; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS023367 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS023367
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRegulator of rDNA transcription protein 15
Genome locationscaffold378:450901..451156
RNA-Seq ExpressionMS023367
SyntenyMS023367
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF1856207.1 hypothetical protein Lal_00046809 [Lupinus albus]1.9e-2390.77Show/hide
Query:  MEQCRQGKSAKWIRNLGKRIGSEGWA-GPSPEPVGCRWTARAASAARAGRRVPAGGRTGNGSFGS
        MEQCRQGKSAKWIRNLGKRIGSEGWA GPSPEPVGCRWTARAA AARAGRRVP GGR GNG FG+
Subjt:  MEQCRQGKSAKWIRNLGKRIGSEGWA-GPSPEPVGCRWTARAASAARAGRRVPAGGRTGNGSFGS

KAF3320278.1 hypothetical protein FCM35_KLT22090 [Carex littledalei]6.1e-2577.65Show/hide
Query:  MEQCRQGKSAKWIRNLGKRIG-SEGWAGPSPEPVGCRWTARAASAARAGRRVPAGGRTGNGSFGSLPRASNSQLRTGTDKGNPTV
        MEQCRQGKSAK IRN GK +    G  GP PEPVGCR TARAA AARAGRRVPAGGR GNG  G LPRA+NS+LRTGTDKGNPTV
Subjt:  MEQCRQGKSAKWIRNLGKRIG-SEGWAGPSPEPVGCRWTARAASAARAGRRVPAGGRTGNGSFGSLPRASNSQLRTGTDKGNPTV

KAF3327859.1 hypothetical protein FCM35_KLT06465 [Carex littledalei]2.7e-2578.82Show/hide
Query:  MEQCRQGKSAKWIRNLGKRIG-SEGWAGPSPEPVGCRWTARAASAARAGRRVPAGGRTGNGSFGSLPRASNSQLRTGTDKGNPTV
        MEQCRQGKSAK IRN GK +    G  GP PEPVGCR TARAASAARAGRRVPAGGR GNG  G LPRA+NS+LRTGTDKGNPTV
Subjt:  MEQCRQGKSAKWIRNLGKRIG-SEGWAGPSPEPVGCRWTARAASAARAGRRVPAGGRTGNGSFGSLPRASNSQLRTGTDKGNPTV

KAF3339541.1 hypothetical protein FCM35_KLT15312 [Carex littledalei]4.3e-2374.16Show/hide
Query:  MEQCRQGKSAKWIRNLGKRIGSEGWA-GPSPE----PVGCRWTARAASAARAGRRVPAGGRTGNGSFGSLPRASNSQLRTGTDKGNPTV
        MEQC QGKSAKWIRN GKRIGSEGWA G  P     P   R TARAA AARAGRRVPAGGR  NG    LPRA+NS+LRTGTDKGNPTV
Subjt:  MEQCRQGKSAKWIRNLGKRIGSEGWA-GPSPE----PVGCRWTARAASAARAGRRVPAGGRTGNGSFGSLPRASNSQLRTGTDKGNPTV

KAF7801192.1 hypothetical protein G2W53_044871 [Senna tora]1.1e-2393.75Show/hide
Query:  MEQCRQGKSAKWIRNLGKRIGSEGWA-GPSPEPVGCRWTARAASAARAGRRVPAGGRTGNGSFG
        MEQCRQGKSAKWIRNLGKRIGSEGWA G SPEPVGCRWTARAA AARAGRRVPAGGRTGNG FG
Subjt:  MEQCRQGKSAKWIRNLGKRIGSEGWA-GPSPEPVGCRWTARAASAARAGRRVPAGGRTGNGSFG

TrEMBL top hitse value%identityAlignment
A0A0J8DWB8 Uncharacterized protein1.0e-2276.19Show/hide
Query:  MEQCRQGKSAKWIRNLGKRIGSEGWAGPSPEPVGCRWTARAASAARAGRRVPAGGRTGNGSFGSLPRASNSQLRTGTDKGNPTV
        MEQCRQGKS K    L  R G     GPSPEPVGCRWTARAA AARAGRR+PAG R+GNGSF  LPRASNSQLRT TDKGNPTV
Subjt:  MEQCRQGKSAKWIRNLGKRIGSEGWAGPSPEPVGCRWTARAASAARAGRRVPAGGRTGNGSFGSLPRASNSQLRTGTDKGNPTV

