; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS023668 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS023668
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionMediator of RNA polymerase II transcription subunit 20
Genome locationscaffold570:157340..159403
RNA-Seq ExpressionMS023668
SyntenyMS023668
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0045893 - positive regulation of transcription, DNA-templated (biological process)
GO:0016592 - mediator complex (cellular component)
GO:0003713 - transcription coactivator activity (molecular function)
InterPro domainsIPR013921 - Mediator complex, subunit Med20


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061469.1 mediator of RNA polymerase II transcription subunit 20a-like isoform X1 [Cucumis melo var. makuwa]5.4e-10589.95Show/hide
Query:  VLHWQPNASSTVNSQILNEVSQCVESIHGVKGGKWKPT-TFYRPILRADQNLPAAEFPRDFLRISLPEQPNKYYLIIRGQRIVLEADFTIQTIMENLQSY
        VLHWQPNA STVNSQILNEVSQCVESIHGVKGGKWK T TFY+PILR DQN PAAEFPRDFL ISLPEQPNKYYLIIRGQRIVLEADFTIQ IME LQSY
Subjt:  VLHWQPNASSTVNSQILNEVSQCVESIHGVKGGKWKPT-TFYRPILRADQNLPAAEFPRDFLRISLPEQPNKYYLIIRGQRIVLEADFTIQTIMENLQSY

Query:  KLRVALNFEGFQYQLGDFQLRVGKVVPKHSENLRGIVMEMEYLPISSMEKSRQVMGGFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLLDYYTPQHTAVQY
        KLRVALNFEGFQYQLGDFQLRVGKVVP +SENLRGIVME+EYLPISSMEKSRQ+M  FF+VWQEAMSKSSLPGRFMHIE NFAEYGL D+YTPQHTAVQY
Subjt:  KLRVALNFEGFQYQLGDFQLRVGKVVPKHSENLRGIVMEMEYLPISSMEKSRQVMGGFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLLDYYTPQHTAVQY

Query:  ANVMAQLIGTVQAVQSVRN
         NVMAQLI TVQAVQS RN
Subjt:  ANVMAQLIGTVQAVQSVRN

XP_004141069.1 mediator of RNA polymerase II transcription subunit 20a [Cucumis sativus]1.6e-10490.41Show/hide
Query:  VLHWQPNASSTVNSQILNEVSQCVESIHGVKGGKWKPT-TFYRPILRADQNLPAAEFPRDFLRISLPEQPNKYYLIIRGQRIVLEADFTIQTIMENLQSY
        VLHWQPNA STVNSQILNEVSQCVESIHGVKGGKWK T TFY+PILR DQN PAAEFPRDFL ISLPEQPNKYYLIIRGQRIVLEADFTIQ IME LQSY
Subjt:  VLHWQPNASSTVNSQILNEVSQCVESIHGVKGGKWKPT-TFYRPILRADQNLPAAEFPRDFLRISLPEQPNKYYLIIRGQRIVLEADFTIQTIMENLQSY

Query:  KLRVALNFEGFQYQLGDFQLRVGKVVPKHSENLRGIVMEMEYLPISSMEKSRQVMGGFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLLDYYTPQHTAVQY
        KLRVALNFEGFQYQLGDFQLRVGKVVP +SENLRGIVME+EYLPISSMEKSRQVM  FF+VWQEAMSKSSLPGRFMHIE NFAEYGL DYYT QHTAVQY
Subjt:  KLRVALNFEGFQYQLGDFQLRVGKVVPKHSENLRGIVMEMEYLPISSMEKSRQVMGGFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLLDYYTPQHTAVQY

Query:  ANVMAQLIGTVQAVQSVRN
         NVMAQLI TVQAVQS RN
Subjt:  ANVMAQLIGTVQAVQSVRN

XP_008459711.1 PREDICTED: mediator of RNA polymerase II transcription subunit 20a-like isoform X1 [Cucumis melo]5.4e-10589.95Show/hide
Query:  VLHWQPNASSTVNSQILNEVSQCVESIHGVKGGKWKPT-TFYRPILRADQNLPAAEFPRDFLRISLPEQPNKYYLIIRGQRIVLEADFTIQTIMENLQSY
        VLHWQPNA STVNSQILNEVSQCVESIHGVKGGKWK T TFY+PILR DQN PAAEFPRDFL ISLPEQPNKYYLIIRGQRIVLEADFTIQ IME LQSY
Subjt:  VLHWQPNASSTVNSQILNEVSQCVESIHGVKGGKWKPT-TFYRPILRADQNLPAAEFPRDFLRISLPEQPNKYYLIIRGQRIVLEADFTIQTIMENLQSY

Query:  KLRVALNFEGFQYQLGDFQLRVGKVVPKHSENLRGIVMEMEYLPISSMEKSRQVMGGFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLLDYYTPQHTAVQY
        KLRVALNFEGFQYQLGDFQLRVGKVVP +SENLRGIVME+EYLPISSMEKSRQ+M  FF+VWQEAMSKSSLPGRFMHIE NFAEYGL D+YTPQHTAVQY
Subjt:  KLRVALNFEGFQYQLGDFQLRVGKVVPKHSENLRGIVMEMEYLPISSMEKSRQVMGGFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLLDYYTPQHTAVQY

Query:  ANVMAQLIGTVQAVQSVRN
         NVMAQLI TVQAVQS RN
Subjt:  ANVMAQLIGTVQAVQSVRN

XP_022946745.1 mediator of RNA polymerase II transcription subunit 20a-like [Cucurbita moschata]5.9e-10489.5Show/hide
Query:  VLHWQPNASSTVNSQILNEVSQCVESIHGVKGGKWKPT-TFYRPILRADQNLPAAEFPRDFLRISLPEQPNKYYLIIRGQRIVLEADFTIQTIMENLQSY
        VLHWQPNA STVNSQILNEVSQCVESIHGVKGGKWK T TFY+PILR D N+ A EFPRDFL IS+PEQPNKYYLIIRGQRIVLEADFTIQ IME LQSY
Subjt:  VLHWQPNASSTVNSQILNEVSQCVESIHGVKGGKWKPT-TFYRPILRADQNLPAAEFPRDFLRISLPEQPNKYYLIIRGQRIVLEADFTIQTIMENLQSY

Query:  KLRVALNFEGFQYQLGDFQLRVGKVVPKHSENLRGIVMEMEYLPISSMEKSRQVMGGFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLLDYYTPQHTAVQY
        KLRVALNFEGFQYQLGDFQLRVGKVVP +SENLRGIVME+EYLPISSMEKS+QVM  FFEVWQEAMSKSSLPGRFMHIEPNFAEYGL DYYT QHTAVQY
Subjt:  KLRVALNFEGFQYQLGDFQLRVGKVVPKHSENLRGIVMEMEYLPISSMEKSRQVMGGFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLLDYYTPQHTAVQY

Query:  ANVMAQLIGTVQAVQSVRN
        ANVMAQLI TVQAVQS RN
Subjt:  ANVMAQLIGTVQAVQSVRN

XP_038889134.1 mediator of RNA polymerase II transcription subunit 20a-like isoform X1 [Benincasa hispida]1.7e-10691.78Show/hide
Query:  VLHWQPNASSTVNSQILNEVSQCVESIHGVKGGKWKPT-TFYRPILRADQNLPAAEFPRDFLRISLPEQPNKYYLIIRGQRIVLEADFTIQTIMENLQSY
        VLHWQPNA STVNSQILNEVSQCVESIHGVKGGKWK T TFY+PILR DQNLPAAEFPRDFL ISLPEQPNKYYLIIRGQRIVLEADFTIQ IME LQSY
Subjt:  VLHWQPNASSTVNSQILNEVSQCVESIHGVKGGKWKPT-TFYRPILRADQNLPAAEFPRDFLRISLPEQPNKYYLIIRGQRIVLEADFTIQTIMENLQSY

