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MS023659 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS023659
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptioncalmodulin-like protein 3
Genome locationscaffold570:102250..102501
RNA-Seq ExpressionMS023659
SyntenyMS023659
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044599.1 calmodulin-like protein 3 [Cucumis melo var. makuwa]4.5e-3695.24Show/hide
Query:  KSIMEERDEEEDMREAFNVFDQNGDGFITVDELRSVLASLGLKQGRSAEDCKKMIMKVDVDGDGMVNYKEFKQMMKGGGFSALG
        +SIM+ERDEEEDMREAFNVFDQNGDGFITVDELRSVLASLGLKQGR+ EDCKKMIMKVDVDGDGMVNYKEFKQMMKGGGFSALG
Subjt:  KSIMEERDEEEDMREAFNVFDQNGDGFITVDELRSVLASLGLKQGRSAEDCKKMIMKVDVDGDGMVNYKEFKQMMKGGGFSALG

XP_004152098.1 calmodulin-like protein 3 [Cucumis sativus]4.5e-3695.24Show/hide
Query:  KSIMEERDEEEDMREAFNVFDQNGDGFITVDELRSVLASLGLKQGRSAEDCKKMIMKVDVDGDGMVNYKEFKQMMKGGGFSALG
        +SIM+ERDEEEDMREAFNVFDQNGDGFITVDELRSVLASLGLKQGR+ EDCKKMIMKVDVDGDGMVNYKEFKQMMKGGGFSALG
Subjt:  KSIMEERDEEEDMREAFNVFDQNGDGFITVDELRSVLASLGLKQGRSAEDCKKMIMKVDVDGDGMVNYKEFKQMMKGGGFSALG

XP_022979973.1 calmodulin-like protein 3 [Cucurbita maxima]1.0e-3594.05Show/hide
Query:  KSIMEERDEEEDMREAFNVFDQNGDGFITVDELRSVLASLGLKQGRSAEDCKKMIMKVDVDGDGMVNYKEFKQMMKGGGFSALG
        +SIM+E+DEEEDMREAFNVFDQNGDGFITVDELRSVLASLGLKQGR+ EDCKKMIMKVDVDGDGMVNYKEFKQMMKGGGFSALG
Subjt:  KSIMEERDEEEDMREAFNVFDQNGDGFITVDELRSVLASLGLKQGRSAEDCKKMIMKVDVDGDGMVNYKEFKQMMKGGGFSALG

XP_023526445.1 calmodulin-like protein 3 [Cucurbita pepo subsp. pepo]1.0e-3594.05Show/hide
Query:  KSIMEERDEEEDMREAFNVFDQNGDGFITVDELRSVLASLGLKQGRSAEDCKKMIMKVDVDGDGMVNYKEFKQMMKGGGFSALG
        +SIM+E+DEEEDMREAFNVFDQNGDGFITVDELRSVLASLGLKQGR+ EDCKKMIMKVDVDGDGMVNYKEFKQMMKGGGFSALG
Subjt:  KSIMEERDEEEDMREAFNVFDQNGDGFITVDELRSVLASLGLKQGRSAEDCKKMIMKVDVDGDGMVNYKEFKQMMKGGGFSALG

XP_023890833.1 calmodulin-like protein 3 [Quercus suber]1.0e-3594.05Show/hide
Query:  KSIMEERDEEEDMREAFNVFDQNGDGFITVDELRSVLASLGLKQGRSAEDCKKMIMKVDVDGDGMVNYKEFKQMMKGGGFSALG
        +SIM+ERDEEEDM+EAFNVFDQNGDGFITVDELRSVLASLGLKQGR+ EDCKKMIMKVDVDGDGMVNYKEFKQMMKGGGFSALG
Subjt:  KSIMEERDEEEDMREAFNVFDQNGDGFITVDELRSVLASLGLKQGRSAEDCKKMIMKVDVDGDGMVNYKEFKQMMKGGGFSALG

