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MS023572 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS023572
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProtein FAM83H
Genome locationscaffold1258:257710..258342
RNA-Seq ExpressionMS023572
SyntenyMS023572
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4369213.1 hypothetical protein G4B88_009511 [Cannabis sativa]8.6e-2833.07Show/hide
Query:  SNPKHTPRRPPIVATEDYAGLGSNPKHTPRPPP-----MMATEDYAGPGSNPKH--TPRRPP---MVATEGYAGPRYNPKHTLLRPSM-----VATEDYA
        SNP  T  + P +  +DY  +G NP+H P  PP      ++ +DYA P  NP+H   P++P     ++ + YA P  NP+H    P M     +  +DY 
Subjt:  SNPKHTPRRPPIVATEDYAGLGSNPKHTPRPPP-----MMATEDYAGPGSNPKH--TPRRPP---MVATEGYAGPRYNPKHTLLRPSM-----VATEDYA

Query:  SPGSNPKHTPRRPPM-----VATEDYVGPGSNPKHTPRP-----PSMVATEDYVGPESNPKHTPGRPPMVT------IEDYAGPGSNPKHTPRRPPM---
          G NP+H P  PP+     ++ +DY  P  NP+H P P      + ++ +DY  P SNP+H    PP++T      ++DY   G NP+H P  PP+   
Subjt:  SPGSNPKHTPRRPPM-----VATEDYVGPGSNPKHTPRP-----PSMVATEDYVGPESNPKHTPGRPPMVT------IEDYAGPGSNPKHTPRRPPM---

Query:  --VATEDYSGLGSNPKHTSRP-----PSMVATEDYVGPGSNPKHTPGRPPM
          ++ +DY+    NP++   P      + ++ +DY  PGSNP+H    PPM
Subjt:  --VATEDYSGLGSNPKHTSRP-----PSMVATEDYVGPGSNPKHTPGRPPM

KAF4369216.1 hypothetical protein G4B88_009514 [Cannabis sativa]1.3e-2836.51Show/hide
Query:  GSNPKHTPRRPP-----IVATEDYAGLGSNPKHTPRPPPMMAT-------EDYAGPGSNPKHTPRRPPMVATEGYAGPRYNPKHTLLRPSMVATEDYASP
        G NP+H P  PP      ++ +DYA    NP+H  +PPP   T       +DYA PGSNP+H    PP++  E    P + P   L   + ++ +DYA+P
Subjt:  GSNPKHTPRRPP-----IVATEDYAGLGSNPKHTPRPPPMMAT-------EDYAGPGSNPKHTPRRPPMVATEGYAGPRYNPKHTLLRPSMVATEDYASP

Query:  GSNPKHTPRRPPMVAT-------EDYVGPGSNPKHTPRPPSM-----VATEDYVGPESNPKHTPGRPPM-----VTIEDYAGPGSNPKHTPRRPPMVAT-
          NP+H P  PP   T       +DYV PGSNP+H   PP M     +  +DY     NP+H P  PP+     ++++DYA P  NPK+ P  PP   T 
Subjt:  GSNPKHTPRRPPMVAT-------EDYVGPGSNPKHTPRPPSM-----VATEDYVGPESNPKHTPGRPPM-----VTIEDYAGPGSNPKHTPRRPPMVAT-

Query:  ------EDYSGLGSNPKHTSRPPSM-----VATEDYVGPGSNPKHTPGRPPM
              +DY+  GSNP+H   PP M     +  + Y   G NP+H P  PP+
Subjt:  ------EDYSGLGSNPKHTSRPPSM-----VATEDYVGPGSNPKHTPGRPPM

QCD98561.1 hypothetical protein DEO72_LG6g3283 [Vigna unguiculata]1.7e-2341.45Show/hide
Query:  EDYAGLGSNPKHTPRPPPMM----ATEDYAGPGSNPKHTPRRPPMVATEGYAGPRYNPKHTLLRPSMVATEDYASPGSNPKHTPRRPPMV----ATEDYV
        +DY G GSNPKH P PP  +      +DY G  SNPKH P  PP    + Y                   +DY   GSNPKH P  P  +      +DY 
Subjt:  EDYAGLGSNPKHTPRPPPMM----ATEDYAGPGSNPKHTPRRPPMVATEGYAGPRYNPKHTLLRPSMVATEDYASPGSNPKHTPRRPPMV----ATEDYV

