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MS023446 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS023446
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProtein Ycf2
Genome locationscaffold982:74656..74771
RNA-Seq ExpressionMS023446
SyntenyMS023446
Gene Ontology termsGO:0009570 - chloroplast stroma (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0016887 - ATPase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ARC99479.1 hypothetical protein RF2 [Heteromeles arbutifolia]2.3e-1197.44Show/hide
Query:  TLLLRPEPRNPLD-MQNGSCSIVDQRFLYEQYESEFEEG
        TLLLRPEPRNPLD MQNGSCSIVDQRFLYEQYESEFEEG
Subjt:  TLLLRPEPRNPLD-MQNGSCSIVDQRFLYEQYESEFEEG
QGQ51010.1 hypothetical chloroplast RF2 [Phippsiomeles microcarpa subsp. hintonii]2.3e-1197.44Show/hide
Query:  TLLLRPEPRNPLD-MQNGSCSIVDQRFLYEQYESEFEEG
        TLLLRPEPRNPLD MQNGSCSIVDQRFLYEQYESEFEEG
Subjt:  TLLLRPEPRNPLD-MQNGSCSIVDQRFLYEQYESEFEEG
YP_009554402.1 Ycf2 [Carya kweichowensis]2.3e-1197.44Show/hide
Query:  TLLLRPEPRNPLD-MQNGSCSIVDQRFLYEQYESEFEEG
        TLLLRPEPRNPLD MQNGSCSIVDQRFLYEQYESEFEEG
Subjt:  TLLLRPEPRNPLD-MQNGSCSIVDQRFLYEQYESEFEEG
YP_009723607.1 hypothetical chloroplast RF2 [Cydonia oblonga]2.3e-1197.44Show/hide
Query:  TLLLRPEPRNPLD-MQNGSCSIVDQRFLYEQYESEFEEG
        TLLLRPEPRNPLD MQNGSCSIVDQRFLYEQYESEFEEG
Subjt:  TLLLRPEPRNPLD-MQNGSCSIVDQRFLYEQYESEFEEG
YP_009865147.1 hypothetical protein RF2 [Alchemilla argyrophylla]2.3e-1197.44Show/hide
Query:  TLLLRPEPRNPLD-MQNGSCSIVDQRFLYEQYESEFEEG
        TLLLRPEPRNPLD MQNGSCSIVDQRFLYEQYESEFEEG
Subjt:  TLLLRPEPRNPLD-MQNGSCSIVDQRFLYEQYESEFEEG
TrEMBL top hitse value%identityAlignment
A0A649Z731 Protein Ycf21.1e-1197.44Show/hide
Query:  TLLLRPEPRNPLD-MQNGSCSIVDQRFLYEQYESEFEEG
        TLLLRPEPRNPLD MQNGSCSIVDQRFLYEQYESEFEEG
Subjt:  TLLLRPEPRNPLD-MQNGSCSIVDQRFLYEQYESEFEEG
A0A649Z9F3 Protein Ycf21.1e-1197.44Show/hide
Query:  TLLLRPEPRNPLD-MQNGSCSIVDQRFLYEQYESEFEEG
        TLLLRPEPRNPLD MQNGSCSIVDQRFLYEQYESEFEEG
Subjt:  TLLLRPEPRNPLD-MQNGSCSIVDQRFLYEQYESEFEEG
A0A649ZBM5 Protein Ycf21.1e-1197.44Show/hide
Query:  TLLLRPEPRNPLD-MQNGSCSIVDQRFLYEQYESEFEEG
        TLLLRPEPRNPLD MQNGSCSIVDQRFLYEQYESEFEEG
Subjt:  TLLLRPEPRNPLD-MQNGSCSIVDQRFLYEQYESEFEEG
