; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS023683 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS023683
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionNuclear transcription factor Y subunit
Genome locationscaffold570:230062..232310
RNA-Seq ExpressionMS023683
SyntenyMS023683
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0016602 - CCAAT-binding factor complex (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR001289 - Nuclear transcription factor Y subunit A
IPR018362 - CCAAT-binding factor, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7030504.1 Nuclear transcription factor Y subunit A-3 [Cucurbita argyrosperma subsp. argyrosperma]8.7e-11474.83Show/hide
Query:  IPVALSDNITLKLETPAQPYHKQLGLELQDQESSTAHSTGQSLHKVCPMEAQNTQEQCVSSESGQDENCGESVENQMKSVILLSNPEFMFNSPQVDGCPS
        IP+ LSDN TLKLET  Q +HK LG +L DQESSTAHS G+SLHKVC ME QN QEQC+SSESGQ+ENCGES ENQMK VIL SNPEFMFNSPQVDG   
Subjt:  IPVALSDNITLKLETPAQPYHKQLGLELQDQESSTAHSTGQSLHKVCPMEAQNTQEQCVSSESGQDENCGESVENQMKSVILLSNPEFMFNSPQVDGCPS

Query:  SMARVSYPYIDPYYGGLLYGGYGQQAIHNQAQISSNVVGIAPARVPLPHGLAEDGPIYVNAKQYHGILRRRQSRAKLEAQNKVIRNRKPYLHESRHIHAL
         M RV YPYIDPYYGGLL   Y QQAI+NQAQ+++NVVGIAPARVP+PH LAEDGPIYVNAKQYHGILRRRQSRAKLEAQN+VIRNRKPYLHESRH+HAL
Subjt:  SMARVSYPYIDPYYGGLLYGGYGQQAIHNQAQISSNVVGIAPARVPLPHGLAEDGPIYVNAKQYHGILRRRQSRAKLEAQNKVIRNRKPYLHESRHIHAL

Query:  NRVRGSGGRFLSAKKNQPPDPNRITLPTTLRQKKDTPDFNNCSSETGDRDHSIMTATCSDISSISNGSVRFGQPNNRFSTISSNMGGRMEQYRG
        NRVRGSGGRFLS+KKNQ   P + T  TTL Q+ +TPDFN CSSET DR  S      S+I+SISNGSVRFG+ +++ S +SS MGGRMEQY G
Subjt:  NRVRGSGGRFLSAKKNQPPDPNRITLPTTLRQKKDTPDFNNCSSETGDRDHSIMTATCSDISSISNGSVRFGQPNNRFSTISSNMGGRMEQYRG

XP_022154673.1 nuclear transcription factor Y subunit A-3-like [Momordica charantia]1.8e-16799.01Show/hide
Query:  IPVALSDNITLKLETPAQPYHKQLGLELQDQESSTAHSTGQSLHKVCPMEAQNTQEQCVSSESGQDENCGESVENQMKSVILLSNPEFMFNSPQVDGCPS
        IPVALSDNITLKLETPAQPYHKQLGLELQDQESSTAHSTGQSLHKVCPMEAQNTQEQCVSSESGQDENCGESVENQMKSVILLSNPEFMFNSPQVDGCPS
Subjt:  IPVALSDNITLKLETPAQPYHKQLGLELQDQESSTAHSTGQSLHKVCPMEAQNTQEQCVSSESGQDENCGESVENQMKSVILLSNPEFMFNSPQVDGCPS

Query:  SMARVSYPYIDPYYGGLLYGGYGQQAIHNQAQISSNVVGIAPARVPLPHGLAEDGPIYVNAKQYHGILRRRQSRAKLEAQNKVIRNRKPYLHESRHIHAL
        SMARVSYPYIDPYYGGLLYGGY QQAIHNQAQ+SSNVVGIAPARVPLPHGLAEDGPIYVNAKQYHGILRRRQSRAKLEAQNKVIRNRKPYLHESRHIHAL
Subjt:  SMARVSYPYIDPYYGGLLYGGYGQQAIHNQAQISSNVVGIAPARVPLPHGLAEDGPIYVNAKQYHGILRRRQSRAKLEAQNKVIRNRKPYLHESRHIHAL

Query:  NRVRGSGGRFLSAKKNQPPDPNRITLPTTLRQKKDTPDFNNCSSETGDRDHSIMTATCSDISSISNGSVRFGQPNNRFSTISSNMGGRMEQYRGGGFVQG
        NRVRGSGGRFLSAKKNQPPDPNRITLPTTLRQKKDTPDFNNCSSETGDRDHSIMTATCSDISSISNGSVRFGQPNNRFSTISSNMGGRMEQYRGG FVQG
Subjt:  NRVRGSGGRFLSAKKNQPPDPNRITLPTTLRQKKDTPDFNNCSSETGDRDHSIMTATCSDISSISNGSVRFGQPNNRFSTISSNMGGRMEQYRGGGFVQG

Query:  ETRS
        ETRS
Subjt:  ETRS

XP_023546978.1 nuclear transcription factor Y subunit A-3-like [Cucurbita pepo subsp. pepo]2.3e-11475.17Show/hide
Query:  IPVALSDNITLKLETPAQPYHKQLGLELQDQESSTAHSTGQSLHKVCPMEAQNTQEQCVSSESGQDENCGESVENQMKSVILLSNPEFMFNSPQVDGCPS
        IP+ LSDN TLKLETP Q +HK LG +L DQESSTAHS G+SLHKVC ME QN QEQC+SSESGQ+ENCGESVENQMK VIL SNPEFMFNSPQVDG   
Subjt:  IPVALSDNITLKLETPAQPYHKQLGLELQDQESSTAHSTGQSLHKVCPMEAQNTQEQCVSSESGQDENCGESVENQMKSVILLSNPEFMFNSPQVDGCPS

