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MS023377 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS023377
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionGPI-anchor transamidase isoform X1
Genome locationscaffold378:599743..600174
RNA-Seq ExpressionMS023377
SyntenyMS023377
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0043170 - macromolecule metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0043231 - intracellular membrane-bounded organelle (cellular component)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN63585.1 hypothetical protein VITISV_026806 [Vitis vinifera]4.5e-0424.09Show/hide
Query:  PKLVLNPNACPSCLTESNDIHHVCFNCSSSEHILRAPFQ-SDCSWICNLRAKDNTFAFLCSHGSRRKARTL-QPNLVKSSISNWFERNKKIFYNKCAPWG
        P   L+PN C  C+     + H+  +CS ++ +    FQ +   W+      D  F      GS ++   L Q   +      W ERN +IF +K    G
Subjt:  PKLVLNPNACPSCLTESNDIHHVCFNCSSSEHILRAPFQ-SDCSWICNLRAKDNTFAFLCSHGSRRKARTL-QPNLVKSSISNWFERNKKIFYNKCAPWG

Query:  ESFEMIKVHIASWCIPNKLFQNNSITEINSNWEVFCK
          ++ I+   + W   +K+F+   +  +  +W   CK
Subjt:  ESFEMIKVHIASWCIPNKLFQNNSITEINSNWEVFCK

KAA0062564.1 GPI-anchor transamidase isoform X1 [Cucumis melo var. makuwa]5.7e-0732.09Show/hide
Query:  LNPNACPSCLTESNDIHHVCFNCSSS----EHILRAPFQSDCSWICNLRAKDNTFAFLCSHGSRRKARTLQPNLVKSSISN-WFERNKKIFYNKCAPWGE
        L P+AC  CL E  D+  + F C  S    E++L + F  D  W  +     N    L     +   R +  N+ K+ +S+ WFE N++IF  K   W E
Subjt:  LNPNACPSCLTESNDIHHVCFNCSSS----EHILRAPFQSDCSWICNLRAKDNTFAFLCSHGSRRKARTLQPNLVKSSISN-WFERNKKIFYNKCAPWGE

Query:  SFEMIKVHIASWCIPNKLFQNNSITEINSNWEVF
          ++ K + A+WC+ NK F + SI +++ NW  F
Subjt:  SFEMIKVHIASWCIPNKLFQNNSITEINSNWEVF

KAA0068194.1 mediator of RNA polymerase II transcription subunit 8 isoform X1 [Cucumis melo var. makuwa]4.5e-0444.9Show/hide
Query:  NWFERNKKIFYNKCAPWGESFEMIKVHIASWCIPNKLFQNNSITEINSN
        NWFERN++IF NK +PW    E+ +++ +SWC  +K F+  SI +I+ N
Subjt:  NWFERNKKIFYNKCAPWGESFEMIKVHIASWCIPNKLFQNNSITEINSN

RVW92607.1 putative ribonuclease H protein [Vitis vinifera]7.7e-0424.09Show/hide
Query:  PKLVLNPNACPSCLTESNDIHHVCFNCSSSEHILRAPFQ-SDCSWICNLRAKDNTFAFLCSHGSRRKARTL-QPNLVKSSISNWFERNKKIFYNKCAPWG
        P   L+PN C  C+     + H+  +CS ++ +    FQ +   W+      D  F      GS ++   L Q   +      W ERN +IF +K    G
Subjt:  PKLVLNPNACPSCLTESNDIHHVCFNCSSSEHILRAPFQ-SDCSWICNLRAKDNTFAFLCSHGSRRKARTL-QPNLVKSSISNWFERNKKIFYNKCAPWG

Query:  ESFEMIKVHIASWCIPNKLFQNNSITEINSNWEVFCK
          ++ I+   + W   +K+F+   +  +  +W   CK
Subjt:  ESFEMIKVHIASWCIPNKLFQNNSITEINSNWEVFCK

