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MS023347 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS023347
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages;
Genome locationscaffold378:251458..251721
RNA-Seq ExpressionMS023347
SyntenyMS023347
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004148448.1 uncharacterized protein LOC101211284 [Cucumis sativus]3.7e-2577.01Show/hide
Query:  QKVAPWLSVPQFGDWEQKGGVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELIMASSTTPSTNNTSDNA--NHQFSP--QPSPTVR
        +KVAPW+SVPQFGDWEQKGGVPDYSVDFSKIRENRKQHKRDLSRASIGNEEEL MASS TP+TN    +   NHQ +P    SPT R
Subjt:  QKVAPWLSVPQFGDWEQKGGVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELIMASSTTPSTNNTSDNA--NHQFSP--QPSPTVR
XP_008457901.1 PREDICTED: uncharacterized protein LOC103497474 [Cucumis melo]3.5e-2374.71Show/hide
Query:  QKVAPWLSVPQFGDWEQKGGVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELIMASSTTPSTNNTSD--NANHQFSP--QPSPTVR
        +KVAPW+SVPQFGDWEQKG VPDYSVDFSKIRENRKQHKRDLSRASIGNEEEL MASS TP+TN      + N Q +P    SPT R
Subjt:  QKVAPWLSVPQFGDWEQKGGVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELIMASSTTPSTNNTSD--NANHQFSP--QPSPTVR
XP_022157718.1 uncharacterized protein LOC111024373 [Momordica charantia]1.1e-3797.59Show/hide
Query:  QKVAPWLSVPQFGDWEQKGGVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELIMASSTTPSTNNTSDNANHQFSPQPSPTVR
        +KVAPWLSVPQFGDWEQKGGVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELIMASSTTPSTNNTSDNANHQFSPQPSPT R
Subjt:  QKVAPWLSVPQFGDWEQKGGVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELIMASSTTPSTNNTSDNANHQFSPQPSPTVR
XP_022947047.1 uncharacterized protein LOC111451041 [Cucurbita moschata]7.8e-2377.78Show/hide
Query:  QKVAPWLSVPQFGDWEQKGGVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELIMASSTTPSTNNTSDNANH
        +KVAPWLSVPQFGDWEQK  VPDYSVDFSKIRENRKQHKRDLSRASIGNEE+L+ +S+TT +T  T+ +A+H
Subjt:  QKVAPWLSVPQFGDWEQKGGVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELIMASSTTPSTNNTSDNANH
XP_038900911.1 uncharacterized protein LOC120087959 [Benincasa hispida]3.1e-2475.86Show/hide
Query:  QKVAPWLSVPQFGDWEQKGGVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELIMASSTTPSTNNTSDNA--NHQFSP--QPSPTVR
        +KVAPW+SVPQFGDWEQKG VPDYSVDFSKIRENRKQHKRDLSRASIGNEEEL M SS TP+TN    +A  NHQ +P    SPT R
Subjt:  QKVAPWLSVPQFGDWEQKGGVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELIMASSTTPSTNNTSDNA--NHQFSP--QPSPTVR
TrEMBL top hitse value%identityAlignment
A0A0A0LJN9 Uncharacterized protein1.8e-2577.01Show/hide
Query:  QKVAPWLSVPQFGDWEQKGGVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELIMASSTTPSTNNTSDNA--NHQFSP--QPSPTVR
        +KVAPW+SVPQFGDWEQKGGVPDYSVDFSKIRENRKQHKRDLSRASIGNEEEL MASS TP+TN    +   NHQ +P    SPT R
Subjt:  QKVAPWLSVPQFGDWEQKGGVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELIMASSTTPSTNNTSDNA--NHQFSP--QPSPTVR
A0A1S3C6Q7 uncharacterized protein LOC1034974741.7e-2374.71Show/hide
Query:  QKVAPWLSVPQFGDWEQKGGVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELIMASSTTPSTNNTSD--NANHQFSP--QPSPTVR
        +KVAPW+SVPQFGDWEQKG VPDYSVDFSKIRENRKQHKRDLSRASIGNEEEL MASS TP+TN      + N Q +P    SPT R