Query:  SMARVSYPYIDPYYGGLLYGGYGQQAIHNQAQISSNVVGIAPARVPLPHGLAEDGPIYVNAKQYHGILRRRQSRAKLEAQNKVIRNRKPYLHESRHIHAL
         M RV YPYIDPYYGGLL   Y QQAI+NQAQ+++NVVGIAPARVP+PH LAEDGPIYVNAKQYHGILRRRQSRAKLEAQN+VIRNRKPYLHESRH+HAL
Subjt:  SMARVSYPYIDPYYGGLLYGGYGQQAIHNQAQISSNVVGIAPARVPLPHGLAEDGPIYVNAKQYHGILRRRQSRAKLEAQNKVIRNRKPYLHESRHIHAL

Query:  NRVRGSGGRFLSAKKNQPPDPNRITLPTTLRQKKDTPDFNNCSSETGDRDHSIMTATCSDISSISNGSVRFGQPNNRFSTISSNMGGRMEQYRG
        NRVRGSGGRFLS+KKNQ   P + T  TTL Q+ +TPDFN CSSET DR  S      S+I+SIS GSVRFG+ +++ S +SS MGGRMEQY G
Subjt:  NRVRGSGGRFLSAKKNQPPDPNRITLPTTLRQKKDTPDFNNCSSETGDRDHSIMTATCSDISSISNGSVRFGQPNNRFSTISSNMGGRMEQYRG

XP_038890752.1 nuclear transcription factor Y subunit A-4-like isoform X1 [Benincasa hispida]1.5e-11877.48Show/hide
Query:  IPVALSDNITLKLETPAQPYHKQL--GLELQDQESSTAHSTGQSLHKVCPMEAQNTQEQCVSSESGQDENCGESVENQMKSVILLSNPEFMFNSPQVDGC
        I +ALSDNITLKLETP QP+HK L  GL+L DQESSTAHS GQSL KVC ME QN QEQC+SSESGQDENCGESVENQMK  IL SNPEFM NS QVDG 
Subjt:  IPVALSDNITLKLETPAQPYHKQL--GLELQDQESSTAHSTGQSLHKVCPMEAQNTQEQCVSSESGQDENCGESVENQMKSVILLSNPEFMFNSPQVDGC

Query:  PSSMARVSYPYIDPYYGGLLYGGYGQQAIHNQAQISSNVVGIAPARVPLPHGLAEDGPIYVNAKQYHGILRRRQSRAKLEAQNKVIRNRKPYLHESRHIH
           M RVSYPYIDPYY GLL   Y QQAI+ QAQ++S+ VGIAPARVP+ HGLAEDGPIYVNAKQYHGILRRRQSRAKLEAQNKVIRNRKPYLHESRH+H
Subjt:  PSSMARVSYPYIDPYYGGLLYGGYGQQAIHNQAQISSNVVGIAPARVPLPHGLAEDGPIYVNAKQYHGILRRRQSRAKLEAQNKVIRNRKPYLHESRHIH

Query:  ALNRVRGSGGRFLSAKKNQPPDPNRITLPTTLRQKKDTPDFNNCSSETGDRDHSIMTATCSDISSISNGSVRFGQPNNRFSTISSNMGGRMEQYRGGGFV
        ALNRVRGSGGRFLS KKNQP D   IT P TL Q+K TPDFN CS ETGDR    MTATCS+I+SISNGSV FG+ +++FST+SSN GGRMEQYR G FV
Subjt:  ALNRVRGSGGRFLSAKKNQPPDPNRITLPTTLRQKKDTPDFNNCSSETGDRDHSIMTATCSDISSISNGSVRFGQPNNRFSTISSNMGGRMEQYRGGGFV

Query:  QG
         G
Subjt:  QG

XP_038890756.1 nuclear transcription factor Y subunit A-4-like isoform X2 [Benincasa hispida]2.4e-11677.15Show/hide
Query:  IPVALSDNITLKLETPAQPYHKQL--GLELQDQESSTAHSTGQSLHKVCPMEAQNTQEQCVSSESGQDENCGESVENQMKSVILLSNPEFMFNSPQVDGC
        I +ALSDNITLKLETP QP+HK L  GL+L DQESSTAHS GQSL KVC ME QN QEQC+SSESGQDENCGESVENQMK  IL SNPEFM NS QVDG 
Subjt:  IPVALSDNITLKLETPAQPYHKQL--GLELQDQESSTAHSTGQSLHKVCPMEAQNTQEQCVSSESGQDENCGESVENQMKSVILLSNPEFMFNSPQVDGC

Query:  PSSMARVSYPYIDPYYGGLLYGGYGQQAIHNQAQISSNVVGIAPARVPLPHGLAEDGPIYVNAKQYHGILRRRQSRAKLEAQNKVIRNRKPYLHESRHIH
           M RVSYPYIDPYY GLL   Y QQAI+  AQ++S+ VGIAPARVP+ HGLAEDGPIYVNAKQYHGILRRRQSRAKLEAQNKVIRNRKPYLHESRH+H
Subjt:  PSSMARVSYPYIDPYYGGLLYGGYGQQAIHNQAQISSNVVGIAPARVPLPHGLAEDGPIYVNAKQYHGILRRRQSRAKLEAQNKVIRNRKPYLHESRHIH

Query:  ALNRVRGSGGRFLSAKKNQPPDPNRITLPTTLRQKKDTPDFNNCSSETGDRDHSIMTATCSDISSISNGSVRFGQPNNRFSTISSNMGGRMEQYRGGGFV
        ALNRVRGSGGRFLS KKNQP D   IT P TL Q+K TPDFN CS ETGDR    MTATCS+I+SISNGSV FG+ +++FST+SSN GGRMEQYR G FV
Subjt:  ALNRVRGSGGRFLSAKKNQPPDPNRITLPTTLRQKKDTPDFNNCSSETGDRDHSIMTATCSDISSISNGSVRFGQPNNRFSTISSNMGGRMEQYRGGGFV