Query:  GPGSNPKHTPRPPSM-----VATEDYVGPESNPKHTPGRPPMVT----IEDYAGPGSNPKHTPRRP----PMVATEDYSGLGSNPKHTSRPPS
        G G+NPKH P PPS         +DY G  SNPKH P  P  +     ++DYAG GSNPKH P  P         +DY G GSNPKH   PPS
Subjt:  GPGSNPKHTPRPPSM-----VATEDYVGPESNPKHTPGRPPMVT----IEDYAGPGSNPKHTPRRP----PMVATEDYSGLGSNPKHTSRPPS

XP_030505386.1 sporozoite surface protein 2-like [Cannabis sativa]3.3e-2735.23Show/hide
Query:  GSNPKHTPRRPP-----IVATEDYAGLGSNPKHTPRPPPMMAT-------EDYAGPGSNPKHTPRRPPMVAT-------EGY----AGPRYNPKH-TLLR
        G NP+H P  PP      ++ +DYA    NP+H  +PPP   T       +DYA PGSNP+H  + PP + T       + Y      PR+ P H  L  
Subjt:  GSNPKHTPRRPP-----IVATEDYAGLGSNPKHTPRPPPMMAT-------EDYAGPGSNPKHTPRRPPMVAT-------EGY----AGPRYNPKH-TLLR

Query:  PSMVATEDYASPGSNPKHTPRRPPMVAT-------EDYVGPGSNPKHTPRPPSM-----VATEDYVGPESNPKHTPGRPPM-----VTIEDYAGPGSNPK
         + ++ +DYA P  NP+H P  PP   T       +DY  PGSNP+H   PP M     +  +DY     NP++ P  PP+     ++++DYA P  NP+
Subjt:  PSMVATEDYASPGSNPKHTPRRPPMVAT-------EDYVGPGSNPKHTPRPPSM-----VATEDYVGPESNPKHTPGRPPM-----VTIEDYAGPGSNPK

Query:  HTPRRPPMVAT-------EDYSGLGSNPKHTSRPPSM-----VATEDYVGPGSNPKHTPGRPPM
        + P  PP   T       +DY+  GSNP+H   PP M     +  +DY   G NP+H P  PP+
Subjt:  HTPRRPPMVAT-------EDYSGLGSNPKHTSRPPSM-----VATEDYVGPGSNPKHTPGRPPM

XP_038895781.1 circumsporozoite protein-like [Benincasa hispida]2.6e-1640.34Show/hide
Query:  HTPRRPPMVATEDYVGPGSNPKHTPRPPSMVATEDYVGPESNPKHTPGRPPMVTIEDYAGPGSNPKHTPRRPPMVATEDYSGLGSNPKH-TSRPPSMVAT
        H+  +   +   DY  PG+NP+H P  P M+   DY  P +NP+H P + PM+ I DY  PG+NP+H P +PPM+         +NP+H  ++PP M+  
Subjt:  HTPRRPPMVATEDYVGPGSNPKHTPRPPSMVATEDYVGPESNPKHTPGRPPMVTIEDYAGPGSNPKHTPRRPPMVATEDYSGLGSNPKH-TSRPPSMVAT

Query:  EDYVGPGSNPKHTPGRPPM
         DY  P +NP+H P +PPM
Subjt:  EDYVGPGSNPKHTPGRPPM

TrEMBL top hitse value%identityAlignment
A0A0E0DTA0 Uncharacterized protein5.8e-1436.55Show/hide
Query:  VATEDYASPGSNPKHTPRRPP--------MVA------TEDYVGPGSNPKHTPRPPSMVATEDYVGPESNPKHTPGRPPMVTIEDYAGPGSNPKHTPRRP
        V   DY +PG+NP+H P+RPP        MVA        DY  PG+NP+H P+ P         G E +   T      V + DY  PG+NP+H P+RP
Subjt:  VATEDYASPGSNPKHTPRRPP--------MVA------TEDYVGPGSNPKHTPRPPSMVATEDYVGPESNPKHTPGRPPMVTIEDYAGPGSNPKHTPRRP

Query:  PMVATEDYSGLGSNPKHTSRPPSMVATEDYVGPGSNPKHTPGRPP
        P        G     +  +   + V   DY GPG+NP+H P RPP
Subjt:  PMVATEDYSGLGSNPKHTSRPPSMVATEDYVGPGSNPKHTPGRPP

