CuGenDBv2

Gene ID	MS023677
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	40S ribosomal S3-like protein
Genome location	scaffold570:199103..201343
RNA-Seq Expression	MS023677
Synteny	MS023677
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0005634 - nucleus (cellular component) GO:0022627 - cytosolic small ribosomal subunit (cellular component) GO:0003723 - RNA binding (molecular function) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR001351 - Ribosomal protein S3, C-terminal IPR004044 - K Homology domain, type 2 IPR005703 - Ribosomal protein S3, eukaryotic/archaeal IPR009019 - K homology domain superfamily, prokaryotic type IPR015946 - K homology domain-like, alpha/beta IPR018280 - Ribosomal protein S3, conserved site IPR036419 - Ribosomal protein S3, C-terminal domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6599520.1 40S ribosomal protein S3-1, partial [Cucurbita argyrosperma subsp. sororia]

2.2e-117

96.12

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Query:  QFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKL
        +FVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKL
Subjt:  QFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKL

Query:  LGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDVVT
        LGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDVV 
Subjt:  LGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDVVT

Query:  IHSPKEEEEIVHRP----AILSTDIEIPVVVA
        IHSPKEEEEIVHRP    A+L+TDIE+PVVVA
Subjt:  IHSPKEEEEIVHRP----AILSTDIEIPVVVA

XP_022154712.1 40S ribosomal protein S3-2-like [Momordica charantia]

2.8e-120

99.56

Show/hide

Query:  QFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKL
        +FVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKL
Subjt:  QFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKL

Query:  LGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDVVT
        LGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDVVT
Subjt:  LGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDVVT

Query:  IHSPKEEEEIVHRPAILSTDIEIPVVVA
        IHSPKEEEEIVHRPAILSTDIEIPVVVA
Subjt:  IHSPKEEEEIVHRPAILSTDIEIPVVVA

XP_022946744.1 40S ribosomal protein S3-2-like [Cucurbita moschata]

3.8e-117

95.3

Show/hide

Query:  QFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKL
        +FVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKL
Subjt:  QFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKL

Query:  LGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDVVT
        LGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDVV 
Subjt:  LGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDVVT

Query:  IHSPKEEEEIVHRP------AILSTDIEIPVVVA
        IHSPKEEEEIVHRP      A+L+TDIE+PVVVA
Subjt:  IHSPKEEEEIVHRP------AILSTDIEIPVVVA

XP_023546322.1 40S ribosomal protein S3-2-like [Cucurbita pepo subsp. pepo]

1.3e-117

96.96

Show/hide

Query:  QFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKL
        +FVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKL
Subjt:  QFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKL

Query:  LGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDVVT
        LGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDVV 
Subjt:  LGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDVVT

Query:  IHSPKEEEEIVHRP--AILSTDIEIPVVVA
        IHSPKEEEEIVHRP  A+L+TDIE+PVVVA
Subjt:  IHSPKEEEEIVHRP--AILSTDIEIPVVVA

XP_038890738.1 40S ribosomal protein S3-2 [Benincasa hispida]

2.2e-117

97.37

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Query:  QFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKL
        +FVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKL
Subjt:  QFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKL

Query:  LGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDVVT
        LGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDVVT
Subjt:  LGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDVVT

Query:  IHSPKEEEEIVHRP-AILSTDIEIPVVV
        IHSPKEEEEIVHRP A+L+TDIE+PV V
Subjt:  IHSPKEEEEIVHRP-AILSTDIEIPVVV

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LHQ6 KH type-2 domain-containing protein

4.1e-117

96.93

Show/hide

Query:  QFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKL
        +FVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKL
Subjt:  QFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKL

Query:  LGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDVVT
        LGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDVVT
Subjt:  LGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDVVT

Query:  IHSPKEEEEIVHR-PAILSTDIEIPVVV
        IHSPKEEEEIVHR PA+L+ DIE+PV V
Subjt:  IHSPKEEEEIVHR-PAILSTDIEIPVVV

A0A1S3CAV4 40S ribosomal protein S3-2

4.1e-117

96.93

Show/hide

Query:  QFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKL
        +FVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKL
Subjt:  QFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKL

Query:  LGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDVVT
        LGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDVVT
Subjt:  LGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDVVT

Query:  IHSPKEEEEIVHR-PAILSTDIEIPVVV
        IHSPKEEEEIVHR PA+L+ DIE+PV V
Subjt:  IHSPKEEEEIVHR-PAILSTDIEIPVVV

A0A6J1DMD4 40S ribosomal protein S3-2-like

1.3e-120

99.56

Show/hide

Query:  QFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKL
        +FVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKL
Subjt:  QFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKL

Query:  LGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDVVT
        LGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDVVT
Subjt:  LGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDVVT

Query:  IHSPKEEEEIVHRPAILSTDIEIPVVVA
        IHSPKEEEEIVHRPAILSTDIEIPVVVA
Subjt:  IHSPKEEEEIVHRPAILSTDIEIPVVVA

A0A6J1G4R4 40S ribosomal protein S3-2-like

1.8e-117

95.3

Show/hide

Query:  QFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKL
        +FVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKL
Subjt:  QFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKL

Query:  LGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDVVT
        LGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDVV 
Subjt:  LGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDVVT

Query:  IHSPKEEEEIVHRP------AILSTDIEIPVVVA
        IHSPKEEEEIVHRP      A+L+TDIE+PVVVA
Subjt:  IHSPKEEEEIVHRP------AILSTDIEIPVVVA

A0A6J1KF90 40S ribosomal protein S3-2-like

3.1e-117

95.69

Show/hide

Query:  QFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKL
        +FVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTS VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKL
Subjt:  QFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKL

Query:  LGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDVVT
        LGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDVV 
Subjt:  LGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDVVT

Query:  IHSPKEEEEIVHRP----AILSTDIEIPVVVA
        IHSPKEEEEIVHRP    A+L+TDIE+PVVVA
Subjt:  IHSPKEEEEIVHRP----AILSTDIEIPVVVA

SwissProt top hits

e value

%identity

Alignment

E2RH47 40S ribosomal protein S3

1.5e-92

84.54

Show/hide

Query:  QFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKL
        +FVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLGEKGRRIRELT+VVQKRF FPE SVELYAEKV  RGLCAIAQAESLRYKL
Subjt:  QFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKL

Query:  LGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDVVT
        LGGLAVRRACYGVLRF+MESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PV  Y+D+AVRHVLLRQGVLGIKVKIML WDP GK GP  PLPD V+
Subjt:  LGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDVVT

Query:  IHSPKEE
        I  PK+E
Subjt:  IHSPKEE

P02350 40S ribosomal protein S3-A

1.5e-92

84.54

Show/hide

Query:  QFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKL
        +FVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLGEKGRRIRELT+VVQKRF FPE SVELYAEKV  RGLCAIAQAESLRYKL
Subjt:  QFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKL

Query:  LGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDVVT
        LGGLAVRRACYGVLRF+MESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PV  Y+D+AVRHVLLRQGVLGIKVKIML WDP GK GP  PLPD V+
Subjt:  LGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDVVT

Query:  IHSPKEE
        I  PK+E
Subjt:  IHSPKEE

Q9FJA6 40S ribosomal protein S3-3

7.7e-105

85.27

Show/hide

Query:  QFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKL
        +FVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTS+VQKRFKFP++SVELYAEKV NRGLCAIAQAESLRYKL
Subjt:  QFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKL

Query:  LGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDVVT
        LGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP ++YID+AVRHVLLRQGVLG+KVKIMLDWDPKGKQGP TPLPDVV 
Subjt:  LGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDVVT

Query:  IHSPKEEEEIVHRPAILSTDIEIP
        IH+PKE++  +    +++    +P
Subjt:  IHSPKEEEEIVHRPAILSTDIEIP

Q9M339 40S ribosomal protein S3-2

5.3e-106

86.58

Show/hide

Query:  QFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKL
        +FVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTS+VQKRFKFP +SVELYAEKVNNRGLCAIAQAESLRYKL
Subjt:  QFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKL

Query:  LGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDVVT
        LGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP ++YIDSAVRHVLLRQGVLGIKVK+MLDWDPKG  GP TPLPDVV 
Subjt:  LGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDVVT

Query:  IHSPKEEEEI-----VHRPAILSTDIEIPVV
        IHSPKEEE I     V  PA L  D  +  V
Subjt:  IHSPKEEEEI-----VHRPAILSTDIEIPVV

Q9SIP7 40S ribosomal protein S3-1

8.5e-104

91.3

Show/hide

Query:  QFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKL
        +FVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTS+VQKRFKFP +SVELYAEKVNNRGLCAIAQAESLRYKL
Subjt:  QFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKL

Query:  LGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDVVT
        LGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP ++YID+AVRHVLLRQGVLGIKVKIMLDWDP GK GP TPLPDVV 
Subjt:  LGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDVVT

Query:  IHSPKEE
        IH+PK++
Subjt:  IHSPKEE

Arabidopsis top hits

e value

%identity

Alignment

AT2G31610.1 Ribosomal protein S3 family protein

6.0e-105

91.3

Show/hide

Query:  QFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKL
        +FVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTS+VQKRFKFP +SVELYAEKVNNRGLCAIAQAESLRYKL
Subjt:  QFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKL

Query:  LGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDVVT
        LGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP ++YID+AVRHVLLRQGVLGIKVKIMLDWDP GK GP TPLPDVV 
Subjt:  LGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDVVT

Query:  IHSPKEE
        IH+PK++
Subjt:  IHSPKEE

AT3G53870.1 Ribosomal protein S3 family protein

3.8e-107

86.58

Show/hide

Query:  QFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKL
        +FVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTS+VQKRFKFP +SVELYAEKVNNRGLCAIAQAESLRYKL
Subjt:  QFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKL

Query:  LGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDVVT
        LGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP ++YIDSAVRHVLLRQGVLGIKVK+MLDWDPKG  GP TPLPDVV 
Subjt:  LGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDVVT

Query:  IHSPKEEEEI-----VHRPAILSTDIEIPVV
        IHSPKEEE I     V  PA L  D  +  V
Subjt:  IHSPKEEEEI-----VHRPAILSTDIEIPVV

AT5G35530.1 Ribosomal protein S3 family protein

5.4e-106

85.27

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Query:  QFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKL
        +FVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTS+VQKRFKFP++SVELYAEKV NRGLCAIAQAESLRYKL
Subjt:  QFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKL

Query:  LGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDVVT
        LGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP ++YID+AVRHVLLRQGVLG+KVKIMLDWDPKGKQGP TPLPDVV 
Subjt:  LGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDVVT

Query:  IHSPKEEEEIVHRPAILSTDIEIP
        IH+PKE++  +    +++    +P
Subjt:  IHSPKEEEEIVHRPAILSTDIEIP

Sequences

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CDS sequence

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TGTTCGATTTTGTTGCAGTTCGTAGCCGATGGAGTATTTTTTGCCGAGTTAAACGAGGTTCTGACCAGAGAGTTGGCTGAGGATGGATACTCCGGAGTTGAGGTTAGAGT
AACTCCTATGCGCACCGAGATCATCATCCGAGCCACCCGCACCCAAAACGTTCTCGGAGAAAAGGGCAGGAGAATTAGGGAACTGACCTCGGTTGTGCAGAAGCGGTTCA
AGTTTCCGGAGAACAGTGTTGAGCTTTATGCCGAGAAAGTTAACAACAGAGGGCTTTGCGCCATTGCCCAAGCCGAATCTCTTCGCTATAAGCTACTTGGTGGCCTTGCT
GTTCGGAGGGCATGCTATGGTGTTCTGAGATTTGTCATGGAAAGTGGAGCAAAGGGTTGTGAGGTGATTGTTAGCGGAAAGCTCAGGGCACAGCGTGCCAAGTCTATGAA
GTTCAAGGATGGATACATGATATCTTCAGGTCAACCAGTCAGAGATTATATTGACTCTGCTGTTAGACATGTTCTTCTCAGACAGGGTGTTCTGGGTATCAAAGTTAAGA
TAATGCTCGACTGGGATCCTAAGGGCAAGCAAGGCCCTACCACTCCGCTCCCTGATGTTGTTACCATCCACTCTCCCAAGGAGGAAGAAGAAATCGTCCATAGACCAGCA
ATTTTGTCCACTGATATTGAGATTCCAGTAGTAGTTGCT

mRNA sequence

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Protein sequence

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CSILLQFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLA
VRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHRPA
ILSTDIEIPVVVA

MS023677 (gene) of Bitter gourd (TR) v1 genome