Query:  QG
         G
Subjt:  QG

TrEMBL top hitse value%identityAlignment
A0A6J1DKY5 Nuclear transcription factor Y subunit8.6e-16899.01Show/hide
Query:  IPVALSDNITLKLETPAQPYHKQLGLELQDQESSTAHSTGQSLHKVCPMEAQNTQEQCVSSESGQDENCGESVENQMKSVILLSNPEFMFNSPQVDGCPS
        IPVALSDNITLKLETPAQPYHKQLGLELQDQESSTAHSTGQSLHKVCPMEAQNTQEQCVSSESGQDENCGESVENQMKSVILLSNPEFMFNSPQVDGCPS
Subjt:  IPVALSDNITLKLETPAQPYHKQLGLELQDQESSTAHSTGQSLHKVCPMEAQNTQEQCVSSESGQDENCGESVENQMKSVILLSNPEFMFNSPQVDGCPS

Query:  SMARVSYPYIDPYYGGLLYGGYGQQAIHNQAQISSNVVGIAPARVPLPHGLAEDGPIYVNAKQYHGILRRRQSRAKLEAQNKVIRNRKPYLHESRHIHAL
        SMARVSYPYIDPYYGGLLYGGY QQAIHNQAQ+SSNVVGIAPARVPLPHGLAEDGPIYVNAKQYHGILRRRQSRAKLEAQNKVIRNRKPYLHESRHIHAL
Subjt:  SMARVSYPYIDPYYGGLLYGGYGQQAIHNQAQISSNVVGIAPARVPLPHGLAEDGPIYVNAKQYHGILRRRQSRAKLEAQNKVIRNRKPYLHESRHIHAL

Query:  NRVRGSGGRFLSAKKNQPPDPNRITLPTTLRQKKDTPDFNNCSSETGDRDHSIMTATCSDISSISNGSVRFGQPNNRFSTISSNMGGRMEQYRGGGFVQG
        NRVRGSGGRFLSAKKNQPPDPNRITLPTTLRQKKDTPDFNNCSSETGDRDHSIMTATCSDISSISNGSVRFGQPNNRFSTISSNMGGRMEQYRGG FVQG
Subjt:  NRVRGSGGRFLSAKKNQPPDPNRITLPTTLRQKKDTPDFNNCSSETGDRDHSIMTATCSDISSISNGSVRFGQPNNRFSTISSNMGGRMEQYRGGGFVQG

Query:  ETRS
        ETRS
Subjt:  ETRS

A0A6J1G4P8 Nuclear transcription factor Y subunit7.2e-11474.15Show/hide
Query:  IPVALSDNITLKLETPAQPYHKQLGLELQDQESSTAHSTGQSLHKVCPMEAQNTQEQCVSSESGQDENCGESVENQMKSVILLSNPEFMFNSPQVDGCPS
        IP+ LSDN TLKLETP Q +HK LG +L DQESSTAHS G+SLHKVC ME QN QEQC+SSESGQ+ENCGESVENQMK +IL SNPEFMFNSPQVDG   
Subjt:  IPVALSDNITLKLETPAQPYHKQLGLELQDQESSTAHSTGQSLHKVCPMEAQNTQEQCVSSESGQDENCGESVENQMKSVILLSNPEFMFNSPQVDGCPS

Query:  SMARVSYPYIDPYYGGLLYGGYGQQAIHNQAQISSNVVGIAPARVPLPHGLAEDGPIYVNAKQYHGILRRRQSRAKLEAQNKVIRNRKPYLHESRHIHAL
         M RVSYPY+DPYYGGLL   Y QQAI+NQAQ+++NVVGIAPARVP+PH LAEDGPIYVNAKQYHGILRRRQSRAKLEAQN+VIRNRKPYLHESRH+HAL
Subjt:  SMARVSYPYIDPYYGGLLYGGYGQQAIHNQAQISSNVVGIAPARVPLPHGLAEDGPIYVNAKQYHGILRRRQSRAKLEAQNKVIRNRKPYLHESRHIHAL

Query:  NRVRGSGGRFLSAKKNQPPDPNRITLPTTLRQKKDTPDFNNCSSETGDRDHSIMTATCSDISSISNGSVRFGQPNNRFSTISSNMGGRMEQYRG
        NRVRGSGGRFLS+KKNQ   P + T  TTL Q+ +TPDF+ C SET DR  S    T     SISNGSVRFG+ +++ S +SS MGGRMEQY G
Subjt:  NRVRGSGGRFLSAKKNQPPDPNRITLPTTLRQKKDTPDFNNCSSETGDRDHSIMTATCSDISSISNGSVRFGQPNNRFSTISSNMGGRMEQYRG

A0A6J1KA88 Nuclear transcription factor Y subunit4.2e-11474.49Show/hide
Query:  IPVALSDNITLKLETPAQPYHKQLGLELQDQESSTAHSTGQSLHKVCPMEAQNTQEQCVSSESGQDENCGESVENQMKSVILLSNPEFMFNSPQVDGCPS
        IP+ LSDN TLKLETP Q +HK LG +L DQESSTAHS GQSLHKVC ME QN QEQC+SSESGQ+ENCGESVENQMK VIL SNPEFMF++PQVDG   
Subjt:  IPVALSDNITLKLETPAQPYHKQLGLELQDQESSTAHSTGQSLHKVCPMEAQNTQEQCVSSESGQDENCGESVENQMKSVILLSNPEFMFNSPQVDGCPS