XP_038903695.1 uncharacterized protein LOC120090219 [Benincasa hispida]1.4e-1031.79Show/hide
Query:  ITEEVPKLVLNPNACPSCLTESNDIHHVCFNCSSSEHILRAPFQSDCSW------------ICNLRAKDNTFAFLCSHGSRRKARTLQPNLVKSSISN-W
        + ++ P   L+P  CP CL  S    H+ F C         P+ S C W            +CN   K N F  L    S +  R L  N VK+ +++ W
Subjt:  ITEEVPKLVLNPNACPSCLTESNDIHHVCFNCSSSEHILRAPFQSDCSW------------ICNLRAKDNTFAFLCSHGSRRKARTLQPNLVKSSISN-W

Query:  FERNKKIFYNKCAPWGESFEMIKVHIASWCIPNKLFQNNSITEINSNWEVF
        FERN++IFYNK     +  E  +   +SWC+ +  F+  S+++ N NWE F
Subjt:  FERNKKIFYNKCAPWGESFEMIKVHIASWCIPNKLFQNNSITEINSNWEVF

TrEMBL top hitse value%identityAlignment
A0A438EZ36 LINE-1 retrotransposable element ORF2 protein3.7e-0424.09Show/hide
Query:  PKLVLNPNACPSCLTESNDIHHVCFNCSSSEHILRAPFQ-SDCSWICNLRAKDNTFAFLCSHGSRRKARTL-QPNLVKSSISNWFERNKKIFYNKCAPWG
        P   L+PN C  C+     + H+  +CS ++ +    FQ +   W+      D  F      GS ++   L Q   +      W ERN +IF +K    G
Subjt:  PKLVLNPNACPSCLTESNDIHHVCFNCSSSEHILRAPFQ-SDCSWICNLRAKDNTFAFLCSHGSRRKARTL-QPNLVKSSISNWFERNKKIFYNKCAPWG

Query:  ESFEMIKVHIASWCIPNKLFQNNSITEINSNWEVFCK
          ++ I+   + W   +K+F+   +  +  +W   CK
Subjt:  ESFEMIKVHIASWCIPNKLFQNNSITEINSNWEVFCK

A0A5A7V5N8 GPI-anchor transamidase isoform X12.8e-0732.09Show/hide
Query:  LNPNACPSCLTESNDIHHVCFNCSSS----EHILRAPFQSDCSWICNLRAKDNTFAFLCSHGSRRKARTLQPNLVKSSISN-WFERNKKIFYNKCAPWGE
        L P+AC  CL E  D+  + F C  S    E++L + F  D  W  +     N    L     +   R +  N+ K+ +S+ WFE N++IF  K   W E
Subjt:  LNPNACPSCLTESNDIHHVCFNCSSS----EHILRAPFQSDCSWICNLRAKDNTFAFLCSHGSRRKARTLQPNLVKSSISN-WFERNKKIFYNKCAPWGE

Query:  SFEMIKVHIASWCIPNKLFQNNSITEINSNWEVF
          ++ K + A+WC+ NK F + SI +++ NW  F
Subjt:  SFEMIKVHIASWCIPNKLFQNNSITEINSNWEVF

A0A5A7VLA2 Mediator of RNA polymerase II transcription subunit 8 isoform X12.2e-0444.9Show/hide
Query:  NWFERNKKIFYNKCAPWGESFEMIKVHIASWCIPNKLFQNNSITEINSN
        NWFERN++IF NK +PW    E+ +++ +SWC  +K F+  SI +I+ N
Subjt:  NWFERNKKIFYNKCAPWGESFEMIKVHIASWCIPNKLFQNNSITEINSN

A5BKH7 Reverse transcriptase domain-containing protein2.2e-0424.09Show/hide
Query:  PKLVLNPNACPSCLTESNDIHHVCFNCSSSEHILRAPFQ-SDCSWICNLRAKDNTFAFLCSHGSRRKARTL-QPNLVKSSISNWFERNKKIFYNKCAPWG
        P   L+PN C  C+     + H+  +CS ++ +    FQ +   W+      D  F      GS ++   L Q   +      W ERN +IF +K    G
Subjt:  PKLVLNPNACPSCLTESNDIHHVCFNCSSSEHILRAPFQ-SDCSWICNLRAKDNTFAFLCSHGSRRKARTL-QPNLVKSSISNWFERNKKIFYNKCAPWG

Query:  ESFEMIKVHIASWCIPNKLFQNNSITEINSNWEVFCK
          ++ I+   + W   +K+F+   +  +  +W   CK
Subjt:  ESFEMIKVHIASWCIPNKLFQNNSITEINSNWEVFCK

A5C377 Uncharacterized protein3.7e-0424.09Show/hide
Query:  PKLVLNPNACPSCLTESNDIHHVCFNCSSSEHILRAPFQ-SDCSWICNLRAKDNTFAFLCSHGSRRKARTL-QPNLVKSSISNWFERNKKIFYNKCAPWG
        P   L+PN C  C+     + H+  +CS ++ +    FQ +   W+      D  F      GS ++   L Q   +      W ERN +IF +K    G
Subjt:  PKLVLNPNACPSCLTESNDIHHVCFNCSSSEHILRAPFQ-SDCSWICNLRAKDNTFAFLCSHGSRRKARTL-QPNLVKSSISNWFERNKKIFYNKCAPWG

Query:  ESFEMIKVHIASWCIPNKLFQNNSITEINSNWEVFCK
          ++ I+   + W   +K+F+   +  +  +W   CK
Subjt:  ESFEMIKVHIASWCIPNKLFQNNSITEINSNWEVFCK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATTACAGAGGAAGTGCCCAAATTGGTCTTAAACCCAAATGCTTGTCCTTCATGTCTTACTGAGAGCAACGATATTCATCATGTTTGTTTTAACTGTTCATCCAGTGAGCA
CATTTTGAGGGCTCCCTTTCAGTCTGATTGCTCATGGATTTGCAATTTGAGGGCTAAGGATAATACATTTGCTTTTCTTTGCAGCCATGGTTCTAGAAGGAAAGCAAGAA
CCCTTCAGCCCAATCTTGTTAAATCTTCAATCTCAAATTGGTTTGAAAGAAACAAGAAGATCTTTTACAATAAATGTGCTCCTTGGGGTGAAAGCTTTGAGATGATCAAA
GTTCATATAGCTTCTTGGTGTATTCCAAACAAACTTTTTCAAAATAATTCCATCACTGAGATTAACTCTAATTGGGAAGTTTTTTGTAAGATTGTACTG
mRNA sequenceShow/hide mRNA sequence
ATTACAGAGGAAGTGCCCAAATTGGTCTTAAACCCAAATGCTTGTCCTTCATGTCTTACTGAGAGCAACGATATTCATCATGTTTGTTTTAACTGTTCATCCAGTGAGCA
CATTTTGAGGGCTCCCTTTCAGTCTGATTGCTCATGGATTTGCAATTTGAGGGCTAAGGATAATACATTTGCTTTTCTTTGCAGCCATGGTTCTAGAAGGAAAGCAAGAA
CCCTTCAGCCCAATCTTGTTAAATCTTCAATCTCAAATTGGTTTGAAAGAAACAAGAAGATCTTTTACAATAAATGTGCTCCTTGGGGTGAAAGCTTTGAGATGATCAAA
GTTCATATAGCTTCTTGGTGTATTCCAAACAAACTTTTTCAAAATAATTCCATCACTGAGATTAACTCTAATTGGGAAGTTTTTTGTAAGATTGTACTG
Protein sequenceShow/hide protein sequence
ITEEVPKLVLNPNACPSCLTESNDIHHVCFNCSSSEHILRAPFQSDCSWICNLRAKDNTFAFLCSHGSRRKARTLQPNLVKSSISNWFERNKKIFYNKCAPWGESFEMIK
VHIASWCIPNKLFQNNSITEINSNWEVFCKIVL