A0A0P1A454 Atp synthase subunit beta5.7e-2190.16Show/hide
Query:  GWAGPSPEPVGCRWTARAASAARAGRRVPAGGRTGNGSFGSLPRASNSQLRTGTDKGNPTV
        G  GP PEPVGCRWTARAASAARAG RVPAGGRTGNG FG LPRASNSQLRTGTDKGNPTV
Subjt:  GWAGPSPEPVGCRWTARAASAARAGRRVPAGGRTGNGSFGSLPRASNSQLRTGTDKGNPTV

A0A3Q7IVA7 Uncharacterized protein3.4e-2171.43Show/hide
Query:  MEQCRQGKSAKWIRNLGKRIGSEGWAGPSPEPVGCRWTARAASAARAGRRVPAGGRTGNGSFGSLPRASNSQLRTGTDKGNPTV
        MEQCR+GKSAKWIRN GKRI SEGWA  S      RWT RAA A +AG RVP  GRT NGSFG LPR SNSQLRTGT+KGN T+
Subjt:  MEQCRQGKSAKWIRNLGKRIGSEGWAGPSPEPVGCRWTARAASAARAGRRVPAGGRTGNGSFGSLPRASNSQLRTGTDKGNPTV

A0A6A5L3R0 Uncharacterized protein9.4e-2490.77Show/hide
Query:  MEQCRQGKSAKWIRNLGKRIGSEGWA-GPSPEPVGCRWTARAASAARAGRRVPAGGRTGNGSFGS
        MEQCRQGKSAKWIRNLGKRIGSEGWA GPSPEPVGCRWTARAA AARAGRRVP GGR GNG FG+
Subjt:  MEQCRQGKSAKWIRNLGKRIGSEGWA-GPSPEPVGCRWTARAASAARAGRRVPAGGRTGNGSFGS

A0A6D2I5H0 Uncharacterized protein6.1e-2379.01Show/hide
Query:  RQGKSAKWIRNLGKRIG-SEGWAGPSPEPVGCRWTARAASAARAGRRVPAGGRTGNGSFGSLPRASNSQLRTGTDKGNPTV
        RQGKSAKWIRN GK +    G  GPS EPVGC  TARAASAARA R VPAGGRTGN SFG  PRASNSQLRTGTDKGNPTV
Subjt:  RQGKSAKWIRNLGKRIG-SEGWAGPSPEPVGCRWTARAASAARAGRRVPAGGRTGNGSFGSLPRASNSQLRTGTDKGNPTV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAACAATGTAGGCAAGGGAAGTCGGCAAAATGGATCCGTAACCTCGGGAAAAGGATTGGCTCTGAGGGCTGGGCAGGTCCCAGTCCCGAACCCGTCGGCTGTCGGTG
GACTGCTCGAGCTGCTTCCGCGGCGAGAGCGGGTCGCCGCGTGCCGGCCGGGGGACGGACTGGGAACGGCTCCTTCGGGAGCCTTCCCCGGGCGTCGAACAGTCAACTCA
GAACTGGTACGGACAAGGGGAATCCGACTGTT
mRNA sequenceShow/hide mRNA sequence
ATGGAACAATGTAGGCAAGGGAAGTCGGCAAAATGGATCCGTAACCTCGGGAAAAGGATTGGCTCTGAGGGCTGGGCAGGTCCCAGTCCCGAACCCGTCGGCTGTCGGTG
GACTGCTCGAGCTGCTTCCGCGGCGAGAGCGGGTCGCCGCGTGCCGGCCGGGGGACGGACTGGGAACGGCTCCTTCGGGAGCCTTCCCCGGGCGTCGAACAGTCAACTCA
GAACTGGTACGGACAAGGGGAATCCGACTGTT
Protein sequenceShow/hide protein sequence
MEQCRQGKSAKWIRNLGKRIGSEGWAGPSPEPVGCRWTARAASAARAGRRVPAGGRTGNGSFGSLPRASNSQLRTGTDKGNPTV