Query:  SMARVSYPYIDPYYGGLLYGGYGQQAIHNQAQISSNVVGIAPARVPLPHGLAEDGPIYVNAKQYHGILRRRQSRAKLEAQNKVIRNRKPYLHESRHIHAL
         M RVSYPYIDPYYGGLL   Y QQAI+NQAQ+++NVVG+APARVP+PH LAEDGPIYVNAKQYHGILRRRQSRAKLE+QN+VIRNRKPYLHESRH+HAL
Subjt:  SMARVSYPYIDPYYGGLLYGGYGQQAIHNQAQISSNVVGIAPARVPLPHGLAEDGPIYVNAKQYHGILRRRQSRAKLEAQNKVIRNRKPYLHESRHIHAL

Query:  NRVRGSGGRFLSAKKNQPPDPNRITLPTTLRQKKDTPDFNNCSSETGDRDHSIMTATCSDISSISNGSVRFGQPNNRFSTISSNMGGRMEQYRG
        NRVRGSGGRFLS+KKNQ   P + T  TTL Q+ +TPDFN CSSET DR  S      S+I+SISNGSVRFG+ +++ S +SS MGG MEQY G
Subjt:  NRVRGSGGRFLSAKKNQPPDPNRITLPTTLRQKKDTPDFNNCSSETGDRDHSIMTATCSDISSISNGSVRFGQPNNRFSTISSNMGGRMEQYRG

A0A6J1KGE7 Nuclear transcription factor Y subunit4.2e-11474.49Show/hide
Query:  IPVALSDNITLKLETPAQPYHKQLGLELQDQESSTAHSTGQSLHKVCPMEAQNTQEQCVSSESGQDENCGESVENQMKSVILLSNPEFMFNSPQVDGCPS
        IP+ LSDN TLKLETP Q +HK LG +L DQESSTAHS GQSLHKVC ME QN QEQC+SSESGQ+ENCGESVENQMK VIL SNPEFMF++PQVDG   
Subjt:  IPVALSDNITLKLETPAQPYHKQLGLELQDQESSTAHSTGQSLHKVCPMEAQNTQEQCVSSESGQDENCGESVENQMKSVILLSNPEFMFNSPQVDGCPS

Query:  SMARVSYPYIDPYYGGLLYGGYGQQAIHNQAQISSNVVGIAPARVPLPHGLAEDGPIYVNAKQYHGILRRRQSRAKLEAQNKVIRNRKPYLHESRHIHAL
         M RVSYPYIDPYYGGLL   Y QQAI+NQAQ+++NVVG+APARVP+PH LAEDGPIYVNAKQYHGILRRRQSRAKLE+QN+VIRNRKPYLHESRH+HAL
Subjt:  SMARVSYPYIDPYYGGLLYGGYGQQAIHNQAQISSNVVGIAPARVPLPHGLAEDGPIYVNAKQYHGILRRRQSRAKLEAQNKVIRNRKPYLHESRHIHAL

Query:  NRVRGSGGRFLSAKKNQPPDPNRITLPTTLRQKKDTPDFNNCSSETGDRDHSIMTATCSDISSISNGSVRFGQPNNRFSTISSNMGGRMEQYRG
        NRVRGSGGRFLS+KKNQ   P + T  TTL Q+ +TPDFN CSSET DR  S      S+I+SISNGSVRFG+ +++ S +SS MGG MEQY G
Subjt:  NRVRGSGGRFLSAKKNQPPDPNRITLPTTLRQKKDTPDFNNCSSETGDRDHSIMTATCSDISSISNGSVRFGQPNNRFSTISSNMGGRMEQYRG

A0A6J1KIZ5 Nuclear transcription factor Y subunit4.2e-11474.49Show/hide
Query:  IPVALSDNITLKLETPAQPYHKQLGLELQDQESSTAHSTGQSLHKVCPMEAQNTQEQCVSSESGQDENCGESVENQMKSVILLSNPEFMFNSPQVDGCPS
        IP+ LSDN TLKLETP Q +HK LG +L DQESSTAHS GQSLHKVC ME QN QEQC+SSESGQ+ENCGESVENQMK VIL SNPEFMF++PQVDG   
Subjt:  IPVALSDNITLKLETPAQPYHKQLGLELQDQESSTAHSTGQSLHKVCPMEAQNTQEQCVSSESGQDENCGESVENQMKSVILLSNPEFMFNSPQVDGCPS

Query:  SMARVSYPYIDPYYGGLLYGGYGQQAIHNQAQISSNVVGIAPARVPLPHGLAEDGPIYVNAKQYHGILRRRQSRAKLEAQNKVIRNRKPYLHESRHIHAL
         M RVSYPYIDPYYGGLL   Y QQAI+NQAQ+++NVVG+APARVP+PH LAEDGPIYVNAKQYHGILRRRQSRAKLE+QN+VIRNRKPYLHESRH+HAL
Subjt:  SMARVSYPYIDPYYGGLLYGGYGQQAIHNQAQISSNVVGIAPARVPLPHGLAEDGPIYVNAKQYHGILRRRQSRAKLEAQNKVIRNRKPYLHESRHIHAL

Query:  NRVRGSGGRFLSAKKNQPPDPNRITLPTTLRQKKDTPDFNNCSSETGDRDHSIMTATCSDISSISNGSVRFGQPNNRFSTISSNMGGRMEQYRG
        NRVRGSGGRFLS+KKNQ   P + T  TTL Q+ +TPDFN CSSET DR  S      S+I+SISNGSVRFG+ +++ S +SS MGG MEQY G
Subjt:  NRVRGSGGRFLSAKKNQPPDPNRITLPTTLRQKKDTPDFNNCSSETGDRDHSIMTATCSDISSISNGSVRFGQPNNRFSTISSNMGGRMEQYRG