TrEMBL top hitse value%identityAlignment
A0A1S3BXJ7 calmodulin-like protein 32.2e-3695.24Show/hide
Query:  KSIMEERDEEEDMREAFNVFDQNGDGFITVDELRSVLASLGLKQGRSAEDCKKMIMKVDVDGDGMVNYKEFKQMMKGGGFSALG
        +SIM+ERDEEEDMREAFNVFDQNGDGFITVDELRSVLASLGLKQGR+ EDCKKMIMKVDVDGDGMVNYKEFKQMMKGGGFSALG
Subjt:  KSIMEERDEEEDMREAFNVFDQNGDGFITVDELRSVLASLGLKQGRSAEDCKKMIMKVDVDGDGMVNYKEFKQMMKGGGFSALG

A0A5D3CZN0 Calmodulin-like protein 32.2e-3695.24Show/hide
Query:  KSIMEERDEEEDMREAFNVFDQNGDGFITVDELRSVLASLGLKQGRSAEDCKKMIMKVDVDGDGMVNYKEFKQMMKGGGFSALG
        +SIM+ERDEEEDMREAFNVFDQNGDGFITVDELRSVLASLGLKQGR+ EDCKKMIMKVDVDGDGMVNYKEFKQMMKGGGFSALG
Subjt:  KSIMEERDEEEDMREAFNVFDQNGDGFITVDELRSVLASLGLKQGRSAEDCKKMIMKVDVDGDGMVNYKEFKQMMKGGGFSALG

A0A6J1IXV3 calmodulin-like protein 34.8e-3694.05Show/hide
Query:  KSIMEERDEEEDMREAFNVFDQNGDGFITVDELRSVLASLGLKQGRSAEDCKKMIMKVDVDGDGMVNYKEFKQMMKGGGFSALG
        +SIM+E+DEEEDMREAFNVFDQNGDGFITVDELRSVLASLGLKQGR+ EDCKKMIMKVDVDGDGMVNYKEFKQMMKGGGFSALG
Subjt:  KSIMEERDEEEDMREAFNVFDQNGDGFITVDELRSVLASLGLKQGRSAEDCKKMIMKVDVDGDGMVNYKEFKQMMKGGGFSALG

A0A7N2MS21 Uncharacterized protein4.8e-3694.05Show/hide
Query:  KSIMEERDEEEDMREAFNVFDQNGDGFITVDELRSVLASLGLKQGRSAEDCKKMIMKVDVDGDGMVNYKEFKQMMKGGGFSALG
        +SIM+ERDEEEDM+EAFNVFDQNGDGFITVDELRSVLASLGLKQGR+ EDCKKMIMKVDVDGDGMVNYKEFKQMMKGGGFSALG
Subjt:  KSIMEERDEEEDMREAFNVFDQNGDGFITVDELRSVLASLGLKQGRSAEDCKKMIMKVDVDGDGMVNYKEFKQMMKGGGFSALG

D1MWZ5 Calcium-binding EF-hand protein2.2e-3695.24Show/hide
Query:  KSIMEERDEEEDMREAFNVFDQNGDGFITVDELRSVLASLGLKQGRSAEDCKKMIMKVDVDGDGMVNYKEFKQMMKGGGFSALG
        +SIM+ERDEEEDMREAFNVFDQNGDGFITVDELRSVLASLGLKQGR+ EDCKKMIMKVDVDGDGMVNYKEFKQMMKGGGFSALG
Subjt:  KSIMEERDEEEDMREAFNVFDQNGDGFITVDELRSVLASLGLKQGRSAEDCKKMIMKVDVDGDGMVNYKEFKQMMKGGGFSALG

SwissProt top hitse value%identityAlignment
O22845 Calmodulin-like protein 51.0e-2778.38Show/hide
Query:  EEEDMREAFNVFDQNGDGFITVDELRSVLASLGLKQGRSAEDCKKMIMKVDVDGDGMVNYKEFKQMMKGGGFSA
        EEEDM++AFNVFDQ+GDGFITV+EL+SV+ASLGLKQG++ + CKKMIM+VD DGDG VNYKEF QMMKGGGFS+
Subjt:  EEEDMREAFNVFDQNGDGFITVDELRSVLASLGLKQGRSAEDCKKMIMKVDVDGDGMVNYKEFKQMMKGGGFSA