Query:  KLRVALNFEGFQYQLGDFQLRVGKVVPKHSENLRGIVMEMEYLPISSMEKSRQVMGGFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLLDYYTPQHTAVQY
        KLRVALNFEGFQYQLGDFQLRVGKVVP +SENLRGIVME+EYLPISSMEKSR+VM  FFEVWQEAMSKSSLPGRFMHIEPNFAEYGL DYYT QHTAVQY
Subjt:  KLRVALNFEGFQYQLGDFQLRVGKVVPKHSENLRGIVMEMEYLPISSMEKSRQVMGGFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLLDYYTPQHTAVQY

Query:  ANVMAQLIGTVQAVQSVRN
        ANVMAQLI TVQAVQS RN
Subjt:  ANVMAQLIGTVQAVQSVRN

TrEMBL top hitse value%identityAlignment
A0A0A0LHQ1 Mediator of RNA polymerase II transcription subunit 207.5e-10590.41Show/hide
Query:  VLHWQPNASSTVNSQILNEVSQCVESIHGVKGGKWKPT-TFYRPILRADQNLPAAEFPRDFLRISLPEQPNKYYLIIRGQRIVLEADFTIQTIMENLQSY
        VLHWQPNA STVNSQILNEVSQCVESIHGVKGGKWK T TFY+PILR DQN PAAEFPRDFL ISLPEQPNKYYLIIRGQRIVLEADFTIQ IME LQSY
Subjt:  VLHWQPNASSTVNSQILNEVSQCVESIHGVKGGKWKPT-TFYRPILRADQNLPAAEFPRDFLRISLPEQPNKYYLIIRGQRIVLEADFTIQTIMENLQSY

Query:  KLRVALNFEGFQYQLGDFQLRVGKVVPKHSENLRGIVMEMEYLPISSMEKSRQVMGGFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLLDYYTPQHTAVQY
        KLRVALNFEGFQYQLGDFQLRVGKVVP +SENLRGIVME+EYLPISSMEKSRQVM  FF+VWQEAMSKSSLPGRFMHIE NFAEYGL DYYT QHTAVQY
Subjt:  KLRVALNFEGFQYQLGDFQLRVGKVVPKHSENLRGIVMEMEYLPISSMEKSRQVMGGFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLLDYYTPQHTAVQY

Query:  ANVMAQLIGTVQAVQSVRN
         NVMAQLI TVQAVQS RN
Subjt:  ANVMAQLIGTVQAVQSVRN

A0A1S3CAW6 Mediator of RNA polymerase II transcription subunit 202.6e-10589.95Show/hide
Query:  VLHWQPNASSTVNSQILNEVSQCVESIHGVKGGKWKPT-TFYRPILRADQNLPAAEFPRDFLRISLPEQPNKYYLIIRGQRIVLEADFTIQTIMENLQSY
        VLHWQPNA STVNSQILNEVSQCVESIHGVKGGKWK T TFY+PILR DQN PAAEFPRDFL ISLPEQPNKYYLIIRGQRIVLEADFTIQ IME LQSY
Subjt:  VLHWQPNASSTVNSQILNEVSQCVESIHGVKGGKWKPT-TFYRPILRADQNLPAAEFPRDFLRISLPEQPNKYYLIIRGQRIVLEADFTIQTIMENLQSY

Query:  KLRVALNFEGFQYQLGDFQLRVGKVVPKHSENLRGIVMEMEYLPISSMEKSRQVMGGFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLLDYYTPQHTAVQY
        KLRVALNFEGFQYQLGDFQLRVGKVVP +SENLRGIVME+EYLPISSMEKSRQ+M  FF+VWQEAMSKSSLPGRFMHIE NFAEYGL D+YTPQHTAVQY
Subjt:  KLRVALNFEGFQYQLGDFQLRVGKVVPKHSENLRGIVMEMEYLPISSMEKSRQVMGGFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLLDYYTPQHTAVQY

Query:  ANVMAQLIGTVQAVQSVRN
         NVMAQLI TVQAVQS RN
Subjt:  ANVMAQLIGTVQAVQSVRN

A0A5D3CH02 Mediator of RNA polymerase II transcription subunit 202.6e-10589.95Show/hide
Query:  VLHWQPNASSTVNSQILNEVSQCVESIHGVKGGKWKPT-TFYRPILRADQNLPAAEFPRDFLRISLPEQPNKYYLIIRGQRIVLEADFTIQTIMENLQSY
        VLHWQPNA STVNSQILNEVSQCVESIHGVKGGKWK T TFY+PILR DQN PAAEFPRDFL ISLPEQPNKYYLIIRGQRIVLEADFTIQ IME LQSY
Subjt:  VLHWQPNASSTVNSQILNEVSQCVESIHGVKGGKWKPT-TFYRPILRADQNLPAAEFPRDFLRISLPEQPNKYYLIIRGQRIVLEADFTIQTIMENLQSY

Query:  KLRVALNFEGFQYQLGDFQLRVGKVVPKHSENLRGIVMEMEYLPISSMEKSRQVMGGFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLLDYYTPQHTAVQY
        KLRVALNFEGFQYQLGDFQLRVGKVVP +SENLRGIVME+EYLPISSMEKSRQ+M  FF+VWQEAMSKSSLPGRFMHIE NFAEYGL D+YTPQHTAVQY
Subjt:  KLRVALNFEGFQYQLGDFQLRVGKVVPKHSENLRGIVMEMEYLPISSMEKSRQVMGGFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLLDYYTPQHTAVQY

Query:  ANVMAQLIGTVQAVQSVRN
         NVMAQLI TVQAVQS RN
Subjt:  ANVMAQLIGTVQAVQSVRN

A0A6J1G4U3 Mediator of RNA polymerase II transcription subunit 202.9e-10489.5Show/hide
Query:  VLHWQPNASSTVNSQILNEVSQCVESIHGVKGGKWKPT-TFYRPILRADQNLPAAEFPRDFLRISLPEQPNKYYLIIRGQRIVLEADFTIQTIMENLQSY
        VLHWQPNA STVNSQILNEVSQCVESIHGVKGGKWK T TFY+PILR D N+ A EFPRDFL IS+PEQPNKYYLIIRGQRIVLEADFTIQ IME LQSY
Subjt:  VLHWQPNASSTVNSQILNEVSQCVESIHGVKGGKWKPT-TFYRPILRADQNLPAAEFPRDFLRISLPEQPNKYYLIIRGQRIVLEADFTIQTIMENLQSY

Query:  KLRVALNFEGFQYQLGDFQLRVGKVVPKHSENLRGIVMEMEYLPISSMEKSRQVMGGFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLLDYYTPQHTAVQY
        KLRVALNFEGFQYQLGDFQLRVGKVVP +SENLRGIVME+EYLPISSMEKS+QVM  FFEVWQEAMSKSSLPGRFMHIEPNFAEYGL DYYT QHTAVQY
Subjt:  KLRVALNFEGFQYQLGDFQLRVGKVVPKHSENLRGIVMEMEYLPISSMEKSRQVMGGFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLLDYYTPQHTAVQY

Query:  ANVMAQLIGTVQAVQSVRN
        ANVMAQLI TVQAVQS RN
Subjt:  ANVMAQLIGTVQAVQSVRN

A0A6J1KEU1 Mediator of RNA polymerase II transcription subunit 202.9e-10489.5Show/hide
Query:  VLHWQPNASSTVNSQILNEVSQCVESIHGVKGGKWKPT-TFYRPILRADQNLPAAEFPRDFLRISLPEQPNKYYLIIRGQRIVLEADFTIQTIMENLQSY
        VLHWQPNA STVNSQILNEVSQCVESIHGVKGGKWK T TFY+PILR D N+ A EFPRDFL IS+PEQPNKYYLIIRGQRIVLEADFTIQ IME LQSY
Subjt:  VLHWQPNASSTVNSQILNEVSQCVESIHGVKGGKWKPT-TFYRPILRADQNLPAAEFPRDFLRISLPEQPNKYYLIIRGQRIVLEADFTIQTIMENLQSY