SwissProt top hitse value%identityAlignment
Q84JP1 Nuclear transcription factor Y subunit A-71.7e-2755.2Show/hide
Query:  GCPSSMARVSYPYIDPYYGGLL------YGGYGQQAIHNQAQISSNVVGIAPARVPLPHGLAEDGPIYVNAKQYHGILRRRQSRAKLEAQNKVIRNRKPY
        G  +SMA   YPY DPYY  +       Y G     +H Q      ++G+    VPLP    E+ P++VNAKQYHGILRRRQSRA+LE+QNKVI++RKPY
Subjt:  GCPSSMARVSYPYIDPYYGGLL------YGGYGQQAIHNQAQISSNVVGIAPARVPLPHGLAEDGPIYVNAKQYHGILRRRQSRAKLEAQNKVIRNRKPY

Query:  LHESRHIHALNRVRGSGGRFLSAKK
        LHESRH+HA+ R RG GGRFL+AKK
Subjt:  LHESRHIHALNRVRGSGGRFLSAKK

Q93ZH2 Nuclear transcription factor Y subunit A-32.9e-3537.95Show/hide
Query:  TLKLETPAQPYHKQL--GLELQDQESSTAHSTGQSLHKVCPMEAQNTQEQ-CVSSESGQDENCGESVENQMKSVILLSNPEFMFNSPQVDGCPSSMARVS
        +L L+  ++P H Q    +  QDQ+SS+  STGQS  +V      N   Q   S++SG +    +   +  K   +   P   F   Q        A  S
Subjt:  TLKLETPAQPYHKQL--GLELQDQESSTAHSTGQSLHKVCPMEAQNTQEQ-CVSSESGQDENCGESVENQMKSVILLSNPEFMFNSPQVDGCPSSMARVS

Query:  YPYIDPYYGGLLYGGYGQQAIHNQAQISSNVVGIAPARVPLPHGLAEDGPIYVNAKQYHGILRRRQSRAKLEAQNKVIRNRKPYLHESRHIHALNRVRGS
        + Y DP+YGGLL   Y  QA       +  +V + P RVPLP  L E  P++VNAKQYH I+RRRQ RAKLEAQNK+IR RKPYLHESRH+HAL R RGS
Subjt:  YPYIDPYYGGLLYGGYGQQAIHNQAQISSNVVGIAPARVPLPHGLAEDGPIYVNAKQYHGILRRRQSRAKLEAQNKVIRNRKPYLHESRHIHALNRVRGS

Query:  GGRFLSAKK-------NQPPDPNRITLPTTLRQKKDTPDFNNCSSETGDRDHSIMTATCSDISSISNGSVRFGQPNNRFSTISSNMG------GRMEQYR
        GGRFL+ KK           +  +  L   + +K +   F        ++D S  T + SDI+S+S+G+  FG    +FS   + +       G+     
Subjt:  GGRFLSAKK-------NQPPDPNRITLPTTLRQKKDTPDFNNCSSETGDRDHSIMTATCSDISSISNGSVRFGQPNNRFSTISSNMG------GRMEQYR

Query:  GGG
        GGG
Subjt:  GGG

Q9LNP6 Nuclear transcription factor Y subunit A-81.1e-2938.96Show/hide
Query:  LELQDQESSTAHSTGQSLHKVCPMEAQNTQEQCVSSESGQDENCGESVENQMKSVILLSNPEFMFNSPQVDGCPSSMARVSYPYIDPYYGGLLYGGYGQQ
        +  QDQ+SS+  S+ QS + V      N   Q   S     + C    E Q K   + S          +   PS  A  S+ Y DP++GGL+   Y  Q
Subjt:  LELQDQESSTAHSTGQSLHKVCPMEAQNTQEQCVSSESGQDENCGESVENQMKSVILLSNPEFMFNSPQVDGCPSSMARVSYPYIDPYYGGLLYGGYGQQ

Query:  AIHNQAQISSNVVGIAPARVPLPHGLAEDGPIYVNAKQYHGILRRRQSRAKLEAQNKVIRNRKPYLHESRHIHALNRVRGSGGRFLSAKKNQPPDPNRIT
        A     Q++         RVPLP  L E+ P++VNAKQ+H I+RRRQ RAKLEAQNK+I+ RKPYLHESRH+HAL R RGSGGRFL+ KK Q     +  
Subjt:  AIHNQAQISSNVVGIAPARVPLPHGLAEDGPIYVNAKQYHGILRRRQSRAKLEAQNKVIRNRKPYLHESRHIHALNRVRGSGGRFLSAKKNQPPDPNRIT

Query:  LPTTLRQKKDTPDFNN--CSSETGDRDHSIMTATCSDISSISNGSVRFG
        +P  ++Q+  T + +           D    T + SDI+S S+    FG
Subjt:  LPTTLRQKKDTPDFNN--CSSETGDRDHSIMTATCSDISSISNGSVRFG

Q9LVJ7 Nuclear transcription factor Y subunit A-61.1e-3138.01Show/hide
Query:  ALSDNITLKLETPAQPYHKQLGLELQDQESSTAHST-GQSLHKVCPMEAQNTQ---EQCVSSESGQDENCGESVENQMKSVILLSNPEFMFNSPQVDGCP
        +L+DN TL L        KQ G ++Q  +SS+  ST G+S  +V  +     +      V+  SG  EN     EN + S           +    D   
Subjt:  ALSDNITLKLETPAQPYHKQLGLELQDQESSTAHST-GQSLHKVCPMEAQNTQ---EQCVSSESGQDENCGESVENQMKSVILLSNPEFMFNSPQVDGCP

