; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS023727 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS023727
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: oxidative stress 3 .
Genome locationscaffold570:569330..569959
RNA-Seq ExpressionMS023727
SyntenyMS023727
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7021310.1 hypothetical protein SDJN02_17999, partial [Cucurbita argyrosperma subsp. argyrosperma]2.9e-5374.86Show/hide
Query:  MGGKEKL---EAFEAMELRELSWVIMKSGEDEVCEASISTMDSSSENSISSIESFSSELAEDASSSSTSNPSLSSFSPLSSSSGPLYELSELMANLPIKR
        MGGK+ +   EA++AMEL+ELS V++++ ED+VCEASIST     ENSISS ESFSSEL EDASS+STS+ SLSS S  S SSGPLYELSELMANLPIKR
Subjt:  MGGKEKL---EAFEAMELRELSWVIMKSGEDEVCEASISTMDSSSENSISSIESFSSELAEDASSSSTSNPSLSSFSPLSSSSGPLYELSELMANLPIKR

Query:  GLSKFYNGKSQSFTSLASAKSLEDLAKRV-NNNIIIPQRKKMKCCKSYGGGLDAQRSYSPKASIAKKPSKAVCKRNNRLFDSH
        GLSKFYNGKSQSFTSLASAKSLEDLAK+V NNN I  Q+KKMKCCKSYGGGLDAQRSYSPK  IAKK S    KR +RLF SH
Subjt:  GLSKFYNGKSQSFTSLASAKSLEDLAKRV-NNNIIIPQRKKMKCCKSYGGGLDAQRSYSPKASIAKKPSKAVCKRNNRLFDSH

XP_022154740.1 uncharacterized protein LOC111021921 [Momordica charantia]7.7e-8699.44Show/hide
Query:  MGGKEKLEAFEAMELRELSWVIMKSGEDEVCEASISTMDSSSENSISSIESFSSELAEDASSSSTSNPSLSSFSPLSSSSGPLYELSELMANLPIKRGLS
        +GGKEKLEAFEAMELRELSWVIMKSGEDEVCEASISTMDSSSENSISSIESFSSELAEDASSSSTSNPSLSSFSPLSSSSGPLYELSELMANLPIKRGLS
Subjt:  MGGKEKLEAFEAMELRELSWVIMKSGEDEVCEASISTMDSSSENSISSIESFSSELAEDASSSSTSNPSLSSFSPLSSSSGPLYELSELMANLPIKRGLS

Query:  KFYNGKSQSFTSLASAKSLEDLAKRVNNNIIIPQRKKMKCCKSYGGGLDAQRSYSPKASIAKKPSKAVCKRNNRLFDSH
        KFYNGKSQSFTSLASAKSLEDLAKRVNNNIIIPQRKKMKCCKSYGGGLDAQRSYSPKASIAKKPSKAVCKRNNRLFDSH
Subjt:  KFYNGKSQSFTSLASAKSLEDLAKRVNNNIIIPQRKKMKCCKSYGGGLDAQRSYSPKASIAKKPSKAVCKRNNRLFDSH

XP_022937494.1 uncharacterized protein LOC111443888 isoform X1 [Cucurbita moschata]5.9e-5475.96Show/hide
Query:  MGGKEKLEAFE---AMELRELSWVIMKSGEDEVCEASISTMDSSSENSISSIESFSSELAEDASSSSTSNPSLSSFSPLSSSSGPLYELSELMANLPIKR
        MGGK+ +EAFE   AMEL+ELS V++++ ED+VCEASIST     ENSISS ESFSSEL EDASS+STSN SLSS S  S SSGPLYELSELM NLPIKR
Subjt:  MGGKEKLEAFE---AMELRELSWVIMKSGEDEVCEASISTMDSSSENSISSIESFSSELAEDASSSSTSNPSLSSFSPLSSSSGPLYELSELMANLPIKR

Query:  GLSKFYNGKSQSFTSLASAKSLEDLAKRV-NNNIIIPQRKKMKCCKSYGGGLDAQRSYSPKASIAKKPSKAVCKRNNRLFDSH
        GLSKFYNGKSQSFTSLASAKSLEDLAK+V NNN I  Q+KKMKCCKSYGGGLDAQRSYSPK  IAKK S    KR +RLF SH
Subjt:  GLSKFYNGKSQSFTSLASAKSLEDLAKRV-NNNIIIPQRKKMKCCKSYGGGLDAQRSYSPKASIAKKPSKAVCKRNNRLFDSH