Query:  KLRVALNFEGFQYQLGDFQLRVGKVVPKHSENLRGIVMEMEYLPISSMEKSRQVMGGFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLLDYYTPQHTAVQY
        KLRVALNFEGFQYQLGDFQLRVGKVVP +SENLRGIVME+EYLPISSMEKS+QVM  FFEVWQEAMSKSSLPGRFMHIEPNFAEYGL DYYT QHTAVQY
Subjt:  KLRVALNFEGFQYQLGDFQLRVGKVVPKHSENLRGIVMEMEYLPISSMEKSRQVMGGFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLLDYYTPQHTAVQY

Query:  ANVMAQLIGTVQAVQSVRN
        ANVMAQLI TVQAVQS RN
Subjt:  ANVMAQLIGTVQAVQSVRN

SwissProt top hitse value%identityAlignment
Q54FL3 Putative mediator of RNA polymerase II transcription subunit 203.5e-0628.48Show/hide
Query:  PRDFLRISLPEQPNKYYLIIRGQRIVLEADFTIQTIMENLQSYKLRVALNFEGFQYQLGDFQLRVGKVVPKHSENLRGIVMEMEY----LPISSMEKSRQ
        PR+F  +   E+P K + + R    ++E D  + +I+E   SYK R        +Y+LGDF +RVG +V      +RGI++E+EY     P++S     +
Subjt:  PRDFLRISLPEQPNKYYLIIRGQRIVLEADFTIQTIMENLQSYKLRVALNFEGFQYQLGDFQLRVGKVVPKHSENLRGIVMEMEY----LPISSMEKSRQ

Query:  V--------MGGFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLLDYYTPQHTAVQYANV
        +        +G F E  Q +   S+ P              L   Y+  HT+ QY N+
Subjt:  V--------MGGFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLLDYYTPQHTAVQYANV

Q6NPF4 Mediator of RNA polymerase II transcription subunit 20a9.5e-8169.77Show/hide
Query:  VLHWQPNASSTVNSQILNEVSQCVESIHGVKGGKWKPT-TFYRPILRADQNLPAAEFPRDFLRISLPEQPNKYYLIIRGQRIVLEADFTIQTIMENLQSY
        VLHWQPN  STV+SQILNE +QCVESI+GVK G+WK T  +Y+P+L+   N    EFPRDFL ISL +QPNKYY IIR QRIVLEAD +IQ IME LQSY
Subjt:  VLHWQPNASSTVNSQILNEVSQCVESIHGVKGGKWKPT-TFYRPILRADQNLPAAEFPRDFLRISLPEQPNKYYLIIRGQRIVLEADFTIQTIMENLQSY

Query:  KLRVALNFEGFQYQLGDFQLRVGKVVPKHSENLRGIVMEMEYLPISSMEKSRQVMGGFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLLDYYTPQHTAVQY
        K +VAL F+GFQYQLGDF+LRVGKVVP HSEN+RGIVME+EYLPISSMEK+++VM  F E+W EA++K SLPG+F++I+ NF E+GL D YTPQHTAV+Y
Subjt:  KLRVALNFEGFQYQLGDFQLRVGKVVPKHSENLRGIVMEMEYLPISSMEKSRQVMGGFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLLDYYTPQHTAVQY

Query:  ANVMAQLIGTVQAVQ
        A VMA +I TVQAV+
Subjt:  ANVMAQLIGTVQAVQ

Q9M0S0 Mediator of RNA polymerase II transcription subunit 20b1.4e-7161.5Show/hide
Query:  VLHWQPNASSTVNSQILNEVSQCVESIHGVKGGKWKPT-TFYRPILRADQNLPAAEFPRDFLRISLPEQPNKYYLIIRGQRIVLEADFTIQTIMENLQSY
        +LHWQPN  ST +SQILNEV+Q +ES++GVK G WK T  +Y+P+L+   N   AEFPR+F+ ISLPE+P+KYY +IR QRIV+EAD +IQ IME+LQSY
Subjt:  VLHWQPNASSTVNSQILNEVSQCVESIHGVKGGKWKPT-TFYRPILRADQNLPAAEFPRDFLRISLPEQPNKYYLIIRGQRIVLEADFTIQTIMENLQSY