Query:  SSMARVSYPY---IDPYYGGLLYGGYGQQAIHNQAQISSNVVGIAPARVPLPHGLAEDGPIYVNAKQYHGILRRRQSRAKLEAQNKVIRNRKPYLHESRH
          +   S+P    + P++ G L   Y  Q      QI     G+ P+R+PLPH + E+ PI+VNAKQY  ILRRR+ RAKLEAQNK+I+ RKPYLHESRH
Subjt:  SSMARVSYPY---IDPYYGGLLYGGYGQQAIHNQAQISSNVVGIAPARVPLPHGLAEDGPIYVNAKQYHGILRRRQSRAKLEAQNKVIRNRKPYLHESRH

Query:  IHALNRVRGSGGRFLSAKKNQPPDPNRITLPTTLRQ----KKDTPDFNNCSSETGDRDHSIMTATCSDISSISNGSVRFGQPNNRFSTISSN
        +HAL RVRGSGGRFL+ KK+Q  + N    P  L      K     F       G    S+ T +CSDI+  +N  +    P  RFS   SN
Subjt:  IHALNRVRGSGGRFLSAKKNQPPDPNRITLPTTLRQ----KKDTPDFNNCSSETGDRDHSIMTATCSDISSISNGSVRFGQPNNRFSTISSN

Q9SYH4 Nuclear transcription factor Y subunit A-51.1e-2941.36Show/hide
Query:  LETPAQPYHKQLGLELQDQESSTAHST------------GQSLHKVCPMEAQNTQEQCVSSESGQDENCGESVENQMKSVILLSNPEFMFNSPQVDGCPS
        + T   P  K  GL+LQ+Q+S+++ ST            G+     C +   N         SG  EN G+ +EN  KS+   S    M +   V   P+
Subjt:  LETPAQPYHKQLGLELQDQESSTAHST------------GQSLHKVCPMEAQNTQEQCVSSESGQDENCGESVENQMKSVILLSNPEFMFNSPQVDGCPS

Query:  SMARVSYPY---IDPYYGGLLYGGYGQQAIHNQAQISSNVVGIAPARVPLPHGLAEDGPIYVNAKQYHGILRRRQSRAKLEAQNKVIRNRKPYLHESRHI
        S  ++S+        ++ G L   Y   A    A     ++G+  +RVPLPH + E+ PI+VNAKQYH ILRRR+ RAKLEAQNK+I+ RKPYLHESRH+
Subjt:  SMARVSYPY---IDPYYGGLLYGGYGQQAIHNQAQISSNVVGIAPARVPLPHGLAEDGPIYVNAKQYHGILRRRQSRAKLEAQNKVIRNRKPYLHESRHI

Query:  HALNRVRGSGGRFLSAKKNQ
        HAL R RGSGGRFL+ KK Q
Subjt:  HALNRVRGSGGRFLSAKKNQ

Arabidopsis top hitse value%identityAlignment
AT1G17590.1 nuclear factor Y, subunit A87.5e-3138.96Show/hide
Query:  LELQDQESSTAHSTGQSLHKVCPMEAQNTQEQCVSSESGQDENCGESVENQMKSVILLSNPEFMFNSPQVDGCPSSMARVSYPYIDPYYGGLLYGGYGQQ
        +  QDQ+SS+  S+ QS + V      N   Q   S     + C    E Q K   + S          +   PS  A  S+ Y DP++GGL+   Y  Q
Subjt:  LELQDQESSTAHSTGQSLHKVCPMEAQNTQEQCVSSESGQDENCGESVENQMKSVILLSNPEFMFNSPQVDGCPSSMARVSYPYIDPYYGGLLYGGYGQQ

Query:  AIHNQAQISSNVVGIAPARVPLPHGLAEDGPIYVNAKQYHGILRRRQSRAKLEAQNKVIRNRKPYLHESRHIHALNRVRGSGGRFLSAKKNQPPDPNRIT
        A     Q++         RVPLP  L E+ P++VNAKQ+H I+RRRQ RAKLEAQNK+I+ RKPYLHESRH+HAL R RGSGGRFL+ KK Q     +  
Subjt:  AIHNQAQISSNVVGIAPARVPLPHGLAEDGPIYVNAKQYHGILRRRQSRAKLEAQNKVIRNRKPYLHESRHIHALNRVRGSGGRFLSAKKNQPPDPNRIT

Query:  LPTTLRQKKDTPDFNN--CSSETGDRDHSIMTATCSDISSISNGSVRFG
        +P  ++Q+  T + +           D    T + SDI+S S+    FG
Subjt:  LPTTLRQKKDTPDFNN--CSSETGDRDHSIMTATCSDISSISNGSVRFG

AT1G54160.1 nuclear factor Y, subunit A57.5e-3141.36Show/hide
Query:  LETPAQPYHKQLGLELQDQESSTAHST------------GQSLHKVCPMEAQNTQEQCVSSESGQDENCGESVENQMKSVILLSNPEFMFNSPQVDGCPS
        + T   P  K  GL+LQ+Q+S+++ ST            G+     C +   N         SG  EN G+ +EN  KS+   S    M +   V   P+
Subjt:  LETPAQPYHKQLGLELQDQESSTAHST------------GQSLHKVCPMEAQNTQEQCVSSESGQDENCGESVENQMKSVILLSNPEFMFNSPQVDGCPS

Query:  SMARVSYPY---IDPYYGGLLYGGYGQQAIHNQAQISSNVVGIAPARVPLPHGLAEDGPIYVNAKQYHGILRRRQSRAKLEAQNKVIRNRKPYLHESRHI
        S  ++S+        ++ G L   Y   A    A     ++G+  +RVPLPH + E+ PI+VNAKQYH ILRRR+ RAKLEAQNK+I+ RKPYLHESRH+
Subjt:  SMARVSYPY---IDPYYGGLLYGGYGQQAIHNQAQISSNVVGIAPARVPLPHGLAEDGPIYVNAKQYHGILRRRQSRAKLEAQNKVIRNRKPYLHESRHI

