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MS023626 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS023626
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold155:772197..774874
RNA-Seq ExpressionMS023626
SyntenyMS023626
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022141895.1 uncharacterized protein LOC111012146 isoform X1 [Momordica charantia]8.9e-59100Show/hide
Query:  MDSNGCRASKRLLFDRRYGWVIDEWRNPSHEALAGGRGMFCIVPLAKTLVSSVSQMVNVAATSTVKALEKPELLSPQVLQAGLHERLEKFLGGLQKANSP
        MDSNGCRASKRLLFDRRYGWVIDEWRNPSHEALAGGRGMFCIVPLAKTLVSSVSQMVNVAATSTVKALEKPELLSPQVLQAGLHERLEKFLGGLQKANSP
Subjt:  MDSNGCRASKRLLFDRRYGWVIDEWRNPSHEALAGGRGMFCIVPLAKTLVSSVSQMVNVAATSTVKALEKPELLSPQVLQAGLHERLEKFLGGLQKANSP

Query:  SLPTTLHLHDERMDRR
        SLPTTLHLHDERMDRR
Subjt:  SLPTTLHLHDERMDRR

XP_022141897.1 uncharacterized protein LOC111012146 isoform X2 [Momordica charantia]7.3e-45100Show/hide
Query:  IDEWRNPSHEALAGGRGMFCIVPLAKTLVSSVSQMVNVAATSTVKALEKPELLSPQVLQAGLHERLEKFLGGLQKANSPSLPTTLHLHDERMDRR
        IDEWRNPSHEALAGGRGMFCIVPLAKTLVSSVSQMVNVAATSTVKALEKPELLSPQVLQAGLHERLEKFLGGLQKANSPSLPTTLHLHDERMDRR
Subjt:  IDEWRNPSHEALAGGRGMFCIVPLAKTLVSSVSQMVNVAATSTVKALEKPELLSPQVLQAGLHERLEKFLGGLQKANSPSLPTTLHLHDERMDRR

XP_022925399.1 uncharacterized protein LOC111432700 [Cucurbita moschata]1.4e-4072.36Show/hide
Query:  DSNGCRASKRLLFDRRYGWVIDEWRNPSHEALAGGRGMFCIVPLAKTLVSSVSQMVNVAATSTVKALEKPELLSPQVLQAGLHERLEKFLGGLQ------
        +S  C  S+RLLFDRRYGWVIDEW+NPS EALAGGRGMFCI PLAKTLV+SV+QMVN+AATSTVKALE PELLSPQVLQAGLH+RLEKF+  +Q      
Subjt:  DSNGCRASKRLLFDRRYGWVIDEWRNPSHEALAGGRGMFCIVPLAKTLVSSVSQMVNVAATSTVKALEKPELLSPQVLQAGLHERLEKFLGGLQ------

Query:  ---KANSPSLPT-TLHLHDERMD
           K  SPS+PT +LHL DER+D
Subjt:  ---KANSPSLPT-TLHLHDERMD

XP_022973473.1 uncharacterized protein LOC111472022 [Cucurbita maxima]4.1e-4072.36Show/hide
Query:  DSNGCRASKRLLFDRRYGWVIDEWRNPSHEALAGGRGMFCIVPLAKTLVSSVSQMVNVAATSTVKALEKPELLSPQVLQAGLHERLEKFLG---------
        +S  C  SKRLLFDRRYGWVIDEW+NPS EALAGGRGMFCI PLAKTLV+SV+QMVN+AATSTVKALE PELLSPQVLQAGLH+RLEKF+          
Subjt:  DSNGCRASKRLLFDRRYGWVIDEWRNPSHEALAGGRGMFCIVPLAKTLVSSVSQMVNVAATSTVKALEKPELLSPQVLQAGLHERLEKFLG---------

Query:  GLQKANSPSLPT-TLHLHDERMD
        GL +  SPS+PT +LHL DE +D
Subjt:  GLQKANSPSLPT-TLHLHDERMD

XP_038889417.1 uncharacterized protein LOC120079329 isoform X1 [Benincasa hispida]4.1e-4072.36Show/hide
Query:  DSNGCRASKRLLFDRRYGWVIDEWRNPSHEALAGGRGMFCIVPLAKTLVSSVSQMVNVAATSTVKALEKPELLSPQVLQAGLHERLEKFLG---------
        +S  C  SKRLLFDRRYGWVIDEW++PS EALAGGRGMFCIVPLAKTLV+SV+QMVN+AA STVKALE PELLSPQVLQ GLH+RLEKF           
Subjt:  DSNGCRASKRLLFDRRYGWVIDEWRNPSHEALAGGRGMFCIVPLAKTLVSSVSQMVNVAATSTVKALEKPELLSPQVLQAGLHERLEKFLG---------