Subjt:  QKVAPWLSVPQFGDWEQKGGVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELIMASSTTPSTNNTSD--NANHQFSP--QPSPTVR
A0A6J1DU25 uncharacterized protein LOC1110243735.4e-3897.59Show/hide
Query:  QKVAPWLSVPQFGDWEQKGGVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELIMASSTTPSTNNTSDNANHQFSPQPSPTVR
        +KVAPWLSVPQFGDWEQKGGVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELIMASSTTPSTNNTSDNANHQFSPQPSPT R
Subjt:  QKVAPWLSVPQFGDWEQKGGVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELIMASSTTPSTNNTSDNANHQFSPQPSPTVR
A0A6J1G5D0 uncharacterized protein LOC1114510413.8e-2377.78Show/hide
Query:  QKVAPWLSVPQFGDWEQKGGVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELIMASSTTPSTNNTSDNANH
        +KVAPWLSVPQFGDWEQK  VPDYSVDFSKIRENRKQHKRDLSRASIGNEE+L+ +S+TT +T  T+ +A+H
Subjt:  QKVAPWLSVPQFGDWEQKGGVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELIMASSTTPSTNNTSDNANH
A0A6J1L3A7 uncharacterized protein LOC1114995151.9e-2280.56Show/hide
Query:  QKVAPWLSVPQFGDWEQKGGVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELIMASSTTPSTNNTSDNANH
        +KVAPWLSVPQFGDWEQK  VPDYSVDFSKIRENRKQHKRDLSRASIGNEE+L MASS T +T  T+ N +H
Subjt:  QKVAPWLSVPQFGDWEQKGGVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELIMASSTTPSTNNTSDNANH
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G09960.1 FUNCTIONS IN: molecular_function unknown1.9e-1960.64Show/hide
Query:  QKVAPWLSVPQFGDWEQKGG--VPDYSVDFSKIRENRKQHKRDLSRASIGNEEELI----MASSTTPSTNNTSDNANHQFSP----QP-SPTVR
        +K  PWLSVPQFGDW+QKGG  +PDYS+DF+KIRE RKQ+KRD SRAS+GNEEELI     A+ST   T   S+N   +FSP    QP SP+ R
Subjt:  QKVAPWLSVPQFGDWEQKGG--VPDYSVDFSKIRENRKQHKRDLSRASIGNEEELI----MASSTTPSTNNTSDNANHQFSP----QP-SPTVR
AT5G19473.1 RPM1-interacting protein 4 (RIN4) family protein2.3e-0950.91Show/hide
Query:  APWLSVPQFGDWEQKG--GVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELIMA
        A W  VPQFG W+QKG     +YSV FSK R NRKQ+K  +  +S+G+E+EL+++
Subjt:  APWLSVPQFGDWEQKG--GVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELIMA
AT5G64850.1 FUNCTIONS IN: molecular_function unknown1.4e-1753.26Show/hide
Query:  KVAPWLSVPQFGDWEQKGGVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELI--------------MASSTTPSTNNTSDNANHQFSPQPS
        K +PWLSVPQFGDW+QKGG  DYS+DFSKIRE RK +KRD SRAS+GNEEELI                 +T  S NN  +  +H     PS
Subjt:  KVAPWLSVPQFGDWEQKGGVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELI--------------MASSTTPSTNNTSDNANHQFSPQPS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTTGGAACGACAATGCAGAAAGTGGCTCCGTGGCTGAGCGTTCCACAGTTTGGGGATTGGGAGCAGAAGGGAGGGGTTCCAGACTATTCAGTGGATTTCTCAAAAATAAG
GGAAAACAGAAAGCAGCACAAGAGGGATTTGTCGAGGGCAAGCATTGGGAATGAAGAGGAGCTGATCATGGCTTCATCAACCACTCCCTCAACAAACAACACATCCGATA
ATGCAAACCACCAATTCTCGCCCCAACCTTCTCCAACGGTAAGA
mRNA sequenceShow/hide mRNA sequence
GTTGGAACGACAATGCAGAAAGTGGCTCCGTGGCTGAGCGTTCCACAGTTTGGGGATTGGGAGCAGAAGGGAGGGGTTCCAGACTATTCAGTGGATTTCTCAAAAATAAG
GGAAAACAGAAAGCAGCACAAGAGGGATTTGTCGAGGGCAAGCATTGGGAATGAAGAGGAGCTGATCATGGCTTCATCAACCACTCCCTCAACAAACAACACATCCGATA
ATGCAAACCACCAATTCTCGCCCCAACCTTCTCCAACGGTAAGA
Protein sequenceShow/hide protein sequence
VGTTMQKVAPWLSVPQFGDWEQKGGVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELIMASSTTPSTNNTSDNANHQFSPQPSPTVR