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MS023353 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS023353
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionDUF21 domain-containing protein
Genome locationscaffold378:286809..286969
RNA-Seq ExpressionMS023353
SyntenyMS023353
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK07901.1 DUF21 domain-containing protein [Cucumis melo var. makuwa]1.6e-0755.77Show/hide
Query:  WSLAYRRLNTREVLKKKCRSWTISPSMCCL-FKSSESLDHLFVRCSFAAQAW
        WSLAYR LNT + ++K  +   +SPSMCCL FK  E+LDHLF+ C+F  +AW
Subjt:  WSLAYRRLNTREVLKKKCRSWTISPSMCCL-FKSSESLDHLFVRCSFAAQAW
TYK31299.1 protein FAM91A1 [Cucumis melo var. makuwa]2.2e-0448.08Show/hide
Query:  WSLAYRRLNTREVLKKKCRSWTISPSMCCL-FKSSESLDHLFVRCSFAAQAW
        WSLAYR LN +  L++K  + ++SPS+C L  K +E+ DHLF+ C FA + W
Subjt:  WSLAYRRLNTREVLKKKCRSWTISPSMCCL-FKSSESLDHLFVRCSFAAQAW
TrEMBL top hitse value%identityAlignment
A0A5D3C7R2 DUF21 domain-containing protein7.8e-0855.77Show/hide
Query:  WSLAYRRLNTREVLKKKCRSWTISPSMCCL-FKSSESLDHLFVRCSFAAQAW
        WSLAYR LNT + ++K  +   +SPSMCCL FK  E+LDHLF+ C+F  +AW
Subjt:  WSLAYRRLNTREVLKKKCRSWTISPSMCCL-FKSSESLDHLFVRCSFAAQAW
A0A5D3E632 Protein FAM91A11.1e-0448.08Show/hide
Query:  WSLAYRRLNTREVLKKKCRSWTISPSMCCL-FKSSESLDHLFVRCSFAAQAW
        WSLAYR LN +  L++K  + ++SPS+C L  K +E+ DHLF+ C FA + W
Subjt:  WSLAYRRLNTREVLKKKCRSWTISPSMCCL-FKSSESLDHLFVRCSFAAQAW
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TGGTCTTTGGCATATAGACGTTTAAATACTCGTGAGGTTCTCAAGAAGAAGTGCAGAAGCTGGACTATTTCCCCTTCGATGTGTTGTTTGTTCAAAAGTAGTGAATCCTT
AGACCACTTATTCGTCCGTTGCTCTTTTGCGGCCCAAGCATGGTTCTTT
mRNA sequenceShow/hide mRNA sequence
TGGTCTTTGGCATATAGACGTTTAAATACTCGTGAGGTTCTCAAGAAGAAGTGCAGAAGCTGGACTATTTCCCCTTCGATGTGTTGTTTGTTCAAAAGTAGTGAATCCTT
AGACCACTTATTCGTCCGTTGCTCTTTTGCGGCCCAAGCATGGTTCTTT
Protein sequenceShow/hide protein sequence
WSLAYRRLNTREVLKKKCRSWTISPSMCCLFKSSESLDHLFVRCSFAAQAWFF