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MS023607 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS023607
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRab-GAP TBC domain-containing protein
Genome locationscaffold155:537953..538054
RNA-Seq ExpressionMS023607
SyntenyMS023607
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8646264.1 hypothetical protein Csa_015531 [Cucumis sativus]6.5e-1094.12Show/hide
Query:  LQPGKTLSARRWDAAFSKDGHLDIAKVLRRIHRG
        ++PGKTLSARRWDAAFSKDGHLDIAKVLRRIHRG
Subjt:  LQPGKTLSARRWDAAFSKDGHLDIAKVLRRIHRG

KAG7025437.1 TBC1 domain family member 15 [Cucurbita argyrosperma subsp. argyrosperma]6.5e-1094.12Show/hide
Query:  LQPGKTLSARRWDAAFSKDGHLDIAKVLRRIHRG
        ++PGKTLSARRWDAAFSKDGHLDIAKVLRRIHRG
Subjt:  LQPGKTLSARRWDAAFSKDGHLDIAKVLRRIHRG

XP_016902206.1 PREDICTED: TBC1 domain family member 15-like [Cucumis melo]6.5e-1094.12Show/hide
Query:  LQPGKTLSARRWDAAFSKDGHLDIAKVLRRIHRG
        ++PGKTLSARRWDAAFSKDGHLDIAKVLRRIHRG
Subjt:  LQPGKTLSARRWDAAFSKDGHLDIAKVLRRIHRG

XP_023004186.1 TBC1 domain family member 15-like isoform X1 [Cucurbita maxima]6.5e-1094.12Show/hide
Query:  LQPGKTLSARRWDAAFSKDGHLDIAKVLRRIHRG
        ++PGKTLSARRWDAAFSKDGHLDIAKVLRRIHRG
Subjt:  LQPGKTLSARRWDAAFSKDGHLDIAKVLRRIHRG

XP_023004188.1 TBC1 domain family member 15-like isoform X2 [Cucurbita maxima]6.5e-1094.12Show/hide
Query:  LQPGKTLSARRWDAAFSKDGHLDIAKVLRRIHRG
        ++PGKTLSARRWDAAFSKDGHLDIAKVLRRIHRG
Subjt:  LQPGKTLSARRWDAAFSKDGHLDIAKVLRRIHRG

TrEMBL top hitse value%identityAlignment
A0A5A7SLF0 TBC1 domain family member 15-like3.1e-1094.12Show/hide
Query:  LQPGKTLSARRWDAAFSKDGHLDIAKVLRRIHRG
        ++PGKTLSARRWDAAFSKDGHLDIAKVLRRIHRG
Subjt:  LQPGKTLSARRWDAAFSKDGHLDIAKVLRRIHRG

A0A6J1DRH9 TBC1 domain family member 15-like isoform X13.1e-1094.12Show/hide
Query:  LQPGKTLSARRWDAAFSKDGHLDIAKVLRRIHRG
        ++PGKTLSARRWDAAFSKDGHLDIAKVLRRIHRG
Subjt:  LQPGKTLSARRWDAAFSKDGHLDIAKVLRRIHRG

A0A6J1H5Z9 TBC1 domain family member 15-like isoform X13.1e-1094.12Show/hide
Query:  LQPGKTLSARRWDAAFSKDGHLDIAKVLRRIHRG
        ++PGKTLSARRWDAAFSKDGHLDIAKVLRRIHRG
Subjt:  LQPGKTLSARRWDAAFSKDGHLDIAKVLRRIHRG

A0A6J1KRE4 TBC1 domain family member 15-like isoform X13.1e-1094.12Show/hide
Query:  LQPGKTLSARRWDAAFSKDGHLDIAKVLRRIHRG
        ++PGKTLSARRWDAAFSKDGHLDIAKVLRRIHRG
Subjt:  LQPGKTLSARRWDAAFSKDGHLDIAKVLRRIHRG

A0A6J1KYQ9 TBC1 domain family member 15-like isoform X23.1e-1094.12Show/hide
Query:  LQPGKTLSARRWDAAFSKDGHLDIAKVLRRIHRG
        ++PGKTLSARRWDAAFSKDGHLDIAKVLRRIHRG
Subjt:  LQPGKTLSARRWDAAFSKDGHLDIAKVLRRIHRG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G20440.1 Ypt/Rab-GAP domain of gyp1p superfamily protein4.5e-0980.65Show/hide
Query:  GKTLSARRWDAAFSKDGHLDIAKVLRRIHRG
        GKTLSARRW AAF++DGHLD+ KVLRRI RG
Subjt:  GKTLSARRWDAAFSKDGHLDIAKVLRRIHRG

AT2G20440.2 Ypt/Rab-GAP domain of gyp1p superfamily protein4.5e-0980.65Show/hide
Query:  GKTLSARRWDAAFSKDGHLDIAKVLRRIHRG
        GKTLSARRW AAF++DGHLD+ KVLRRI RG
Subjt:  GKTLSARRWDAAFSKDGHLDIAKVLRRIHRG

AT4G27100.1 Ypt/Rab-GAP domain of gyp1p superfamily protein1.2e-0658.82Show/hide
Query:  LQPGKTLSARRWDAAFSKDGHLDIAKVLRRIHRG
        ++PGKTLS R+W A F ++G L I K LRRI RG
Subjt:  LQPGKTLSARRWDAAFSKDGHLDIAKVLRRIHRG

AT4G28550.1 Ypt/Rab-GAP domain of gyp1p superfamily protein4.9e-0874.19Show/hide
Query:  GKTLSARRWDAAFSKDGHLDIAKVLRRIHRG
        GKTLSAR+W AAF+ DGHLD+ +VLRRI RG
Subjt:  GKTLSARRWDAAFSKDGHLDIAKVLRRIHRG

AT5G54780.1 Ypt/Rab-GAP domain of gyp1p superfamily protein2.5e-0761.76Show/hide
Query:  LQPGKTLSARRWDAAFSKDGHLDIAKVLRRIHRG
        ++PGKTLS R+W AAF+ +G LDI K L RI RG
Subjt:  LQPGKTLSARRWDAAFSKDGHLDIAKVLRRIHRG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTGCAGCCGGGGAAGACTCTAAGTGCAAGAAGATGGGATGCAGCATTTTCTAAAGATGGTCATTTGGATATAGCTAAAGTGCTAAGACGAATTCACCGTGGG
mRNA sequenceShow/hide mRNA sequence
CTGCAGCCGGGGAAGACTCTAAGTGCAAGAAGATGGGATGCAGCATTTTCTAAAGATGGTCATTTGGATATAGCTAAAGTGCTAAGACGAATTCACCGTGGG
Protein sequenceShow/hide protein sequence
LQPGKTLSARRWDAAFSKDGHLDIAKVLRRIHRG