Query:  KLRVALNFEGFQYQLGDFQLRVGKVVPKHSENLRGIVMEMEYLPISSMEKSRQVMGGFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLLDYYTPQHTAVQY
        K +++  FEG +YQLGDF+LRVGKVVP H+E +RG+VME+EYLPISSM  ++++M  F E+WQEAMSK SLPG+F++ E NF ++GL D YTPQHTAV Y
Subjt:  KLRVALNFEGFQYQLGDFQLRVGKVVPKHSENLRGIVMEMEYLPISSMEKSRQVMGGFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLLDYYTPQHTAVQY

Query:  ANVMAQLIGTVQA
        A  MA L+  +QA
Subjt:  ANVMAQLIGTVQA

Arabidopsis top hitse value%identityAlignment
AT2G28020.1 BEST Arabidopsis thaliana protein match is: TATA-binding related factor (TRF) of subunit 20 of Mediator complex (TAIR:AT2G28230.1)1.4e-1560.29Show/hide
Query:  MEKSRQVMGGFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLLDYYTPQHTAVQ-YANVMAQLIGTVQAV
        ME +R+VM  F E+W EA++K SLPG+F++ + NF E+GL D YTPQHTAV+ YA VMA +I TVQAV
Subjt:  MEKSRQVMGGFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLLDYYTPQHTAVQ-YANVMAQLIGTVQAV

AT2G28230.1 TATA-binding related factor (TRF) of subunit 20 of Mediator complex6.8e-8269.77Show/hide
Query:  VLHWQPNASSTVNSQILNEVSQCVESIHGVKGGKWKPT-TFYRPILRADQNLPAAEFPRDFLRISLPEQPNKYYLIIRGQRIVLEADFTIQTIMENLQSY
        VLHWQPN  STV+SQILNE +QCVESI+GVK G+WK T  +Y+P+L+   N    EFPRDFL ISL +QPNKYY IIR QRIVLEAD +IQ IME LQSY
Subjt:  VLHWQPNASSTVNSQILNEVSQCVESIHGVKGGKWKPT-TFYRPILRADQNLPAAEFPRDFLRISLPEQPNKYYLIIRGQRIVLEADFTIQTIMENLQSY

Query:  KLRVALNFEGFQYQLGDFQLRVGKVVPKHSENLRGIVMEMEYLPISSMEKSRQVMGGFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLLDYYTPQHTAVQY
        K +VAL F+GFQYQLGDF+LRVGKVVP HSEN+RGIVME+EYLPISSMEK+++VM  F E+W EA++K SLPG+F++I+ NF E+GL D YTPQHTAV+Y
Subjt:  KLRVALNFEGFQYQLGDFQLRVGKVVPKHSENLRGIVMEMEYLPISSMEKSRQVMGGFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLLDYYTPQHTAVQY

Query:  ANVMAQLIGTVQAVQ
        A VMA +I TVQAV+
Subjt:  ANVMAQLIGTVQAVQ

AT4G09070.1 TATA-binding related factor (TRF) of subunit 20 of Mediator complex9.8e-7361.5Show/hide
Query:  VLHWQPNASSTVNSQILNEVSQCVESIHGVKGGKWKPT-TFYRPILRADQNLPAAEFPRDFLRISLPEQPNKYYLIIRGQRIVLEADFTIQTIMENLQSY
        +LHWQPN  ST +SQILNEV+Q +ES++GVK G WK T  +Y+P+L+   N   AEFPR+F+ ISLPE+P+KYY +IR QRIV+EAD +IQ IME+LQSY
Subjt:  VLHWQPNASSTVNSQILNEVSQCVESIHGVKGGKWKPT-TFYRPILRADQNLPAAEFPRDFLRISLPEQPNKYYLIIRGQRIVLEADFTIQTIMENLQSY