A0A4D6MDP1 Uncharacterized protein8.1e-2441.45Show/hide
Query:  EDYAGLGSNPKHTPRPPPMM----ATEDYAGPGSNPKHTPRRPPMVATEGYAGPRYNPKHTLLRPSMVATEDYASPGSNPKHTPRRPPMV----ATEDYV
        +DY G GSNPKH P PP  +      +DY G  SNPKH P  PP    + Y                   +DY   GSNPKH P  P  +      +DY 
Subjt:  EDYAGLGSNPKHTPRPPPMM----ATEDYAGPGSNPKHTPRRPPMVATEGYAGPRYNPKHTLLRPSMVATEDYASPGSNPKHTPRRPPMV----ATEDYV

Query:  GPGSNPKHTPRPPSM-----VATEDYVGPESNPKHTPGRPPMVT----IEDYAGPGSNPKHTPRRP----PMVATEDYSGLGSNPKHTSRPPS
        G G+NPKH P PPS         +DY G  SNPKH P  P  +     ++DYAG GSNPKH P  P         +DY G GSNPKH   PPS
Subjt:  GPGSNPKHTPRPPSM-----VATEDYVGPESNPKHTPGRPPMVT----IEDYAGPGSNPKHTPRRP----PMVATEDYSGLGSNPKHTSRPPS

A0A7J6FET4 Uncharacterized protein4.2e-2833.07Show/hide
Query:  SNPKHTPRRPPIVATEDYAGLGSNPKHTPRPPP-----MMATEDYAGPGSNPKH--TPRRPP---MVATEGYAGPRYNPKHTLLRPSM-----VATEDYA
        SNP  T  + P +  +DY  +G NP+H P  PP      ++ +DYA P  NP+H   P++P     ++ + YA P  NP+H    P M     +  +DY 
Subjt:  SNPKHTPRRPPIVATEDYAGLGSNPKHTPRPPP-----MMATEDYAGPGSNPKH--TPRRPP---MVATEGYAGPRYNPKHTLLRPSM-----VATEDYA

Query:  SPGSNPKHTPRRPPM-----VATEDYVGPGSNPKHTPRP-----PSMVATEDYVGPESNPKHTPGRPPMVT------IEDYAGPGSNPKHTPRRPPM---
          G NP+H P  PP+     ++ +DY  P  NP+H P P      + ++ +DY  P SNP+H    PP++T      ++DY   G NP+H P  PP+   
Subjt:  SPGSNPKHTPRRPPM-----VATEDYVGPGSNPKHTPRP-----PSMVATEDYVGPESNPKHTPGRPPMVT------IEDYAGPGSNPKHTPRRPPM---

Query:  --VATEDYSGLGSNPKHTSRP-----PSMVATEDYVGPGSNPKHTPGRPPM
          ++ +DY+    NP++   P      + ++ +DY  PGSNP+H    PPM
Subjt:  --VATEDYSGLGSNPKHTSRP-----PSMVATEDYVGPGSNPKHTPGRPPM

A0A7J6FEU1 Uncharacterized protein6.4e-2936.51Show/hide
Query:  GSNPKHTPRRPP-----IVATEDYAGLGSNPKHTPRPPPMMAT-------EDYAGPGSNPKHTPRRPPMVATEGYAGPRYNPKHTLLRPSMVATEDYASP
        G NP+H P  PP      ++ +DYA    NP+H  +PPP   T       +DYA PGSNP+H    PP++  E    P + P   L   + ++ +DYA+P
Subjt:  GSNPKHTPRRPP-----IVATEDYAGLGSNPKHTPRPPPMMAT-------EDYAGPGSNPKHTPRRPPMVATEGYAGPRYNPKHTLLRPSMVATEDYASP

Query:  GSNPKHTPRRPPMVAT-------EDYVGPGSNPKHTPRPPSM-----VATEDYVGPESNPKHTPGRPPM-----VTIEDYAGPGSNPKHTPRRPPMVAT-
          NP+H P  PP   T       +DYV PGSNP+H   PP M     +  +DY     NP+H P  PP+     ++++DYA P  NPK+ P  PP   T 
Subjt:  GSNPKHTPRRPPMVAT-------EDYVGPGSNPKHTPRPPSM-----VATEDYVGPESNPKHTPGRPPM-----VTIEDYAGPGSNPKHTPRRPPMVAT-

Query:  ------EDYSGLGSNPKHTSRPPSM-----VATEDYVGPGSNPKHTPGRPPM
              +DY+  GSNP+H   PP M     +  + Y   G NP+H P  PP+
Subjt:  ------EDYSGLGSNPKHTSRPPSM-----VATEDYVGPGSNPKHTPGRPPM