Q2QVI1 Probable calcium-binding protein CML283.2e-2979.22Show/hide
Query:  DEEEDMREAFNVFDQNGDGFITVDELRSVLASLGLKQGRSAEDCKKMIMKVDVDGDGMVNYKEFKQMMKGGGFSALG
        DE+E MREAFNVFDQNGDGFITVDELRSVL+SLGLK GR+A+DC++MI  VD DGDG V++KEFKQMM+GGGF+ALG
Subjt:  DEEEDMREAFNVFDQNGDGFITVDELRSVLASLGLKQGRSAEDCKKMIMKVDVDGDGMVNYKEFKQMMKGGGFSALG

Q9LNE7 Calmodulin-like protein 76.9e-3279.76Show/hide
Query:  KSIMEERD-EEEDMREAFNVFDQNGDGFITVDELRSVLASLGLKQGRSAEDCKKMIMKVDVDGDGMVNYKEFKQMMKGGGFSAL
        K+IM+E D EEEDM+EAFNVFDQNGDGFITVDEL++VL+SLGLKQG++ +DCKKMI KVDVDGDG VNYKEF+QMMKGGGF++L
Subjt:  KSIMEERD-EEEDMREAFNVFDQNGDGFITVDELRSVLASLGLKQGRSAEDCKKMIMKVDVDGDGMVNYKEFKQMMKGGGFSAL

Q9SRR7 Calmodulin-like protein 31.4e-3588.1Show/hide
Query:  KSIMEERDEEEDMREAFNVFDQNGDGFITVDELRSVLASLGLKQGRSAEDCKKMIMKVDVDGDGMVNYKEFKQMMKGGGFSALG
        ++IMEERDEEEDMREAFNVFDQN DGFITV+ELRSVLASLGLKQGR+ EDCK+MI KVDVDGDGMVN+KEFKQMMKGGGF+ALG
Subjt:  KSIMEERDEEEDMREAFNVFDQNGDGFITVDELRSVLASLGLKQGRSAEDCKKMIMKVDVDGDGMVNYKEFKQMMKGGGFSALG

Q9SU00 Calmodulin-like protein 21.8e-3280.72Show/hide
Query:  KSIMEERDEEEDMREAFNVFDQNGDGFITVDELRSVLASLGLKQGRSAEDCKKMIMKVDVDGDGMVNYKEFKQMMKGGGFSAL
        + ++EE++EEEDMREAF VFDQNGDGFIT +ELRSVLAS+GLKQGR+ EDCKKMI KVDVDGDGMVN+KEFKQMM+GGGF+AL
Subjt:  KSIMEERDEEEDMREAFNVFDQNGDGFITVDELRSVLASLGLKQGRSAEDCKKMIMKVDVDGDGMVNYKEFKQMMKGGGFSAL

Arabidopsis top hitse value%identityAlignment
AT1G05990.1 EF hand calcium-binding protein family4.9e-3379.76Show/hide
Query:  KSIMEERD-EEEDMREAFNVFDQNGDGFITVDELRSVLASLGLKQGRSAEDCKKMIMKVDVDGDGMVNYKEFKQMMKGGGFSAL
        K+IM+E D EEEDM+EAFNVFDQNGDGFITVDEL++VL+SLGLKQG++ +DCKKMI KVDVDGDG VNYKEF+QMMKGGGF++L
Subjt:  KSIMEERD-EEEDMREAFNVFDQNGDGFITVDELRSVLASLGLKQGRSAEDCKKMIMKVDVDGDGMVNYKEFKQMMKGGGFSAL