Query:  KLRVALNFEGFQYQLGDFQLRVGKVVPKHSENLRGIVMEMEYLPISSMEKSRQVMGGFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLLDYYTPQHTAVQY
        K +++  FEG +YQLGDF+LRVGKVVP H+E +RG+VME+EYLPISSM  ++++M  F E+WQEAMSK SLPG+F++ E NF ++GL D YTPQHTAV Y
Subjt:  KLRVALNFEGFQYQLGDFQLRVGKVVPKHSENLRGIVMEMEYLPISSMEKSRQVMGGFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLLDYYTPQHTAVQY

Query:  ANVMAQLIGTVQA
        A  MA L+  +QA
Subjt:  ANVMAQLIGTVQA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTGGCTAGGGTTTTGCATTGGCAACCGAATGCCAGCAGCACTGTTAACAGTCAGATCCTCAACGAAGTTTCTCAATGTGTTGAGAGTATCCATGGCGTTAAAGGGGGCAA
GTGGAAACCTACTACCTTTTACAGACCCATCTTACGAGCAGACCAAAACTTACCGGCGGCCGAGTTCCCGCGCGACTTTCTCAGAATCTCGCTGCCGGAGCAACCAAACA
AGTATTATCTTATAATCCGTGGCCAACGGATCGTCTTAGAAGCTGATTTTACGATTCAAACTATAATGGAGAATTTGCAGTCTTACAAATTGCGCGTTGCTCTCAATTTC
GAGGGGTTCCAATACCAATTAGGGGATTTCCAACTGAGAGTGGGAAAAGTTGTTCCCAAGCATTCTGAGAATTTGAGAGGAATAGTTATGGAGATGGAGTATCTCCCAAT
TTCTTCAATGGAGAAATCAAGACAGGTGATGGGGGGATTCTTCGAGGTATGGCAAGAAGCCATGTCAAAAAGTTCACTGCCAGGTCGTTTCATGCACATAGAACCGAACT
TTGCAGAATATGGACTGTTGGATTACTACACTCCTCAACACACAGCCGTTCAGTATGCCAATGTCATGGCTCAACTAATCGGAACAGTTCAAGCAGTTCAATCAGTGAGA
AAT
mRNA sequenceShow/hide mRNA sequence
TTGGCTAGGGTTTTGCATTGGCAACCGAATGCCAGCAGCACTGTTAACAGTCAGATCCTCAACGAAGTTTCTCAATGTGTTGAGAGTATCCATGGCGTTAAAGGGGGCAA
GTGGAAACCTACTACCTTTTACAGACCCATCTTACGAGCAGACCAAAACTTACCGGCGGCCGAGTTCCCGCGCGACTTTCTCAGAATCTCGCTGCCGGAGCAACCAAACA
AGTATTATCTTATAATCCGTGGCCAACGGATCGTCTTAGAAGCTGATTTTACGATTCAAACTATAATGGAGAATTTGCAGTCTTACAAATTGCGCGTTGCTCTCAATTTC
GAGGGGTTCCAATACCAATTAGGGGATTTCCAACTGAGAGTGGGAAAAGTTGTTCCCAAGCATTCTGAGAATTTGAGAGGAATAGTTATGGAGATGGAGTATCTCCCAAT
TTCTTCAATGGAGAAATCAAGACAGGTGATGGGGGGATTCTTCGAGGTATGGCAAGAAGCCATGTCAAAAAGTTCACTGCCAGGTCGTTTCATGCACATAGAACCGAACT
TTGCAGAATATGGACTGTTGGATTACTACACTCCTCAACACACAGCCGTTCAGTATGCCAATGTCATGGCTCAACTAATCGGAACAGTTCAAGCAGTTCAATCAGTGAGA
AAT
Protein sequenceShow/hide protein sequence
LARVLHWQPNASSTVNSQILNEVSQCVESIHGVKGGKWKPTTFYRPILRADQNLPAAEFPRDFLRISLPEQPNKYYLIIRGQRIVLEADFTIQTIMENLQSYKLRVALNF
EGFQYQLGDFQLRVGKVVPKHSENLRGIVMEMEYLPISSMEKSRQVMGGFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLLDYYTPQHTAVQYANVMAQLIGTVQAVQSVR
N