CuGenDBv2

Gene ID	MS023361
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	protein UXT homolog
Genome location	scaffold378:359696..362206
RNA-Seq Expression	MS023361
Synteny	MS023361
Gene Ontology terms	GO:0000122 - negative regulation of transcription by RNA polymerase II (biological process) GO:0045944 - positive regulation of transcription by RNA polymerase II (biological process) GO:0000785 - chromatin (cellular component) GO:0016592 - mediator complex (cellular component) GO:0003714 - transcription corepressor activity (molecular function)
InterPro domains	IPR004127 - Prefoldin alpha-like IPR009053 - Prefoldin

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004141760.1 protein UXT homolog [Cucumis sativus]

9.4e-53

93.91

Show/hide

Query:  MNVGTDNFRHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRKNIENLEKNSITNLRTLVNLGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWS
        M+V TDNFRHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLR+NIENLEKNSITN+RTLVNLGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWS
Subjt:  MNVGTDNFRHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRKNIENLEKNSITNLRTLVNLGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWS

Query:  EALNFISLREERLAR
        EAL FISL+EERL R
Subjt:  EALNFISLREERLAR

XP_008462175.1 PREDICTED: protein UXT homolog [Cucumis melo]

9.4e-53

93.91

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Query:  MNVGTDNFRHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRKNIENLEKNSITNLRTLVNLGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWS
        M+VGTD+FR+EKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLR+NIENLEKNSITNLRTLVNLGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWS
Subjt:  MNVGTDNFRHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRKNIENLEKNSITNLRTLVNLGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWS

Query:  EALNFISLREERLAR
        EAL FISL+EERL R
Subjt:  EALNFISLREERLAR

XP_022159095.1 protein UXT homolog [Momordica charantia]

1.4e-56

100

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Query:  MNVGTDNFRHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRKNIENLEKNSITNLRTLVNLGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWS
        MNVGTDNFRHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRKNIENLEKNSITNLRTLVNLGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWS
Subjt:  MNVGTDNFRHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRKNIENLEKNSITNLRTLVNLGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWS

Query:  EALNFISLREERLAR
        EALNFISLREERLAR
Subjt:  EALNFISLREERLAR

XP_022954004.1 protein UXT homolog [Cucurbita moschata]

3.3e-50

90.43

Show/hide

Query:  MNVGTDNFRHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRKNIENLEKNSITNLRTLVNLGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWS
        M+VG DNFR+EKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLR+NIENLEKNSITNL TLVNLGSEVYVQG+V DTR IFVD+GLGFHVEFTWS
Subjt:  MNVGTDNFRHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRKNIENLEKNSITNLRTLVNLGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWS

Query:  EALNFISLREERLAR
        EAL FISL+EERLAR
Subjt:  EALNFISLREERLAR

XP_038897562.1 protein UXT homolog [Benincasa hispida]

2.6e-50

89.57

Show/hide

Query:  MNVGTDNFRHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRKNIENLEKNSITNLRTLVNLGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWS
        M+ G DNFR+EKV+RFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLR+NIENLEKNSITNLR LVNLGSEVY QGDVPDTRSIFVD+GLGFHVEFTWS
Subjt:  MNVGTDNFRHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRKNIENLEKNSITNLRTLVNLGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWS

Query:  EALNFISLREERLAR
        EAL F+SL+EERLAR
Subjt:  EALNFISLREERLAR

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K7F1 Uncharacterized protein

4.5e-53

93.91

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Query:  MNVGTDNFRHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRKNIENLEKNSITNLRTLVNLGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWS
        M+V TDNFRHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLR+NIENLEKNSITN+RTLVNLGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWS
Subjt:  MNVGTDNFRHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRKNIENLEKNSITNLRTLVNLGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWS

Query:  EALNFISLREERLAR
        EAL FISL+EERL R
Subjt:  EALNFISLREERLAR

A0A1S3CHV4 protein UXT homolog

4.5e-53

93.91

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Query:  MNVGTDNFRHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRKNIENLEKNSITNLRTLVNLGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWS
        M+VGTD+FR+EKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLR+NIENLEKNSITNLRTLVNLGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWS
Subjt:  MNVGTDNFRHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRKNIENLEKNSITNLRTLVNLGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWS

Query:  EALNFISLREERLAR
        EAL FISL+EERL R
Subjt:  EALNFISLREERLAR

A0A5D3BXW7 Protein UXT-like protein

4.5e-53

93.91

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Query:  MNVGTDNFRHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRKNIENLEKNSITNLRTLVNLGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWS
        M+VGTD+FR+EKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLR+NIENLEKNSITNLRTLVNLGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWS
Subjt:  MNVGTDNFRHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRKNIENLEKNSITNLRTLVNLGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWS

Query:  EALNFISLREERLAR
        EAL FISL+EERL R
Subjt:  EALNFISLREERLAR

A0A6J1E2W3 protein UXT homolog

6.8e-57

100

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Query:  MNVGTDNFRHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRKNIENLEKNSITNLRTLVNLGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWS
        MNVGTDNFRHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRKNIENLEKNSITNLRTLVNLGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWS
Subjt:  MNVGTDNFRHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRKNIENLEKNSITNLRTLVNLGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWS

Query:  EALNFISLREERLAR
        EALNFISLREERLAR
Subjt:  EALNFISLREERLAR

A0A6J1GRK9 protein UXT homolog

1.6e-50

90.43

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Query:  MNVGTDNFRHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRKNIENLEKNSITNLRTLVNLGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWS
        M+VG DNFR+EKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLR+NIENLEKNSITNL TLVNLGSEVYVQG+V DTR IFVD+GLGFHVEFTWS
Subjt:  MNVGTDNFRHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRKNIENLEKNSITNLRTLVNLGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWS

Query:  EALNFISLREERLAR
        EAL FISL+EERLAR
Subjt:  EALNFISLREERLAR

SwissProt top hits

e value

%identity

Alignment

A7T0W1 Protein UXT homolog

1.1e-14

40.57

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Query:  EKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRKNIENLEKNSI--TNLRTLVNLGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWSEALNFISL
        EK++++EEF+D+RL  DL      +D++  +   ++ L+ +IE ++K  +   +LR+ V+LG   + Q  VPD   IF+ +G GF VEFT SEALNFI  
Subjt:  EKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRKNIENLEKNSI--TNLRTLVNLGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWSEALNFISL

Query:  REERLA
         E++LA
Subjt:  REERLA

Q32P97 Protein UXT

2.2e-12

40.78

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Query:  EKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRKNIENLEKNSITNLRTLVNLGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWSEALNFISLRE
        EKV R+E F+   L+ DL   +  RDKV+EQ   +  LR  IE L++ + + L   V+LG   +V   VPDT  I+V +G GF +E T +EAL FI  + 
Subjt:  EKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRKNIENLEKNSITNLRTLVNLGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWSEALNFISLRE

Query:  ERL
          L
Subjt:  ERL

Q54ND3 Protein UXT homolog

3.9e-17

42.16

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Query:  RHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRKNIENLEKNSITNLRTLVNLGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWSEALNFISL
        R + ++ +E F++  L  DL  +I +R+KV E  + + +L+ NIE L +N + +++T++NLGSE YV+  V DT  I+VDIGLG HV++T  EA+ FI+ 
Subjt:  RHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRKNIENLEKNSITNLRTLVNLGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWSEALNFISL

Query:  RE
        +E
Subjt:  RE

Q63ZY7 Protein UXT

2.0e-13

41.75

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Query:  EKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRKNIENLEKNSITNLRTLVNLGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWSEALNFISLRE
        EKV R+E F+   L+ DL   +  RDKV+EQ  V+  LR  IE L++ + + L   V+LG   +V   VPDT  I+V +G GF +E T +EAL FI  + 
Subjt:  EKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRKNIENLEKNSITNLRTLVNLGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWSEALNFISLRE

Query:  ERL
          L
Subjt:  ERL

Q9WTZ0 Protein UXT

2.0e-13

41.75

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Query:  EKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRKNIENLEKNSITNLRTLVNLGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWSEALNFISLRE
        EKV R+E F+   L+ DL   +  RDKV+EQ  V+  LR  IE L++ + + L   V+LG   +V   VPDT  I+V +G GF +E T +EAL FI  + 
Subjt:  EKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRKNIENLEKNSITNLRTLVNLGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWSEALNFISLRE

Query:  ERL
          L
Subjt:  ERL

Arabidopsis top hits

e value

%identity

Alignment

AT1G26660.1 Prefoldin chaperone subunit family protein

2.6e-32

62.5

Show/hide

Query:  RHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRKNIENLEKNSITNLRTLVNLGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWSEALNFISL
        R + +Q  EE +D+ LK  LVHA A RDK+FE+QK  SDLRKN+E LEKN + +L+T VNLGSEVY+Q +VPDTR IF+D+GLGF+VEFT  EAL++I+ 
Subjt:  RHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRKNIENLEKNSITNLRTLVNLGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWSEALNFISL

Query:  REER
        REER
Subjt:  REER

AT1G26660.2 Prefoldin chaperone subunit family protein

1.2e-21

51.89

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Query:  FRHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVF-SDLRKNIENLEKNSITNLRTLVNLGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWSEALNFI
        FR   V  F  F   R   +  H I     ++ +   F SDLRKN+E LEKN + +L+T VNLGSEVY+Q +VPDTR IF+D+GLGF+VEFT  EAL++I
Subjt:  FRHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVF-SDLRKNIENLEKNSITNLRTLVNLGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWSEALNFI

Query:  SLREER
        + REER
Subjt:  SLREER

Sequences

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CDS sequence

Show/hide CDS sequence

ATGAATGTAGGAACTGATAACTTTCGCCATGAGAAAGTTCAAAGATTTGAGGAATTTGTTGACCGTCGCTTGAAACCCGACCTGGTTCATGCAATTGCTGAAAGGGACAA
AGTGTTTGAGCAGCAGAAGGTGTTTTCAGATCTTCGAAAAAACATCGAAAATCTGGAGAAAAACAGTATAACTAACCTCAGAACGTTGGTCAATCTTGGCTCTGAAGTCT
ATGTGCAAGGCGATGTGCCAGATACACGAAGCATATTTGTAGATATTGGGCTTGGGTTTCATGTGGAGTTCACATGGTCTGAAGCTTTAAATTTCATTTCTCTTAGAGAA
GAAAGATTAGCCAGG

mRNA sequence

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Protein sequence

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MNVGTDNFRHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRKNIENLEKNSITNLRTLVNLGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWSEALNFISLRE
ERLAR

MS023361 (gene) of Bitter gourd (TR) v1 genome