AT2G43290.1 Calcium-binding EF-hand family protein7.4e-2978.38Show/hide
Query:  EEEDMREAFNVFDQNGDGFITVDELRSVLASLGLKQGRSAEDCKKMIMKVDVDGDGMVNYKEFKQMMKGGGFSA
        EEEDM++AFNVFDQ+GDGFITV+EL+SV+ASLGLKQG++ + CKKMIM+VD DGDG VNYKEF QMMKGGGFS+
Subjt:  EEEDMREAFNVFDQNGDGFITVDELRSVLASLGLKQGRSAEDCKKMIMKVDVDGDGMVNYKEFKQMMKGGGFSA

AT3G07490.1 ARF-GAP domain 119.6e-3788.1Show/hide
Query:  KSIMEERDEEEDMREAFNVFDQNGDGFITVDELRSVLASLGLKQGRSAEDCKKMIMKVDVDGDGMVNYKEFKQMMKGGGFSALG
        ++IMEERDEEEDMREAFNVFDQN DGFITV+ELRSVLASLGLKQGR+ EDCK+MI KVDVDGDGMVN+KEFKQMMKGGGF+ALG
Subjt:  KSIMEERDEEEDMREAFNVFDQNGDGFITVDELRSVLASLGLKQGRSAEDCKKMIMKVDVDGDGMVNYKEFKQMMKGGGFSALG

AT4G03290.1 EF hand calcium-binding protein family1.8e-2773.49Show/hide
Query:  KSIM-EERDE--EEDMREAFNVFDQNGDGFITVDELRSVLASLGLKQGRSAEDCKKMIMKVDVDGDGMVNYKEFKQMMKGGGF
        K+IM E+ DE  EEDM+EAFNVFD+NGDGFITVDEL++VL+SLGLKQG++ E+C+KMIM+VDVDGDG VNY EF+QMMK G F
Subjt:  KSIM-EERDE--EEDMREAFNVFDQNGDGFITVDELRSVLASLGLKQGRSAEDCKKMIMKVDVDGDGMVNYKEFKQMMKGGGF

AT4G12860.1 EF hand calcium-binding protein family1.3e-3380.72Show/hide
Query:  KSIMEERDEEEDMREAFNVFDQNGDGFITVDELRSVLASLGLKQGRSAEDCKKMIMKVDVDGDGMVNYKEFKQMMKGGGFSAL
        + ++EE++EEEDMREAF VFDQNGDGFIT +ELRSVLAS+GLKQGR+ EDCKKMI KVDVDGDGMVN+KEFKQMM+GGGF+AL
Subjt:  KSIMEERDEEEDMREAFNVFDQNGDGFITVDELRSVLASLGLKQGRSAEDCKKMIMKVDVDGDGMVNYKEFKQMMKGGGFSAL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAATCGATTATGGAGGAGCGGGACGAGGAGGAAGACATGAGAGAAGCCTTCAACGTGTTCGACCAGAACGGAGACGGATTCATCACCGTCGATGAATTGAGGTCAGTATT
AGCTTCTTTGGGGCTTAAGCAAGGTAGAAGTGCAGAGGATTGCAAGAAGATGATCATGAAGGTGGATGTGGATGGAGATGGAATGGTGAATTACAAAGAATTCAAGCAAA
TGATGAAGGGAGGTGGGTTTAGTGCATTAGGT
mRNA sequenceShow/hide mRNA sequence
AAATCGATTATGGAGGAGCGGGACGAGGAGGAAGACATGAGAGAAGCCTTCAACGTGTTCGACCAGAACGGAGACGGATTCATCACCGTCGATGAATTGAGGTCAGTATT
AGCTTCTTTGGGGCTTAAGCAAGGTAGAAGTGCAGAGGATTGCAAGAAGATGATCATGAAGGTGGATGTGGATGGAGATGGAATGGTGAATTACAAAGAATTCAAGCAAA
TGATGAAGGGAGGTGGGTTTAGTGCATTAGGT
Protein sequenceShow/hide protein sequence
KSIMEERDEEEDMREAFNVFDQNGDGFITVDELRSVLASLGLKQGRSAEDCKKMIMKVDVDGDGMVNYKEFKQMMKGGGFSALG