CuGenDBv2

Gene ID	MS023478
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Cytochrome b6-f complex subunit 4
Genome location	scaffold787:186001..186255
RNA-Seq Expression	MS023478
Synteny	MS023478
Gene Ontology terms	GO:0009767 - photosynthetic electron transport chain (biological process) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0045156 - electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity (molecular function) GO:0045158 - electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity (molecular function)
InterPro domains	IPR005798 - Cytochrome b/b6, C-terminal IPR005870 - Cytochrome b6/f complex, subunit IV IPR036150 - Cytochrome b/b6, C-terminal domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

QGT33490.1 cytochrome b6-f complex subunit IV [Chamaesium delavayi]

4.1e-37

97.65

Show/hide

Query:  LATWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENINKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF
        L  WYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENINKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF
Subjt:  LATWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENINKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF

YP_009418912.1 cytochrome b6-f complex subunit IV [Gordonia fruticosa]

4.1e-37

97.65

Show/hide

Query:  LATWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENINKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF
        L  WYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENINKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF
Subjt:  LATWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENINKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF

YP_009456092.1 cytochrome b6/f complex subunit IV [Momordica charantia]

4.1e-37

97.65

Show/hide

Query:  LATWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENINKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF
        L  WYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENINKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF
Subjt:  LATWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENINKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF

YP_009650500.1 cytochrome b6/f complex subunit IV [Stellera chamaejasme]

4.1e-37

97.65

Show/hide

Query:  LATWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENINKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF
        L  WYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENINKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF
Subjt:  LATWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENINKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF

YP_009728067.1 cytochrome b6/f complex subunit IV [Wikstroemia chamaedaphne]

4.1e-37

97.65

Show/hide

Query:  LATWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENINKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF
        L  WYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENINKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF
Subjt:  LATWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENINKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF

TrEMBL top hits

e value

%identity

Alignment

A0A221HV36 Cytochrome b6-f complex subunit 4

2.0e-37

97.65

Show/hide

Query:  LATWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENINKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF
        L  WYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENINKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF
Subjt:  LATWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENINKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF

A0A4D6Q092 Cytochrome b6-f complex subunit 4

2.0e-37

97.65

Show/hide

Query:  LATWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENINKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF
        L  WYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENINKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF
Subjt:  LATWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENINKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF

A0A650DM17 Cytochrome b6-f complex subunit 4

2.0e-37

97.65

Show/hide

Query:  LATWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENINKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF
        L  WYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENINKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF
Subjt:  LATWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENINKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF

A0A650DN45 Cytochrome b6-f complex subunit 4

2.0e-37

97.65

Show/hide

Query:  LATWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENINKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF
        L  WYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENINKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF
Subjt:  LATWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENINKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF

A0A6C0RVY6 Cytochrome b6-f complex subunit 4

2.0e-37

97.65

Show/hide

Query:  LATWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENINKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF
        L  WYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENINKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF
Subjt:  LATWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENINKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF

SwissProt top hits

e value

%identity

Alignment

A0A366 Cytochrome b6-f complex subunit 4

7.0e-40

96.47

Show/hide

Query:  LATWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENINKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF
        L  WYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLEN+NKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF
Subjt:  LATWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENINKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF

Q1KXS8 Cytochrome b6-f complex subunit 4

7.0e-40

96.47

Show/hide

Query:  LATWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENINKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF
        L  WYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLEN+NKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF
Subjt:  LATWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENINKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF

Q2L939 Cytochrome b6-f complex subunit 4

7.0e-40

96.47

Show/hide

Query:  LATWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENINKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF
        L  WYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLEN+NKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF
Subjt:  LATWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENINKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF

Q4VZK4 Cytochrome b6-f complex subunit 4

7.0e-40

96.47

Show/hide

Query:  LATWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENINKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF
        L  WYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLEN+NKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF
Subjt:  LATWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENINKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF

Q7FNS2 Cytochrome b6-f complex subunit 4

7.0e-40

96.47

Show/hide

Query:  LATWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENINKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF
        L  WYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLEN+NKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF
Subjt:  LATWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENINKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF

Arabidopsis top hits

e value

%identity

Alignment

ATCG00730.1 photosynthetic electron transfer D

1.4e-40

95.29

Show/hide

Query:  LATWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENINKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF
        L  WYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLEN+NKFQNPFRRPVATTVFLIGTA ALWLGIGATLPIDKSLTLGLF
Subjt:  LATWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENINKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

CTTGCCACATGGTATTTCTTTCCCGTATTTCAAATACTTCGTACAGTGCCAAATAAGTTATTGGGTGTTCTTTTAATGGTTTCCGTACCTGCGGGATTATTAACTGTACC
ATTTTTGGAGAATATCAATAAATTCCAAAATCCATTTCGTCGTCCAGTAGCGACGACCGTCTTTTTGATTGGTACCGCAGTAGCCCTTTGGTTGGGTATTGGAGCAACAT
TACCGATTGATAAATCCCTAACTTTAGGTCTTTTT

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

LATWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENINKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF

MS023478 (gene) of Bitter gourd (TR) v1 genome