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MS023474 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS023474
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionprotein DELETION OF SUV3 SUPPRESSOR 1(I)-like
Genome locationscaffold787:148522..148647
RNA-Seq ExpressionMS023474
SyntenyMS023474
Gene Ontology termsGO:0000724 - double-strand break repair via homologous recombination (biological process)
GO:0006406 - mRNA export from nucleus (biological process)
GO:0043248 - proteasome assembly (biological process)
GO:0008541 - proteasome regulatory particle, lid subcomplex (cellular component)
InterPro domainsIPR007834 - DSS1/SEM1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599102.1 Protein DSS1-like ON CHROMOSOME V, partial [Cucurbita argyrosperma subsp. sororia]2.9e-1290.48Show/hide
Query:  EWEVKEGKEITQQWEDDWDDDDVNDDFSVQLRRELENNGEKK
        EWEVKEGKEITQQWEDDWDDDDVNDDFS+QL+RELE+N EKK
Subjt:  EWEVKEGKEITQQWEDDWDDDDVNDDFSVQLRRELENNGEKK

XP_004144232.1 protein DSS1 HOMOLOG ON CHROMOSOME V [Cucumis sativus]7.7e-1392.86Show/hide
Query:  EWEVKEGKEITQQWEDDWDDDDVNDDFSVQLRRELENNGEKK
        EWEVKEGKEITQQWEDDWDDDDVNDDFS+QL+RELENN EKK
Subjt:  EWEVKEGKEITQQWEDDWDDDDVNDDFSVQLRRELENNGEKK

XP_022153100.1 protein DSS1 HOMOLOG ON CHROMOSOME V-like [Momordica charantia]3.1e-14100Show/hide
Query:  EWEVKEGKEITQQWEDDWDDDDVNDDFSVQLRRELENNGEKK
        EWEVKEGKEITQQWEDDWDDDDVNDDFSVQLRRELENNGEKK
Subjt:  EWEVKEGKEITQQWEDDWDDDDVNDDFSVQLRRELENNGEKK

XP_023546762.1 protein DSS1 HOMOLOG ON CHROMOSOME V-like isoform X2 [Cucurbita pepo subsp. pepo]2.9e-1290.48Show/hide
Query:  EWEVKEGKEITQQWEDDWDDDDVNDDFSVQLRRELENNGEKK
        EWEVKEGKEITQQWEDDWDDDDVNDDFS+QL+RELE+N EKK
Subjt:  EWEVKEGKEITQQWEDDWDDDDVNDDFSVQLRRELENNGEKK

XP_038884052.1 protein DSS1 HOMOLOG ON CHROMOSOME V-like [Benincasa hispida]7.7e-1392.86Show/hide
Query:  EWEVKEGKEITQQWEDDWDDDDVNDDFSVQLRRELENNGEKK
        EWEVKEGKEITQQWEDDWDDDDVNDDFS+QL+RELENN EKK
Subjt:  EWEVKEGKEITQQWEDDWDDDDVNDDFSVQLRRELENNGEKK

TrEMBL top hitse value%identityAlignment
A0A0A0KIG9 Uncharacterized protein3.7e-1392.86Show/hide
Query:  EWEVKEGKEITQQWEDDWDDDDVNDDFSVQLRRELENNGEKK
        EWEVKEGKEITQQWEDDWDDDDVNDDFS+QL+RELENN EKK
Subjt:  EWEVKEGKEITQQWEDDWDDDDVNDDFSVQLRRELENNGEKK

A0A1S3CMK4 protein DSS1 HOMOLOG ON CHROMOSOME V-like3.7e-1392.86Show/hide
Query:  EWEVKEGKEITQQWEDDWDDDDVNDDFSVQLRRELENNGEKK
        EWEVKEGKEITQQWEDDWDDDDVNDDFS+QL+RELENN EKK
Subjt:  EWEVKEGKEITQQWEDDWDDDDVNDDFSVQLRRELENNGEKK

A0A6J1DJN7 protein DSS1 HOMOLOG ON CHROMOSOME V-like1.5e-14100Show/hide
Query:  EWEVKEGKEITQQWEDDWDDDDVNDDFSVQLRRELENNGEKK
        EWEVKEGKEITQQWEDDWDDDDVNDDFSVQLRRELENNGEKK
Subjt:  EWEVKEGKEITQQWEDDWDDDDVNDDFSVQLRRELENNGEKK

