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MS023365 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS023365
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Description30S ribosomal protein S12, chloroplastic
Genome locationscaffold378:423206..423379
RNA-Seq ExpressionMS023365
SyntenyMS023365
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0015935 - small ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF1876942.1 hypothetical protein Lal_00033867 [Lupinus albus]2.1e-1684.21Show/hide
Query:  NENVTELVPVTLRDGMEEGRRFSNEEKDPMTSKELNEEPYEVKISCTVLSSGSKGDL
        +ENVT+LV VTLRDG+EEG RFSNEEKDPMTSKELN+E YEVKISC+VL SGSKGDL
Subjt:  NENVTELVPVTLRDGMEEGRRFSNEEKDPMTSKELNEEPYEVKISCTVLSSGSKGDL

XP_022932068.1 uncharacterized protein LOC111438394 [Cucurbita moschata]3.9e-23100Show/hide
Query:  MNENVTELVPVTLRDGMEEGRRFSNEEKDPMTSKELNEEPYEVKISCTVLSSGSKGDL
        MNENVTELVPVTLRDGMEEGRRFSNEEKDPMTSKELNEEPYEVKISCTVLSSGSKGDL
Subjt:  MNENVTELVPVTLRDGMEEGRRFSNEEKDPMTSKELNEEPYEVKISCTVLSSGSKGDL

XP_024929966.1 uncharacterized protein LOC112488761 [Ziziphus jujuba]3.5e-1679.31Show/hide
Query:  MNENVTELVPVTLRDGMEEGRRFSNEEKDPMTSKELNEEPYEVKISCTVLSSGSKGDL
        MNENVTELV VTL++G+EEG+RFSNEE D MTSKELNEEPYE+KISC VL +G KGDL
Subjt:  MNENVTELVPVTLRDGMEEGRRFSNEEKDPMTSKELNEEPYEVKISCTVLSSGSKGDL

XP_038896566.1 30S ribosomal protein S12, chloroplastic-like [Benincasa hispida]2.8e-2196.55Show/hide
Query:  MNENVTELVPVTLRDGMEEGRRFSNEEKDPMTSKELNEEPYEVKISCTVLSSGSKGDL
        MNENVT+LVPVTLRDGMEEGRRFSNEEKDPMTSKELNEEPYEVKIS TVLSSGSKGDL
Subjt:  MNENVTELVPVTLRDGMEEGRRFSNEEKDPMTSKELNEEPYEVKISCTVLSSGSKGDL

XP_038902483.1 30S ribosomal protein S12, chloroplastic-like [Benincasa hispida]1.4e-2096.55Show/hide
Query:  MNENVTELVPVTLRDGMEEGRRFSNEEKDPMTSKELNEEPYEVKISCTVLSSGSKGDL
        MNENVTELV VTLRDGMEEGRRFSNEEKDPMTSKELNEEPYEVKIS TVLSSGSKGDL
Subjt:  MNENVTELVPVTLRDGMEEGRRFSNEEKDPMTSKELNEEPYEVKISCTVLSSGSKGDL

TrEMBL top hitse value%identityAlignment
A0A6A5N1Q8 Uncharacterized protein1.0e-1684.21Show/hide
Query:  NENVTELVPVTLRDGMEEGRRFSNEEKDPMTSKELNEEPYEVKISCTVLSSGSKGDL
        +ENVT+LV VTLRDG+EEG RFSNEEKDPMTSKELN+E YEVKISC+VL SGSKGDL
Subjt:  NENVTELVPVTLRDGMEEGRRFSNEEKDPMTSKELNEEPYEVKISCTVLSSGSKGDL

A0A6J1F0L1 uncharacterized protein LOC1114383941.9e-23100Show/hide
Query:  MNENVTELVPVTLRDGMEEGRRFSNEEKDPMTSKELNEEPYEVKISCTVLSSGSKGDL
        MNENVTELVPVTLRDGMEEGRRFSNEEKDPMTSKELNEEPYEVKISCTVLSSGSKGDL
Subjt:  MNENVTELVPVTLRDGMEEGRRFSNEEKDPMTSKELNEEPYEVKISCTVLSSGSKGDL

A0A6P3YU62 uncharacterized protein LOC1074047801.7e-1679.31Show/hide
Query:  MNENVTELVPVTLRDGMEEGRRFSNEEKDPMTSKELNEEPYEVKISCTVLSSGSKGDL
        MNENVTELV VTL++G+EEG+RFSNEE D MTSKELNEEPYE+KISC VL +G KGDL
Subjt:  MNENVTELVPVTLRDGMEEGRRFSNEEKDPMTSKELNEEPYEVKISCTVLSSGSKGDL

A0A6P6G7D1 uncharacterized protein LOC1124887611.7e-1679.31Show/hide
Query:  MNENVTELVPVTLRDGMEEGRRFSNEEKDPMTSKELNEEPYEVKISCTVLSSGSKGDL
        MNENVTELV VTL++G+EEG+RFSNEE D MTSKELNEEPYE+KISC VL +G KGDL
Subjt:  MNENVTELVPVTLRDGMEEGRRFSNEEKDPMTSKELNEEPYEVKISCTVLSSGSKGDL

A0A6P6GKJ1 uncharacterized protein LOC1124887681.7e-1679.31Show/hide
Query:  MNENVTELVPVTLRDGMEEGRRFSNEEKDPMTSKELNEEPYEVKISCTVLSSGSKGDL
        MNENVTELV VTL++G+EEG+RFSNEE D MTSKELNEEPYE+KISC VL +G KGDL
Subjt:  MNENVTELVPVTLRDGMEEGRRFSNEEKDPMTSKELNEEPYEVKISCTVLSSGSKGDL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGAAAACGTGACTGAATTGGTCCCGGTCACTCTTCGGGACGGAATGGAAGAAGGGAGGAGATTCTCGAACGAGGAAAAGGATCCAATGACTTCGAAAGAATTGAA
CGAGGAGCCGTATGAGGTGAAAATCTCATGTACGGTTCTGTCGAGTGGCAGTAAGGGTGACTTA
mRNA sequenceShow/hide mRNA sequence
ATGAATGAAAACGTGACTGAATTGGTCCCGGTCACTCTTCGGGACGGAATGGAAGAAGGGAGGAGATTCTCGAACGAGGAAAAGGATCCAATGACTTCGAAAGAATTGAA
CGAGGAGCCGTATGAGGTGAAAATCTCATGTACGGTTCTGTCGAGTGGCAGTAAGGGTGACTTA
Protein sequenceShow/hide protein sequence
MNENVTELVPVTLRDGMEEGRRFSNEEKDPMTSKELNEEPYEVKISCTVLSSGSKGDL