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MS023595 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS023595
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProtein Ycf2
Genome locationscaffold155:108011..108124
RNA-Seq ExpressionMS023595
SyntenyMS023595
Gene Ontology termsGO:0009570 - chloroplast stroma (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0016887 - ATPase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ANO44735.1 hypothetical chloroplast protein RF21 [Calochortus albus]2.0e-1297.37Show/hide
Query:  RDCERCSTRNILVIASTHIPQKVDPALIAPNKLNTCIE
        RDCERCSTRNILVIASTHIPQKVDPALIAPNKLNTCI+
Subjt:  RDCERCSTRNILVIASTHIPQKVDPALIAPNKLNTCIE
QRI60548.1 hypothetical chloroplast RF21 [Hardenbergia violacea]2.0e-1297.37Show/hide
Query:  RDCERCSTRNILVIASTHIPQKVDPALIAPNKLNTCIE
        RDCERCSTRNILVIASTHIPQKVDPALIAPNKLNTCI+
Subjt:  RDCERCSTRNILVIASTHIPQKVDPALIAPNKLNTCIE
QWY89852.1 Ycf2 [Pouteria aningeri]2.0e-1297.37Show/hide
Query:  RDCERCSTRNILVIASTHIPQKVDPALIAPNKLNTCIE
        RDCERCSTRNILVIASTHIPQKVDPALIAPNKLNTCI+
Subjt:  RDCERCSTRNILVIASTHIPQKVDPALIAPNKLNTCIE
TAJ03986.1 AAA family ATPase [Marinilabiliaceae bacterium JC017]2.0e-1297.37Show/hide
Query:  RDCERCSTRNILVIASTHIPQKVDPALIAPNKLNTCIE
        RDCERCSTRNILVIASTHIPQKVDPALIAPNKLNTCI+
Subjt:  RDCERCSTRNILVIASTHIPQKVDPALIAPNKLNTCIE
YP_009771867.1 hypothetical chloroplast RF21 [Baphia racemosa]1.6e-1297.37Show/hide
Query:  RDCERCSTRNILVIASTHIPQKVDPALIAPNKLNTCIE
        RDCERCSTRNILVIASTHIPQKVDPALIAPNKLNTCI+
Subjt:  RDCERCSTRNILVIASTHIPQKVDPALIAPNKLNTCIE
TrEMBL top hitse value%identityAlignment
A0A0C5CHH1 Protein Ycf29.9e-1397.37Show/hide
Query:  RDCERCSTRNILVIASTHIPQKVDPALIAPNKLNTCIE
        RDCERCSTRNILVIASTHIPQKVDPALIAPNKLNTCI+
Subjt:  RDCERCSTRNILVIASTHIPQKVDPALIAPNKLNTCIE
A0A6H0DZW0 Protein Ycf29.9e-1397.37Show/hide
Query:  RDCERCSTRNILVIASTHIPQKVDPALIAPNKLNTCIE
        RDCERCSTRNILVIASTHIPQKVDPALIAPNKLNTCI+
Subjt:  RDCERCSTRNILVIASTHIPQKVDPALIAPNKLNTCIE
A0A6H0EJY2 Protein Ycf27.5e-1397.37Show/hide
Query:  RDCERCSTRNILVIASTHIPQKVDPALIAPNKLNTCIE
        RDCERCSTRNILVIASTHIPQKVDPALIAPNKLNTCI+
Subjt:  RDCERCSTRNILVIASTHIPQKVDPALIAPNKLNTCIE
A0A7H1A806 Protein Ycf29.9e-1397.37Show/hide
Query:  RDCERCSTRNILVIASTHIPQKVDPALIAPNKLNTCIE
        RDCERCSTRNILVIASTHIPQKVDPALIAPNKLNTCI+
Subjt:  RDCERCSTRNILVIASTHIPQKVDPALIAPNKLNTCIE
A0A7T2HD08 Uncharacterized protein9.9e-1397.37Show/hide
Query:  RDCERCSTRNILVIASTHIPQKVDPALIAPNKLNTCIE
        RDCERCSTRNILVIASTHIPQKVDPALIAPNKLNTCI+
Subjt:  RDCERCSTRNILVIASTHIPQKVDPALIAPNKLNTCIE
SwissProt top hitse value%identityAlignment
A4QJF8 Protein Ycf22.7e-1597.37Show/hide
Query:  RDCERCSTRNILVIASTHIPQKVDPALIAPNKLNTCIE
        RDCERCSTRNILVIASTHIPQKVDPALIAPNKLNTCI+
Subjt:  RDCERCSTRNILVIASTHIPQKVDPALIAPNKLNTCIE
A4QKX4 Protein Ycf2 A2.7e-1597.37Show/hide
Query:  RDCERCSTRNILVIASTHIPQKVDPALIAPNKLNTCIE
        RDCERCSTRNILVIASTHIPQKVDPALIAPNKLNTCI+
Subjt:  RDCERCSTRNILVIASTHIPQKVDPALIAPNKLNTCIE
A4QKZ7 Protein Ycf2 B2.7e-1597.37Show/hide
Query:  RDCERCSTRNILVIASTHIPQKVDPALIAPNKLNTCIE
        RDCERCSTRNILVIASTHIPQKVDPALIAPNKLNTCI+
Subjt:  RDCERCSTRNILVIASTHIPQKVDPALIAPNKLNTCIE
Q8S8U1 Protein Ycf2 B2.7e-1597.37Show/hide
Query:  RDCERCSTRNILVIASTHIPQKVDPALIAPNKLNTCIE
        RDCERCSTRNILVIASTHIPQKVDPALIAPNKLNTCI+
Subjt:  RDCERCSTRNILVIASTHIPQKVDPALIAPNKLNTCIE
Q8S8V2 Protein Ycf2 A2.7e-1597.37Show/hide
Query:  RDCERCSTRNILVIASTHIPQKVDPALIAPNKLNTCIE
        RDCERCSTRNILVIASTHIPQKVDPALIAPNKLNTCI+
Subjt:  RDCERCSTRNILVIASTHIPQKVDPALIAPNKLNTCIE
Arabidopsis top hitse value%identityAlignment
ATCG00860.1 Chloroplast Ycf2;ATPase, AAA type, core1.9e-1697.37Show/hide
Query:  RDCERCSTRNILVIASTHIPQKVDPALIAPNKLNTCIE
        RDCERCSTRNILVIASTHIPQKVDPALIAPNKLNTCI+
Subjt:  RDCERCSTRNILVIASTHIPQKVDPALIAPNKLNTCIE
ATCG01280.1 Chloroplast Ycf2;ATPase, AAA type, core1.9e-1697.37Show/hide
Query:  RDCERCSTRNILVIASTHIPQKVDPALIAPNKLNTCIE
        RDCERCSTRNILVIASTHIPQKVDPALIAPNKLNTCI+
Subjt:  RDCERCSTRNILVIASTHIPQKVDPALIAPNKLNTCIE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGGGATTGTGAAAGATGTTCCACTAGAAATATTCTTGTTATTGCTTCGACCCATATTCCCCAAAAAGTGGATCCCGCTCTAATAGCTCCGAATAAATTAAATACATGCAT
TGAA
mRNA sequenceShow/hide mRNA sequence
AGGGATTGTGAAAGATGTTCCACTAGAAATATTCTTGTTATTGCTTCGACCCATATTCCCCAAAAAGTGGATCCCGCTCTAATAGCTCCGAATAAATTAAATACATGCAT
TGAA
Protein sequenceShow/hide protein sequence
RDCERCSTRNILVIASTHIPQKVDPALIAPNKLNTCIE