Query:  GLQKANSPSLPT-TLHLHDERMD
        G QK  SPS+ T +LHLHDER+D
Subjt:  GLQKANSPSLPT-TLHLHDERMD

TrEMBL top hitse value%identityAlignment
A0A6J1CJD7 uncharacterized protein LOC111012146 isoform X14.3e-59100Show/hide
Query:  MDSNGCRASKRLLFDRRYGWVIDEWRNPSHEALAGGRGMFCIVPLAKTLVSSVSQMVNVAATSTVKALEKPELLSPQVLQAGLHERLEKFLGGLQKANSP
        MDSNGCRASKRLLFDRRYGWVIDEWRNPSHEALAGGRGMFCIVPLAKTLVSSVSQMVNVAATSTVKALEKPELLSPQVLQAGLHERLEKFLGGLQKANSP
Subjt:  MDSNGCRASKRLLFDRRYGWVIDEWRNPSHEALAGGRGMFCIVPLAKTLVSSVSQMVNVAATSTVKALEKPELLSPQVLQAGLHERLEKFLGGLQKANSP

Query:  SLPTTLHLHDERMDRR
        SLPTTLHLHDERMDRR
Subjt:  SLPTTLHLHDERMDRR

A0A6J1CL49 uncharacterized protein LOC111012146 isoform X23.5e-45100Show/hide
Query:  IDEWRNPSHEALAGGRGMFCIVPLAKTLVSSVSQMVNVAATSTVKALEKPELLSPQVLQAGLHERLEKFLGGLQKANSPSLPTTLHLHDERMDRR
        IDEWRNPSHEALAGGRGMFCIVPLAKTLVSSVSQMVNVAATSTVKALEKPELLSPQVLQAGLHERLEKFLGGLQKANSPSLPTTLHLHDERMDRR
Subjt:  IDEWRNPSHEALAGGRGMFCIVPLAKTLVSSVSQMVNVAATSTVKALEKPELLSPQVLQAGLHERLEKFLGGLQKANSPSLPTTLHLHDERMDRR

A0A6J1EC20 uncharacterized protein LOC1114327006.9e-4172.36Show/hide
Query:  DSNGCRASKRLLFDRRYGWVIDEWRNPSHEALAGGRGMFCIVPLAKTLVSSVSQMVNVAATSTVKALEKPELLSPQVLQAGLHERLEKFLGGLQ------
        +S  C  S+RLLFDRRYGWVIDEW+NPS EALAGGRGMFCI PLAKTLV+SV+QMVN+AATSTVKALE PELLSPQVLQAGLH+RLEKF+  +Q      
Subjt:  DSNGCRASKRLLFDRRYGWVIDEWRNPSHEALAGGRGMFCIVPLAKTLVSSVSQMVNVAATSTVKALEKPELLSPQVLQAGLHERLEKFLGGLQ------

Query:  ---KANSPSLPT-TLHLHDERMD
           K  SPS+PT +LHL DER+D
Subjt:  ---KANSPSLPT-TLHLHDERMD

A0A6J1IB95 uncharacterized protein LOC111471949 isoform X27.6e-4074.19Show/hide
Query:  MDSNGCRASKRLLFDRRYGWVIDEWRNPSHEALAGGRGMFCIVPLAKTLVSSVSQMVNVAATSTVKALEKPELLSPQVLQAGLHERLEKFL---------
        MD N    SKRLLFDRRYGWVIDEW++P+ EALAGGRGMFCIVPLAKTLV+SV+QM N+AATS VKALEKPELLSPQVLQAGLHER+EKF+         
Subjt:  MDSNGCRASKRLLFDRRYGWVIDEWRNPSHEALAGGRGMFCIVPLAKTLVSSVSQMVNVAATSTVKALEKPELLSPQVLQAGLHERLEKFL---------