Q75KZ2 Uncharacterized protein5.0e-1334.93Show/hide
Query:  VATEDYASPGSNPKHTPRRPP--------MVA-------TEDYVGPGSNPKHTPRPPSMVATEDYVGPESNPKHTPGRPPMVTIEDYAGPGSNPKHTPRR
        V   DY +PG+NP+H P+RPP        MVA         DY  PG+NP+H P+ P         G E + +        V + DY  PG+NP+H P+R
Subjt:  VATEDYASPGSNPKHTPRRPP--------MVA-------TEDYVGPGSNPKHTPRPPSMVATEDYVGPESNPKHTPGRPPMVTIEDYAGPGSNPKHTPRR

Query:  PPMVATEDYSGLGSNPKHTSRPPSMVATEDYVGPGSNPKHTPGRPP
        PP        G   + +      + V   DY+ PG+NP+H P RPP
Subjt:  PPMVATEDYSGLGSNPKHTSRPPSMVATEDYVGPGSNPKHTPGRPP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GGGTCTAATCCAAAACACACACCACGGCGACCACCGATAGTGGCTACAGAAGACTACGCTGGTCTAGGGTCTAATCCAAAGCACACGCCGCGACCACCGCCGATGATGGC
TACAGAAGATTATGCTGGTCCAGGATCTAATCCAAAGCACACACCGCGGCGACCGCCGATGGTGGCTACAGAAGGCTACGCTGGTCCAAGGTATAATCCAAAGCACACAC
TACTGCGACCATCGATGGTGGCTACAGAAGACTATGCTAGTCCCGGGTCTAATCCAAAGCACACACCGCGGCGACCGCCGATGGTGGCTACAGAAGACTACGTTGGTCCA
GGGTCTAATCCAAAGCACACGCCACGACCACCGTCGATGGTGGCTACAGAAGATTACGTTGGTCCAGAGTCTAATCCAAAGCACACACCAGGACGACCACCGATGGTGAC
TATAGAAGACTATGCTGGTCCAGGGTCTAATCCAAAGCACACACCACGACGACCGCCGATGGTGGCTACAGAAGACTACTCTGGTCTAGGGTCTAATCCAAAGCACACGT
CACGACCACCGTCGATGGTGGCTACAGAAGATTACGTTGGTCCAGGGTCTAATCCAAAGCACACACCGGGACGACCACCGATG
mRNA sequenceShow/hide mRNA sequence
GGGTCTAATCCAAAACACACACCACGGCGACCACCGATAGTGGCTACAGAAGACTACGCTGGTCTAGGGTCTAATCCAAAGCACACGCCGCGACCACCGCCGATGATGGC
TACAGAAGATTATGCTGGTCCAGGATCTAATCCAAAGCACACACCGCGGCGACCGCCGATGGTGGCTACAGAAGGCTACGCTGGTCCAAGGTATAATCCAAAGCACACAC
TACTGCGACCATCGATGGTGGCTACAGAAGACTATGCTAGTCCCGGGTCTAATCCAAAGCACACACCGCGGCGACCGCCGATGGTGGCTACAGAAGACTACGTTGGTCCA
GGGTCTAATCCAAAGCACACGCCACGACCACCGTCGATGGTGGCTACAGAAGATTACGTTGGTCCAGAGTCTAATCCAAAGCACACACCAGGACGACCACCGATGGTGAC
TATAGAAGACTATGCTGGTCCAGGGTCTAATCCAAAGCACACACCACGACGACCGCCGATGGTGGCTACAGAAGACTACTCTGGTCTAGGGTCTAATCCAAAGCACACGT
CACGACCACCGTCGATGGTGGCTACAGAAGATTACGTTGGTCCAGGGTCTAATCCAAAGCACACACCGGGACGACCACCGATG
Protein sequenceShow/hide protein sequence
GSNPKHTPRRPPIVATEDYAGLGSNPKHTPRPPPMMATEDYAGPGSNPKHTPRRPPMVATEGYAGPRYNPKHTLLRPSMVATEDYASPGSNPKHTPRRPPMVATEDYVGP
GSNPKHTPRPPSMVATEDYVGPESNPKHTPGRPPMVTIEDYAGPGSNPKHTPRRPPMVATEDYSGLGSNPKHTSRPPSMVATEDYVGPGSNPKHTPGRPPM