A0A6J1KGK6 protein DELETION OF SUV3 SUPPRESSOR 1(I)-like3.2e-1290.48Show/hide
Query:  EWEVKEGKEITQQWEDDWDDDDVNDDFSVQLRRELENNGEKK
        EWEVKEGKEITQQWEDDWDDDDVNDDFS+QL+RELE+N EKK
Subjt:  EWEVKEGKEITQQWEDDWDDDDVNDDFSVQLRRELENNGEKK

A0A6J1KMT1 protein DSS1 HOMOLOG ON CHROMOSOME V-like3.2e-1288.1Show/hide
Query:  EWEVKEGKEITQQWEDDWDDDDVNDDFSVQLRRELENNGEKK
        EWEVKEGKEITQQWEDDWDDDDVNDDFS+QL+RELE+N E+K
Subjt:  EWEVKEGKEITQQWEDDWDDDDVNDDFSVQLRRELENNGEKK

SwissProt top hitse value%identityAlignment
Q9FL96 Protein DSS1 HOMOLOG ON CHROMOSOME V4.6e-0867.44Show/hide
Query:  EW-EVKEGKEITQQWEDDWDDDDVNDDFSVQLRRELENNGEKK
        +W E +E KE++ QWEDDWDDDDV+DDFS QL++ELEN  EKK
Subjt:  EW-EVKEGKEITQQWEDDWDDDDVNDDFSVQLRRELENNGEKK

Q9XIR8 Protein DELETION OF SUV3 SUPPRESSOR 1(I)1.9e-0972.09Show/hide
Query:  EW-EVKEGKEITQQWEDDWDDDDVNDDFSVQLRRELENNGEKK
        +W E +E KE++QQWEDDWDDDDVNDDFS QLR+ELEN  +KK
Subjt:  EW-EVKEGKEITQQWEDDWDDDDVNDDFSVQLRRELENNGEKK

Arabidopsis top hitse value%identityAlignment
AT1G64750.1 deletion of SUV3 suppressor 1(I)1.3e-1072.09Show/hide
Query:  EW-EVKEGKEITQQWEDDWDDDDVNDDFSVQLRRELENNGEKK
        +W E +E KE++QQWEDDWDDDDVNDDFS QLR+ELEN  +KK
Subjt:  EW-EVKEGKEITQQWEDDWDDDDVNDDFSVQLRRELENNGEKK

AT1G64750.2 deletion of SUV3 suppressor 1(I)1.3e-1072.09Show/hide
Query:  EW-EVKEGKEITQQWEDDWDDDDVNDDFSVQLRRELENNGEKK
        +W E +E KE++QQWEDDWDDDDVNDDFS QLR+ELEN  +KK
Subjt:  EW-EVKEGKEITQQWEDDWDDDDVNDDFSVQLRRELENNGEKK

AT1G64750.3 deletion of SUV3 suppressor 1(I)1.3e-1072.09Show/hide
Query:  EW-EVKEGKEITQQWEDDWDDDDVNDDFSVQLRRELENNGEKK
        +W E +E KE++QQWEDDWDDDDVNDDFS QLR+ELEN  +KK
Subjt:  EW-EVKEGKEITQQWEDDWDDDDVNDDFSVQLRRELENNGEKK

AT5G45010.1 DSS1 homolog on chromosome V3.2e-0967.44Show/hide
Query:  EW-EVKEGKEITQQWEDDWDDDDVNDDFSVQLRRELENNGEKK
        +W E +E KE++ QWEDDWDDDDV+DDFS QL++ELEN  EKK
Subjt:  EW-EVKEGKEITQQWEDDWDDDDVNDDFSVQLRRELENNGEKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GAGTGGGAAGTCAAGGAAGGTAAAGAAATTACTCAGCAGTGGGAAGACGACTGGGATGACGACGATGTCAACGACGACTTCTCGGTGCAGCTTAGGAGAGAATTGGAGAA
CAACGGTGAGAAAAAA
mRNA sequenceShow/hide mRNA sequence
GAGTGGGAAGTCAAGGAAGGTAAAGAAATTACTCAGCAGTGGGAAGACGACTGGGATGACGACGATGTCAACGACGACTTCTCGGTGCAGCTTAGGAGAGAATTGGAGAA
CAACGGTGAGAAAAAA
Protein sequenceShow/hide protein sequence
EWEVKEGKEITQQWEDDWDDDDVNDDFSVQLRRELENNGEKK