Query:  GGLQKANSPSLPT-TLHLHDERMD
         GLQK NSPS  T +L LHDERMD
Subjt:  GGLQKANSPSLPT-TLHLHDERMD

A0A6J1ID54 uncharacterized protein LOC1114720222.0e-4072.36Show/hide
Query:  DSNGCRASKRLLFDRRYGWVIDEWRNPSHEALAGGRGMFCIVPLAKTLVSSVSQMVNVAATSTVKALEKPELLSPQVLQAGLHERLEKFLG---------
        +S  C  SKRLLFDRRYGWVIDEW+NPS EALAGGRGMFCI PLAKTLV+SV+QMVN+AATSTVKALE PELLSPQVLQAGLH+RLEKF+          
Subjt:  DSNGCRASKRLLFDRRYGWVIDEWRNPSHEALAGGRGMFCIVPLAKTLVSSVSQMVNVAATSTVKALEKPELLSPQVLQAGLHERLEKFLG---------

Query:  GLQKANSPSLPT-TLHLHDERMD
        GL +  SPS+PT +LHL DE +D
Subjt:  GLQKANSPSLPT-TLHLHDERMD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G21195.1 unknown protein5.6e-1972.22Show/hide
Query:  RASKRLLFDRRYGWVIDEWRNPSHEALAGGRGMFCIVPLAKTLVSSVSQMVNVA
        R+S+RLLFDRRYGWV+DEW++PS EALAGGRGMFC+VPL KTL  + SQ +N A
Subjt:  RASKRLLFDRRYGWVIDEWRNPSHEALAGGRGMFCIVPLAKTLVSSVSQMVNVA

AT2G21195.2 unknown protein8.1e-1052.08Show/hide
Query:  IDEWRNPSHEALAGGRGMFCIVPLAKTLVSSVSQMVNVAATSTVKALE
        +DEW++PS EALAGGRGMFC+VPL KTL  + SQ V+    +++++ +
Subjt:  IDEWRNPSHEALAGGRGMFCIVPLAKTLVSSVSQMVNVAATSTVKALE

AT2G21195.3 unknown protein4.7e-1066.67Show/hide
Query:  IDEWRNPSHEALAGGRGMFCIVPLAKTLVSSVSQMVNVA
        +DEW++PS EALAGGRGMFC+VPL KTL  + SQ +N A
Subjt:  IDEWRNPSHEALAGGRGMFCIVPLAKTLVSSVSQMVNVA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTCCAACGGATGCAGAGCCTCAAAACGCCTTCTCTTCGACCGCCGCTACGGTTGGGTGATTGATGAATGGAGAAACCCTTCCCACGAAGCTCTAGCCGGTGGCCG
AGGAATGTTTTGCATAGTGCCCCTGGCGAAAACTCTGGTTAGCTCAGTCTCACAGATGGTTAACGTTGCAGCAACATCCACCGTTAAAGCTCTTGAAAAGCCGGAGCTTC
TTTCACCTCAGGTACTACAAGCTGGTCTCCATGAAAGGCTTGAGAAGTTCCTCGGTGGCTTGCAGAAAGCAAATTCTCCTTCCCTTCCCACTACATTGCATCTACATGAT
GAAAGAATGGATCGCAGA
mRNA sequenceShow/hide mRNA sequence
ATGGATTCCAACGGATGCAGAGCCTCAAAACGCCTTCTCTTCGACCGCCGCTACGGTTGGGTGATTGATGAATGGAGAAACCCTTCCCACGAAGCTCTAGCCGGTGGCCG
AGGAATGTTTTGCATAGTGCCCCTGGCGAAAACTCTGGTTAGCTCAGTCTCACAGATGGTTAACGTTGCAGCAACATCCACCGTTAAAGCTCTTGAAAAGCCGGAGCTTC
TTTCACCTCAGGTACTACAAGCTGGTCTCCATGAAAGGCTTGAGAAGTTCCTCGGTGGCTTGCAGAAAGCAAATTCTCCTTCCCTTCCCACTACATTGCATCTACATGAT
GAAAGAATGGATCGCAGA
Protein sequenceShow/hide protein sequence
MDSNGCRASKRLLFDRRYGWVIDEWRNPSHEALAGGRGMFCIVPLAKTLVSSVSQMVNVAATSTVKALEKPELLSPQVLQAGLHERLEKFLGGLQKANSPSLPTTLHLHD
ERMDRR