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MS023612 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS023612
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionzf-RVT domain-containing protein
Genome locationscaffold155:606444..606736
RNA-Seq ExpressionMS023612
SyntenyMS023612
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032390.1 uncharacterized protein E6C27_scaffold219G002650 [Cucumis melo var. makuwa]4.0e-0437.35Show/hide
Query:  SINTSDRIQRKFTNWSPSPPIFRICLGQKS--PHLFILCPFVNWWYR-LLRVFDVSSYLHICIDSWLIEGFDGFSFKKKAKML
        S+N  +++QRKF N S SP  + +CL +     HLF+ C F +     LL  F + S     ID W+++G +G SF  K K+L
Subjt:  SINTSDRIQRKFTNWSPSPPIFRICLGQKS--PHLFILCPFVNWWYR-LLRVFDVSSYLHICIDSWLIEGFDGFSFKKKAKML

KAA0056469.1 uncharacterized protein E6C27_scaffold186G002430 [Cucumis melo var. makuwa]2.3e-0438.27Show/hide
Query:  SINTSDRIQRKFTNWSPSPPIFRICLGQKS--PHLFILCPFVN-WWYRLLRVFDVSSYLHICIDSWLIEGFDGFSFKKKAK
        S+NT +++QRKF   S S  +  +CL +K    HLF+ C   +  W     +F V SYL   ID W++EG DG  F  + K
Subjt:  SINTSDRIQRKFTNWSPSPPIFRICLGQKS--PHLFILCPFVN-WWYRLLRVFDVSSYLHICIDSWLIEGFDGFSFKKKAK

TYK31299.1 protein FAM91A1 [Cucumis melo var. makuwa]4.0e-0438.1Show/hide
Query:  LCYGSINTSDRIQRKFTNWSPSPPIFRICL--GQKSPHLFILCPFV-NWWYRLLRVFDVSSYLHICIDSWLIEGFDGFSFKKKA
        L Y S+N  +++QRKF N S SP I  +CL   +   HLF+ C F    W R+  +F +   L   ID  + +G  G SF  KA
Subjt:  LCYGSINTSDRIQRKFTNWSPSPPIFRICL--GQKSPHLFILCPFV-NWWYRLLRVFDVSSYLHICIDSWLIEGFDGFSFKKKA

TrEMBL top hitse value%identityAlignment
A0A5A7SNM9 Uncharacterized protein1.9e-0437.35Show/hide
Query:  SINTSDRIQRKFTNWSPSPPIFRICLGQKS--PHLFILCPFVNWWYR-LLRVFDVSSYLHICIDSWLIEGFDGFSFKKKAKML
        S+N  +++QRKF N S SP  + +CL +     HLF+ C F +     LL  F + S     ID W+++G +G SF  K K+L
Subjt:  SINTSDRIQRKFTNWSPSPPIFRICLGQKS--PHLFILCPFVNWWYR-LLRVFDVSSYLHICIDSWLIEGFDGFSFKKKAKML

A0A5D3E019 zf-RVT domain-containing protein1.1e-0438.27Show/hide
Query:  SINTSDRIQRKFTNWSPSPPIFRICLGQKS--PHLFILCPFVN-WWYRLLRVFDVSSYLHICIDSWLIEGFDGFSFKKKAK
        S+NT +++QRKF   S S  +  +CL +K    HLF+ C   +  W     +F V SYL   ID W++EG DG  F  + K
Subjt:  SINTSDRIQRKFTNWSPSPPIFRICLGQKS--PHLFILCPFVN-WWYRLLRVFDVSSYLHICIDSWLIEGFDGFSFKKKAK

A0A5D3E632 Protein FAM91A11.9e-0438.1Show/hide
Query:  LCYGSINTSDRIQRKFTNWSPSPPIFRICL--GQKSPHLFILCPFV-NWWYRLLRVFDVSSYLHICIDSWLIEGFDGFSFKKKA
        L Y S+N  +++QRKF N S SP I  +CL   +   HLF+ C F    W R+  +F +   L   ID  + +G  G SF  KA
Subjt:  LCYGSINTSDRIQRKFTNWSPSPPIFRICL--GQKSPHLFILCPFV-NWWYRLLRVFDVSSYLHICIDSWLIEGFDGFSFKKKA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTTCAGAAAGTTCAAATTATTCTTTGCTATGGAAGTATAAACACTTCAGATAGAATTCAAAGAAAGTTTACAAATTGGTCCCCCTCCCCTCCCATTTTCAGAATATGTTT
AGGTCAGAAGAGCCCCCATCTTTTTATTCTCTGCCCATTTGTGAATTGGTGGTATCGTCTCCTACGTGTGTTTGATGTTTCGAGCTACCTGCATATTTGCATTGACAGCT
GGTTGATTGAAGGTTTTGATGGGTTTTCGTTTAAGAAAAAAGCGAAAATGCTTTGGAATTGTGTCTTTAGA
mRNA sequenceShow/hide mRNA sequence
CTTCAGAAAGTTCAAATTATTCTTTGCTATGGAAGTATAAACACTTCAGATAGAATTCAAAGAAAGTTTACAAATTGGTCCCCCTCCCCTCCCATTTTCAGAATATGTTT
AGGTCAGAAGAGCCCCCATCTTTTTATTCTCTGCCCATTTGTGAATTGGTGGTATCGTCTCCTACGTGTGTTTGATGTTTCGAGCTACCTGCATATTTGCATTGACAGCT
GGTTGATTGAAGGTTTTGATGGGTTTTCGTTTAAGAAAAAAGCGAAAATGCTTTGGAATTGTGTCTTTAGA
Protein sequenceShow/hide protein sequence
LQKVQIILCYGSINTSDRIQRKFTNWSPSPPIFRICLGQKSPHLFILCPFVNWWYRLLRVFDVSSYLHICIDSWLIEGFDGFSFKKKAKMLWNCVFR