A0A650B2E5 Protein Ycf21.1e-1197.44Show/hide
Query:  TLLLRPEPRNPLD-MQNGSCSIVDQRFLYEQYESEFEEG
        TLLLRPEPRNPLD MQNGSCSIVDQRFLYEQYESEFEEG
Subjt:  TLLLRPEPRNPLD-MQNGSCSIVDQRFLYEQYESEFEEG
A0A7S8FJL7 Ycf21.1e-1197.44Show/hide
Query:  TLLLRPEPRNPLD-MQNGSCSIVDQRFLYEQYESEFEEG
        TLLLRPEPRNPLD MQNGSCSIVDQRFLYEQYESEFEEG
Subjt:  TLLLRPEPRNPLD-MQNGSCSIVDQRFLYEQYESEFEEG
SwissProt top hitse value%identityAlignment
P09976 Protein Ycf21.9e-1392.31Show/hide
Query:  TLLLRPEPRNPLD-MQNGSCSIVDQRFLYEQYESEFEEG
        TLLLRPEPRNPLD MQNGSCSI+DQRFLYE+YESEFEEG
Subjt:  TLLLRPEPRNPLD-MQNGSCSIVDQRFLYEQYESEFEEG
Q09WV7 Protein Ycf28.6e-1494.87Show/hide
Query:  TLLLRPEPRNPLD-MQNGSCSIVDQRFLYEQYESEFEEG
        TLLLRPEPRNPLD MQNGSCSIVDQRFLYEQY+SEFEEG
Subjt:  TLLLRPEPRNPLD-MQNGSCSIVDQRFLYEQYESEFEEG
Q0ZIV6 Protein Ycf28.6e-1494.87Show/hide
Query:  TLLLRPEPRNPLD-MQNGSCSIVDQRFLYEQYESEFEEG
        TLLLRPEPRNPLD MQNGSCSIVDQRFLYE+YESEFEEG
Subjt:  TLLLRPEPRNPLD-MQNGSCSIVDQRFLYEQYESEFEEG
Q33BV3 Protein Ycf21.9e-1392.31Show/hide
Query:  TLLLRPEPRNPLD-MQNGSCSIVDQRFLYEQYESEFEEG
        TLLLRPEPRNPLD MQNGSCSI+DQRFLYE+YESEFEEG
Subjt:  TLLLRPEPRNPLD-MQNGSCSIVDQRFLYEQYESEFEEG
Q3C1N4 Protein Ycf21.9e-1392.31Show/hide
Query:  TLLLRPEPRNPLD-MQNGSCSIVDQRFLYEQYESEFEEG
        TLLLRPEPRNPLD MQNGSCSI+DQRFLYE+YESEFEEG
Subjt:  TLLLRPEPRNPLD-MQNGSCSIVDQRFLYEQYESEFEEG
Arabidopsis top hitse value%identityAlignment
ATCG00860.1 Chloroplast Ycf2;ATPase, AAA type, core2.4e-1182.05Show/hide
Query:  TLLLRPEPRNPL-DMQNGSCSIVDQRFLYEQYESEFEEG
        TLL R EPR+PL  MQ+GSCSIVDQRFLYE+YESEFEEG
Subjt:  TLLLRPEPRNPL-DMQNGSCSIVDQRFLYEQYESEFEEG
ATCG01280.1 Chloroplast Ycf2;ATPase, AAA type, core2.4e-1182.05Show/hide
Query:  TLLLRPEPRNPL-DMQNGSCSIVDQRFLYEQYESEFEEG
        TLL R EPR+PL  MQ+GSCSIVDQRFLYE+YESEFEEG
Subjt:  TLLLRPEPRNPL-DMQNGSCSIVDQRFLYEQYESEFEEG

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ACATTGCTTCTTCGACCCGAACCCAGGAATCCCTTAGATATGCAAAATGGATCTTGTTCTATCGTTGATCAGAGATTTCTCTATGAACAATACGAATCGGAGTTTGAAGA
AGGG
mRNA sequenceShow/hide mRNA sequence
ACATTGCTTCTTCGACCCGAACCCAGGAATCCCTTAGATATGCAAAATGGATCTTGTTCTATCGTTGATCAGAGATTTCTCTATGAACAATACGAATCGGAGTTTGAAGA
AGGG
Protein sequenceShow/hide protein sequence
TLLLRPEPRNPLDMQNGSCSIVDQRFLYEQYESEFEEG