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MS023443 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS023443
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionAvrRpt-cleavage domain-containing protein
Genome locationscaffold982:46341..46514
RNA-Seq ExpressionMS023443
SyntenyMS023443
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
InterPro domainsIPR008700 - RIN4, pathogenic type III effector avirulence factor Avr cleavage site
IPR040387 - RPM1-interacting protein 4/NOI4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0065744.1 RPM1-interacting protein 4-like [Cucumis melo var. makuwa]4.2e-1785.96Show/hide
Query:  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQSESSPKNAQGKRVADSGK
        EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQ ES  K  Q K VAD GK
Subjt:  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQSESSPKNAQGKRVADSGK
XP_008449047.1 PREDICTED: RPM1-interacting protein 4-like [Cucumis melo]4.2e-1785.96Show/hide
Query:  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQSESSPKNAQGKRVADSGK
        EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQ ES  K  Q K VAD GK
Subjt:  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQSESSPKNAQGKRVADSGK
XP_022144004.1 RPM1-interacting protein 4-like isoform X1 [Momordica charantia]1.1e-22100Show/hide
Query:  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQSESSPKNAQGKRVADSGK
        EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQSESSPKNAQGKRVADSGK
Subjt:  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQSESSPKNAQGKRVADSGK
XP_022144005.1 RPM1-interacting protein 4-like isoform X2 [Momordica charantia]1.1e-22100Show/hide
Query:  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQSESSPKNAQGKRVADSGK
        EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQSESSPKNAQGKRVADSGK
Subjt:  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQSESSPKNAQGKRVADSGK
XP_038905925.1 protein NOI4-like [Benincasa hispida]1.2e-1684.21Show/hide
Query:  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQSESSPKNAQGKRVADSGK
        EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQ ES  K  Q K  AD GK
Subjt:  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQSESSPKNAQGKRVADSGK
TrEMBL top hitse value%identityAlignment
A0A0A0L7F7 AvrRpt-cleavage domain-containing protein5.9e-1784.21Show/hide
Query:  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQSESSPKNAQGKRVADSGK
        EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQ ES  K  + K VAD GK
Subjt:  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQSESSPKNAQGKRVADSGK
A0A1S3BL66 RPM1-interacting protein 4-like2.0e-1785.96Show/hide
Query:  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQSESSPKNAQGKRVADSGK
        EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQ ES  K  Q K VAD GK
Subjt:  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQSESSPKNAQGKRVADSGK
A0A5D3CRF8 RPM1-interacting protein 4-like2.0e-1785.96Show/hide
Query:  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQSESSPKNAQGKRVADSGK
        EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQ ES  K  Q K VAD GK
Subjt:  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQSESSPKNAQGKRVADSGK
A0A6J1CQF4 RPM1-interacting protein 4-like isoform X25.5e-23100Show/hide
Query:  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQSESSPKNAQGKRVADSGK
        EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQSESSPKNAQGKRVADSGK
Subjt:  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQSESSPKNAQGKRVADSGK
A0A6J1CR09 RPM1-interacting protein 4-like isoform X15.5e-23100Show/hide
Query:  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQSESSPKNAQGKRVADSGK
        EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQSESSPKNAQGKRVADSGK
Subjt:  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQSESSPKNAQGKRVADSGK
SwissProt top hitse value%identityAlignment
O22633 Protein NOI42.4e-1577.55Show/hide
Query:  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQSESSPKNAQG
        +KG+PLPKFGEWDVN+PASAEGFTVIFNKARDEKKTGG+  S  K+++G
Subjt:  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQSESSPKNAQG
Q8GYN5 RPM1-interacting protein 41.2e-0651.11Show/hide
Query:  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQSESSPK
        EK   +PKFG+WD NNP+SA+G+T IFNK R+E+ +G     S +
Subjt:  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQSESSPK
Arabidopsis top hitse value%identityAlignment
AT2G04410.1 RPM1-interacting protein 4 (RIN4) family protein3.2e-1573.47Show/hide
Query:  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQSESSPKNAQG
        +KG+PLPKFGEWDVN+P+SAEGFTVIFNKAR+EKK GG+S+S  K+  G
Subjt:  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQSESSPKNAQG
AT5G55850.1 RPM1-interacting protein 4 (RIN4) family protein1.7e-1677.55Show/hide
Query:  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQSESSPKNAQG
        +KG+PLPKFGEWDVN+PASAEGFTVIFNKARDEKKTGG+  S  K+++G
Subjt:  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQSESSPKNAQG
AT5G55850.2 RPM1-interacting protein 4 (RIN4) family protein1.3e-1676Show/hide
Query:  QEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQSESSPKNAQG
        ++KG+PLPKFGEWDVN+PASAEGFTVIFNKARDEKKTGG+  S  K+++G
Subjt:  QEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQSESSPKNAQG
AT5G55850.3 RPM1-interacting protein 4 (RIN4) family protein1.3e-1676Show/hide
Query:  QEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQSESSPKNAQG
        ++KG+PLPKFGEWDVN+PASAEGFTVIFNKARDEKKTGG+  S  K+++G
Subjt:  QEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQSESSPKNAQG
AT5G63270.1 RPM1-interacting protein 4 (RIN4) family protein1.0e-1372.34Show/hide
Query:  QEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQSESSPKN
        + KG+PLPKFGEWDVNNPASAEGFTVIF+KA DEKKT   S + P +
Subjt:  QEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQSESSPKN

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CAGGAGAAGGGTCAGCCACTACCGAAGTTTGGAGAATGGGATGTTAATAATCCTGCTTCAGCAGAGGGCTTCACTGTGATCTTTAACAAAGCAAGAGATGAGAAGAAAAC
CGGTGGCCAATCAGAATCGTCACCTAAAAACGCTCAGGGGAAACGTGTAGCAGATTCTGGCAAA
mRNA sequenceShow/hide mRNA sequence
CAGGAGAAGGGTCAGCCACTACCGAAGTTTGGAGAATGGGATGTTAATAATCCTGCTTCAGCAGAGGGCTTCACTGTGATCTTTAACAAAGCAAGAGATGAGAAGAAAAC
CGGTGGCCAATCAGAATCGTCACCTAAAAACGCTCAGGGGAAACGTGTAGCAGATTCTGGCAAA
Protein sequenceShow/hide protein sequence
QEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQSESSPKNAQGKRVADSGK