; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS023334 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS023334
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptioncyclin-C1-1-like
Genome locationscaffold378:99046..99150
RNA-Seq ExpressionMS023334
SyntenyMS023334
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0007049 - cell cycle (biological process)
GO:0050790 - regulation of catalytic activity (biological process)
GO:0051301 - cell division (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0016538 - cyclin-dependent protein serine/threonine kinase regulator activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147331.1 cyclin-C1-1 isoform X1 [Cucumis sativus]9.0e-0788.24Show/hide
Query:  VKNISIEILDFYENHRMITEERIVTALSKLPMKS
        VKNISIEILDFYENHR ITEERI++AL KLPMKS
Subjt:  VKNISIEILDFYENHRMITEERIVTALSKLPMKS
XP_022157727.1 cyclin-C1-1-like isoform X2 [Momordica charantia]1.6e-08100Show/hide
Query:  VKNISIEILDFYENHRMITEERIVTALSKLPMKS
        VKNISIEILDFYENHRMITEERIVTALSKLPMKS
Subjt:  VKNISIEILDFYENHRMITEERIVTALSKLPMKS
XP_031736854.1 cyclin-C1-1 isoform X3 [Cucumis sativus]9.0e-0788.24Show/hide
Query:  VKNISIEILDFYENHRMITEERIVTALSKLPMKS
        VKNISIEILDFYENHR ITEERI++AL KLPMKS
Subjt:  VKNISIEILDFYENHRMITEERIVTALSKLPMKS
XP_038901502.1 cyclin-C1-1-like isoform X1 [Benincasa hispida]1.5e-0685.29Show/hide
Query:  VKNISIEILDFYENHRMITEERIVTALSKLPMKS
        VKN SIEILDFYENHRMITE+RI++AL KLPMKS
Subjt:  VKNISIEILDFYENHRMITEERIVTALSKLPMKS
XP_038901504.1 cyclin-C1-1-like isoform X2 [Benincasa hispida]1.5e-0685.29Show/hide
Query:  VKNISIEILDFYENHRMITEERIVTALSKLPMKS
        VKN SIEILDFYENHRMITE+RI++AL KLPMKS
Subjt:  VKNISIEILDFYENHRMITEERIVTALSKLPMKS
TrEMBL top hitse value%identityAlignment
A0A0A0LN55 Uncharacterized protein8.8e-0888.57Show/hide
Query:  QVKNISIEILDFYENHRMITEERIVTALSKLPMKS
        QVKNISIEILDFYENHR ITEERI++AL KLPMKS
Subjt:  QVKNISIEILDFYENHRMITEERIVTALSKLPMKS
A0A1S3CDQ3 cyclin-C1-1-like9.7e-0785.29Show/hide
Query:  VKNISIEILDFYENHRMITEERIVTALSKLPMKS
        VKNISIEILDFYENHR ITEERI++AL KLP+KS
Subjt:  VKNISIEILDFYENHRMITEERIVTALSKLPMKS
A0A6J1DV87 cyclin-C1-1-like isoform X28.0e-09100Show/hide
Query:  VKNISIEILDFYENHRMITEERIVTALSKLPMKS
        VKNISIEILDFYENHRMITEERIVTALSKLPMKS
Subjt:  VKNISIEILDFYENHRMITEERIVTALSKLPMKS
A0A6J1I4M9 cyclin-C1-1-like isoform X12.8e-0687.88Show/hide
Query:  VKNISIEILDFYENHRMITEERIVTALSKLPMK
        VKNISIEILDFYENHRMITEERI++AL+KL MK
Subjt:  VKNISIEILDFYENHRMITEERIVTALSKLPMK
A0A6J1I6C7 cyclin-C1-2-like isoform X22.8e-0687.88Show/hide
Query:  VKNISIEILDFYENHRMITEERIVTALSKLPMK
        VKNISIEILDFYENHRMITEERI++AL+KL MK
Subjt:  VKNISIEILDFYENHRMITEERIVTALSKLPMK
SwissProt top hitse value%identityAlignment
Q9FJK6 Cyclin-C1-12.3e-0566.67Show/hide
Query:  VKNISIEILDFYENHRMITEERIVTALSKLPMK
        VKNI++EILDFYEN+R ITEE++ +A SKL +K
Subjt:  VKNISIEILDFYENHRMITEERIVTALSKLPMK
Q9FJK7 Cyclin-C1-23.0e-0570Show/hide
Query:  VKNISIEILDFYENHRMITEERIVTALSKL
        VKNI++EILDFYENHR+ TEER+  A +KL
Subjt:  VKNISIEILDFYENHRMITEERIVTALSKL
Arabidopsis top hitse value%identityAlignment
AT5G48630.1 Cyclin family protein2.1e-0670Show/hide
Query:  VKNISIEILDFYENHRMITEERIVTALSKL
        VKNI++EILDFYENHR+ TEER+  A +KL
Subjt:  VKNISIEILDFYENHRMITEERIVTALSKL
AT5G48630.2 Cyclin family protein2.1e-0670Show/hide
Query:  VKNISIEILDFYENHRMITEERIVTALSKL
        VKNI++EILDFYENHR+ TEER+  A +KL
Subjt:  VKNISIEILDFYENHRMITEERIVTALSKL
AT5G48640.1 Cyclin family protein1.6e-0666.67Show/hide
Query:  VKNISIEILDFYENHRMITEERIVTALSKLPMK
        VKNI++EILDFYEN+R ITEE++ +A SKL +K
Subjt:  VKNISIEILDFYENHRMITEERIVTALSKLPMK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CAGGTCAAAAACATCTCAATTGAGATATTGGATTTCTACGAAAACCACAGAATGATAACAGAGGAGAGAATTGTTACAGCTCTCAGCAAGCTACCTATGAAATCG
mRNA sequenceShow/hide mRNA sequence
CAGGTCAAAAACATCTCAATTGAGATATTGGATTTCTACGAAAACCACAGAATGATAACAGAGGAGAGAATTGTTACAGCTCTCAGCAAGCTACCTATGAAATCG
Protein sequenceShow/hide protein sequence
QVKNISIEILDFYENHRMITEERIVTALSKLPMKS