Query:  HALNRVRGSGGRFLSAKKNQ
        HAL R RGSGGRFL+ KK Q
Subjt:  HALNRVRGSGGRFLSAKKNQ

AT1G72830.1 nuclear factor Y, subunit A32.0e-3637.95Show/hide
Query:  TLKLETPAQPYHKQL--GLELQDQESSTAHSTGQSLHKVCPMEAQNTQEQ-CVSSESGQDENCGESVENQMKSVILLSNPEFMFNSPQVDGCPSSMARVS
        +L L+  ++P H Q    +  QDQ+SS+  STGQS  +V      N   Q   S++SG +    +   +  K   +   P   F   Q        A  S
Subjt:  TLKLETPAQPYHKQL--GLELQDQESSTAHSTGQSLHKVCPMEAQNTQEQ-CVSSESGQDENCGESVENQMKSVILLSNPEFMFNSPQVDGCPSSMARVS

Query:  YPYIDPYYGGLLYGGYGQQAIHNQAQISSNVVGIAPARVPLPHGLAEDGPIYVNAKQYHGILRRRQSRAKLEAQNKVIRNRKPYLHESRHIHALNRVRGS
        + Y DP+YGGLL   Y  QA       +  +V + P RVPLP  L E  P++VNAKQYH I+RRRQ RAKLEAQNK+IR RKPYLHESRH+HAL R RGS
Subjt:  YPYIDPYYGGLLYGGYGQQAIHNQAQISSNVVGIAPARVPLPHGLAEDGPIYVNAKQYHGILRRRQSRAKLEAQNKVIRNRKPYLHESRHIHALNRVRGS

Query:  GGRFLSAKK-------NQPPDPNRITLPTTLRQKKDTPDFNNCSSETGDRDHSIMTATCSDISSISNGSVRFGQPNNRFSTISSNMG------GRMEQYR
        GGRFL+ KK           +  +  L   + +K +   F        ++D S  T + SDI+S+S+G+  FG    +FS   + +       G+     
Subjt:  GGRFLSAKK-------NQPPDPNRITLPTTLRQKKDTPDFNNCSSETGDRDHSIMTATCSDISSISNGSVRFGQPNNRFSTISSNMG------GRMEQYR

Query:  GGG
        GGG
Subjt:  GGG

AT1G72830.2 nuclear factor Y, subunit A35.0e-3537.83Show/hide
Query:  TLKLETPAQPYHKQL--GLELQDQESSTAHSTGQSLHKVCPMEAQNTQEQ-CVSSESGQDENCGESVENQMKSVILLSNPEFMFNSPQVDGCPSSMARVS
        +L L+  ++P H Q    +  QDQ+SS+  STGQS  +V      N   Q   S++SG +    +   +  K   +   P   F   Q        A  S
Subjt:  TLKLETPAQPYHKQL--GLELQDQESSTAHSTGQSLHKVCPMEAQNTQEQ-CVSSESGQDENCGESVENQMKSVILLSNPEFMFNSPQVDGCPSSMARVS

Query:  YPYIDPYYGGLLYGGYGQQAIHNQAQISSNVVGIAPARVPLPHGLAEDGPIYVNAKQYHGILRRRQSRAKLEAQNKVIRNRK-PYLHESRHIHALNRVRG
        + Y DP+YGGLL   Y  QA       +  +V + P RVPLP  L E  P++VNAKQYH I+RRRQ RAKLEAQNK+IR RK PYLHESRH+HAL R RG
Subjt:  YPYIDPYYGGLLYGGYGQQAIHNQAQISSNVVGIAPARVPLPHGLAEDGPIYVNAKQYHGILRRRQSRAKLEAQNKVIRNRK-PYLHESRHIHALNRVRG

Query:  SGGRFLSAKK-------NQPPDPNRITLPTTLRQKKDTPDFNNCSSETGDRDHSIMTATCSDISSISNGSVRFGQPNNRFSTISSNMG------GRMEQY
        SGGRFL+ KK           +  +  L   + +K +   F        ++D S  T + SDI+S+S+G+  FG    +FS   + +       G+    
Subjt:  SGGRFLSAKK-------NQPPDPNRITLPTTLRQKKDTPDFNNCSSETGDRDHSIMTATCSDISSISNGSVRFGQPNNRFSTISSNMG------GRMEQY

Query:  RGGG
         GGG
Subjt:  RGGG

AT3G14020.1 nuclear factor Y, subunit A68.0e-3338.01Show/hide
Query:  ALSDNITLKLETPAQPYHKQLGLELQDQESSTAHST-GQSLHKVCPMEAQNTQ---EQCVSSESGQDENCGESVENQMKSVILLSNPEFMFNSPQVDGCP
        +L+DN TL L        KQ G ++Q  +SS+  ST G+S  +V  +     +      V+  SG  EN     EN + S           +    D   
Subjt:  ALSDNITLKLETPAQPYHKQLGLELQDQESSTAHST-GQSLHKVCPMEAQNTQ---EQCVSSESGQDENCGESVENQMKSVILLSNPEFMFNSPQVDGCP

Query:  SSMARVSYPY---IDPYYGGLLYGGYGQQAIHNQAQISSNVVGIAPARVPLPHGLAEDGPIYVNAKQYHGILRRRQSRAKLEAQNKVIRNRKPYLHESRH
          +   S+P    + P++ G L   Y  Q      QI     G+ P+R+PLPH + E+ PI+VNAKQY  ILRRR+ RAKLEAQNK+I+ RKPYLHESRH
Subjt:  SSMARVSYPY---IDPYYGGLLYGGYGQQAIHNQAQISSNVVGIAPARVPLPHGLAEDGPIYVNAKQYHGILRRRQSRAKLEAQNKVIRNRKPYLHESRH

