Ribosomal protein L33 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
YP_009004065.1 ribosomal protein L33 [Cucumis hystrix]4.1e-0890Show/hide
Query:  ENKHNTPCRLELRKFCPRCYKHTIHGEIKK
        +N+HNTP RLELRKFCPRCYKHTIHGEIKK
Subjt:  ENKHNTPCRLELRKFCPRCYKHTIHGEIKK
YP_009439999.1 ribosomal protein L33 [Gynostemma pentagynum]4.1e-0890Show/hide
Query:  ENKHNTPCRLELRKFCPRCYKHTIHGEIKK
        +N+HNTP RLELRKFCPRCYKHTIHGEIKK
Subjt:  ENKHNTPCRLELRKFCPRCYKHTIHGEIKK
YP_009456082.1 ribosomal protein L33 [Momordica charantia]4.1e-0890Show/hide
Query:  ENKHNTPCRLELRKFCPRCYKHTIHGEIKK
        +N+HNTP RLELRKFCPRCYKHTIHGEIKK
Subjt:  ENKHNTPCRLELRKFCPRCYKHTIHGEIKK
YP_009650567.1 ribosomal protein L33 [Rubus coreanus]4.1e-0890Show/hide
Query:  ENKHNTPCRLELRKFCPRCYKHTIHGEIKK
        +N+HNTP RLELRKFCPRCYKHTIHGEIKK
Subjt:  ENKHNTPCRLELRKFCPRCYKHTIHGEIKK
YP_009752264.1 ribosomal protein L33 [Trichosanthes baviensis]4.1e-0890Show/hide
Query:  ENKHNTPCRLELRKFCPRCYKHTIHGEIKK
        +N+HNTP RLELRKFCPRCYKHTIHGEIKK
Subjt:  ENKHNTPCRLELRKFCPRCYKHTIHGEIKK
TrEMBL top hitse value%identityAlignment
A0A1X9Q1M1 50S ribosomal protein L33, chloroplastic2.0e-0890Show/hide
Query:  ENKHNTPCRLELRKFCPRCYKHTIHGEIKK
        +N+HNTP RLELRKFCPRCYKHTIHGEIKK
Subjt:  ENKHNTPCRLELRKFCPRCYKHTIHGEIKK
A0A218KG47 50S ribosomal protein L33, chloroplastic2.0e-0890Show/hide
Query:  ENKHNTPCRLELRKFCPRCYKHTIHGEIKK
        +N+HNTP RLELRKFCPRCYKHTIHGEIKK
Subjt:  ENKHNTPCRLELRKFCPRCYKHTIHGEIKK
A0A249RZI5 50S ribosomal protein L33, chloroplastic2.0e-0890Show/hide
Query:  ENKHNTPCRLELRKFCPRCYKHTIHGEIKK
        +N+HNTP RLELRKFCPRCYKHTIHGEIKK
Subjt:  ENKHNTPCRLELRKFCPRCYKHTIHGEIKK
A0A410HFB3 50S ribosomal protein L33, chloroplastic2.0e-0890Show/hide
Query:  ENKHNTPCRLELRKFCPRCYKHTIHGEIKK
        +N+HNTP RLELRKFCPRCYKHTIHGEIKK
Subjt:  ENKHNTPCRLELRKFCPRCYKHTIHGEIKK
G3ETR8 50S ribosomal protein L33, chloroplastic2.0e-0890Show/hide
Query:  ENKHNTPCRLELRKFCPRCYKHTIHGEIKK
        +N+HNTP RLELRKFCPRCYKHTIHGEIKK
Subjt:  ENKHNTPCRLELRKFCPRCYKHTIHGEIKK
SwissProt top hitse value%identityAlignment
A4QJD6 50S ribosomal protein L33, chloroplastic3.5e-1086.67Show/hide
Query:  ENKHNTPCRLELRKFCPRCYKHTIHGEIKK
        +N+HNTP RLELRKFCP CYKHTIHGEIKK
Subjt:  ENKHNTPCRLELRKFCPRCYKHTIHGEIKK
A4QJM0 50S ribosomal protein L33, chloroplastic3.5e-1086.67Show/hide
Query:  ENKHNTPCRLELRKFCPRCYKHTIHGEIKK
        +N+HNTP RLELRKFCP CYKHTIHGEIKK
Subjt:  ENKHNTPCRLELRKFCPRCYKHTIHGEIKK
A6MM57 50S ribosomal protein L33, chloroplastic3.5e-1086.67Show/hide
Query:  ENKHNTPCRLELRKFCPRCYKHTIHGEIKK
        +N+HNTP RLELRKFCP CYKHTIHGEIKK
Subjt:  ENKHNTPCRLELRKFCPRCYKHTIHGEIKK
P56796 50S ribosomal protein L33, chloroplastic3.5e-1086.67Show/hide
Query:  ENKHNTPCRLELRKFCPRCYKHTIHGEIKK
        +N+HNTP RLELRKFCP CYKHTIHGEIKK
Subjt:  ENKHNTPCRLELRKFCPRCYKHTIHGEIKK
Q2QD68 50S ribosomal protein L33, chloroplastic5.4e-1190Show/hide
Query:  ENKHNTPCRLELRKFCPRCYKHTIHGEIKK
        +N+HNTP RLELRKFCPRCYKHTIHGEIKK
Subjt:  ENKHNTPCRLELRKFCPRCYKHTIHGEIKK
Arabidopsis top hitse value%identityAlignment
ATCG00640.1 ribosomal protein L332.5e-1186.67Show/hide
Query:  ENKHNTPCRLELRKFCPRCYKHTIHGEIKK
        +N+HNTP RLELRKFCP CYKHTIHGEIKK
Subjt:  ENKHNTPCRLELRKFCPRCYKHTIHGEIKK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GAGAATAAACACAATACGCCTTGTCGGTTGGAATTGAGAAAATTCTGCCCCCGTTGTTACAAACATACGATTCATGGAGAAATAAAGAAA
mRNA sequenceShow/hide mRNA sequence
GAGAATAAACACAATACGCCTTGTCGGTTGGAATTGAGAAAATTCTGCCCCCGTTGTTACAAACATACGATTCATGGAGAAATAAAGAAA
Protein sequenceShow/hide protein sequence
ENKHNTPCRLELRKFCPRCYKHTIHGEIKK