Query:  IHALNRVRGSGGRFLSAKKNQPPDPNRITLPTTLRQ----KKDTPDFNNCSSETGDRDHSIMTATCSDISSISNGSVRFGQPNNRFSTISSN
        +HAL RVRGSGGRFL+ KK+Q  + N    P  L      K     F       G    S+ T +CSDI+  +N  +    P  RFS   SN
Subjt:  IHALNRVRGSGGRFLSAKKNQPPDPNRITLPTTLRQ----KKDTPDFNNCSSETGDRDHSIMTATCSDISSISNGSVRFGQPNNRFSTISSN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATTCCAGTAGCTTTGTCTGATAATATAACTCTAAAACTTGAAACTCCCGCACAACCTTATCACAAGCAATTAGGCCTTGAGTTACAAGATCAGGAGTCATCCACAGCCCA
TTCAACTGGTCAATCTCTTCACAAAGTGTGTCCTATGGAAGCTCAAAATACTCAAGAGCAATGTGTTTCTTCAGAATCTGGTCAAGATGAAAATTGTGGCGAGAGTGTAG
AAAATCAGATGAAATCAGTTATTTTGCTTAGCAACCCTGAATTTATGTTCAATTCTCCCCAAGTTGATGGCTGCCCTTCTTCCATGGCTCGAGTGTCATACCCTTACATA
GATCCTTACTATGGCGGGCTTTTATACGGCGGCTATGGCCAGCAGGCTATTCATAATCAAGCTCAAATAAGTTCCAATGTTGTTGGAATTGCTCCTGCACGGGTCCCTTT
ACCGCATGGTCTCGCTGAAGATGGGCCGATATACGTCAATGCAAAACAATACCATGGAATCCTTAGAAGGAGGCAGTCTCGTGCAAAGCTTGAGGCTCAAAACAAAGTCA
TAAGAAACAGAAAGCCGTATCTTCACGAGTCTCGGCATATTCATGCACTGAACAGAGTGAGGGGATCTGGGGGACGCTTTCTCAGTGCGAAAAAGAATCAGCCGCCTGAT
CCCAATCGAATCACTCTTCCGACCACCCTGCGCCAGAAAAAAGACACTCCAGACTTCAATAATTGCAGCTCTGAAACTGGTGACCGTGATCATAGCATCATGACTGCAAC
ATGCTCTGATATCTCAAGCATCTCCAATGGTTCAGTACGGTTCGGGCAGCCCAACAACCGGTTCTCCACCATCTCTTCCAATATGGGTGGAAGAATGGAGCAATACAGGG
GTGGAGGCTTTGTGCAGGGCGAAACGCGGAGC
mRNA sequenceShow/hide mRNA sequence
ATTCCAGTAGCTTTGTCTGATAATATAACTCTAAAACTTGAAACTCCCGCACAACCTTATCACAAGCAATTAGGCCTTGAGTTACAAGATCAGGAGTCATCCACAGCCCA
TTCAACTGGTCAATCTCTTCACAAAGTGTGTCCTATGGAAGCTCAAAATACTCAAGAGCAATGTGTTTCTTCAGAATCTGGTCAAGATGAAAATTGTGGCGAGAGTGTAG
AAAATCAGATGAAATCAGTTATTTTGCTTAGCAACCCTGAATTTATGTTCAATTCTCCCCAAGTTGATGGCTGCCCTTCTTCCATGGCTCGAGTGTCATACCCTTACATA
GATCCTTACTATGGCGGGCTTTTATACGGCGGCTATGGCCAGCAGGCTATTCATAATCAAGCTCAAATAAGTTCCAATGTTGTTGGAATTGCTCCTGCACGGGTCCCTTT
ACCGCATGGTCTCGCTGAAGATGGGCCGATATACGTCAATGCAAAACAATACCATGGAATCCTTAGAAGGAGGCAGTCTCGTGCAAAGCTTGAGGCTCAAAACAAAGTCA
TAAGAAACAGAAAGCCGTATCTTCACGAGTCTCGGCATATTCATGCACTGAACAGAGTGAGGGGATCTGGGGGACGCTTTCTCAGTGCGAAAAAGAATCAGCCGCCTGAT
CCCAATCGAATCACTCTTCCGACCACCCTGCGCCAGAAAAAAGACACTCCAGACTTCAATAATTGCAGCTCTGAAACTGGTGACCGTGATCATAGCATCATGACTGCAAC
ATGCTCTGATATCTCAAGCATCTCCAATGGTTCAGTACGGTTCGGGCAGCCCAACAACCGGTTCTCCACCATCTCTTCCAATATGGGTGGAAGAATGGAGCAATACAGGG
GTGGAGGCTTTGTGCAGGGCGAAACGCGGAGC
Protein sequenceShow/hide protein sequence
IPVALSDNITLKLETPAQPYHKQLGLELQDQESSTAHSTGQSLHKVCPMEAQNTQEQCVSSESGQDENCGESVENQMKSVILLSNPEFMFNSPQVDGCPSSMARVSYPYI
DPYYGGLLYGGYGQQAIHNQAQISSNVVGIAPARVPLPHGLAEDGPIYVNAKQYHGILRRRQSRAKLEAQNKVIRNRKPYLHESRHIHALNRVRGSGGRFLSAKKNQPPD
PNRITLPTTLRQKKDTPDFNNCSSETGDRDHSIMTATCSDISSISNGSVRFGQPNNRFSTISSNMGGRMEQYRGGGFVQGETRS