XP_022965955.1 uncharacterized protein LOC111465679 [Cucurbita maxima]5.9e-5475.27Show/hide
Query:  MGGKEKLEAF---EAMELRELSWVIMKSGEDEVCEASISTMDSSSENSISSIESFSSELAEDASSSSTSNPSLSSFSPLSSSSGPLYELSELMANLPIKR
        MGGK+ +EAF   EA+EL+ELS V++++ ED+VCEASIST     ENSISS ESFSSEL EDASS+STS+ SLSS S  S SSGPLYELSELMANLPIKR
Subjt:  MGGKEKLEAF---EAMELRELSWVIMKSGEDEVCEASISTMDSSSENSISSIESFSSELAEDASSSSTSNPSLSSFSPLSSSSGPLYELSELMANLPIKR

Query:  GLSKFYNGKSQSFTSLASAKSLEDLAKRVNNNIIIPQRKKMKCCKSYGGGLDAQRSYSPKASIAKKPSKAVCKRNNRLFDSH
        GLSKFYNGKSQSFTS+ASAKSLEDLAK+VNNN I  QRKKMK CKSYGGGLDAQRSYSPK  IAKK S    KR +RLF SH
Subjt:  GLSKFYNGKSQSFTSLASAKSLEDLAKRVNNNIIIPQRKKMKCCKSYGGGLDAQRSYSPKASIAKKPSKAVCKRNNRLFDSH

XP_038890684.1 uncharacterized protein LOC120080185 [Benincasa hispida]5.9e-5476.34Show/hide
Query:  MGGKEKLEAFEAMELRELSWVIMKSGEDEVCEASISTMDSSSENSISSIESFSSELAEDASSSS-TSNPSLSSFSP-LSSSSGPLYELSELMANLPIKRG
        MGGKEK+EAFEAMEL EL+WVIM++ E EV EAS ST+ SSSENSI+SIES SSEL EDASSSS  SN S  S SP LSSS GPLYELSELMANLPIKRG
Subjt:  MGGKEKLEAFEAMELRELSWVIMKSGEDEVCEASISTMDSSSENSISSIESFSSELAEDASSSS-TSNPSLSSFSP-LSSSSGPLYELSELMANLPIKRG

Query:  LSKFYNGKSQSFTSLASAKSLEDLAKRVNNNIIIPQRKKMKCCKSYGGGLDAQRS-YSPKASIAKKPSKA-----VCKRNN-RLFD
        LSKFYNGKSQSFTSLAS KSLEDLAKRVNNN  I QRKKMK CKSYGGGLDAQ+  YSPK  I+K+ SK      + KRNN RLFD
Subjt:  LSKFYNGKSQSFTSLASAKSLEDLAKRVNNNIIIPQRKKMKCCKSYGGGLDAQRS-YSPKASIAKKPSKA-----VCKRNN-RLFD

TrEMBL top hitse value%identityAlignment
A0A5A7V023 Suppressor protein SRP40-like1.7e-4672.31Show/hide
Query:  MGGKEK-LEAFEAMELRELSWVIMKSGEDEVCEA-SISTMDSSSENSISSIESFSSELAEDASSSS-TSNPSLS-SFSPLSSSS--GPLYELSELMANLP
        M GKE+ +E FEAMELREL+WVIM+S EDEV EA S ST+DSSS N   SIES +SEL EDASSSS TSN S S S SP  SSS  GPLYELSELMANLP
Subjt:  MGGKEK-LEAFEAMELRELSWVIMKSGEDEVCEA-SISTMDSSSENSISSIESFSSELAEDASSSS-TSNPSLS-SFSPLSSSS--GPLYELSELMANLP

Query:  IKRGLSKFYNGKSQSFTSLASAKSLEDLAKRV---NNNIIIPQRKKMKCCKSYGGGLDAQRS---YSPKASIAKKPSK------AVC-KRNNRLF
        IKRGLSKFYNGKSQSFTSLAS KSLEDLAKRV   NNN    QRKKMKCCKSYGG LDAQ+S   +SPK  IAKK SK      +VC KRNNR F
Subjt:  IKRGLSKFYNGKSQSFTSLASAKSLEDLAKRV---NNNIIIPQRKKMKCCKSYGGGLDAQRS---YSPKASIAKKPSK------AVC-KRNNRLF

A0A6J1DKH4 uncharacterized protein LOC1110219213.7e-8699.44Show/hide
Query:  MGGKEKLEAFEAMELRELSWVIMKSGEDEVCEASISTMDSSSENSISSIESFSSELAEDASSSSTSNPSLSSFSPLSSSSGPLYELSELMANLPIKRGLS
        +GGKEKLEAFEAMELRELSWVIMKSGEDEVCEASISTMDSSSENSISSIESFSSELAEDASSSSTSNPSLSSFSPLSSSSGPLYELSELMANLPIKRGLS
Subjt:  MGGKEKLEAFEAMELRELSWVIMKSGEDEVCEASISTMDSSSENSISSIESFSSELAEDASSSSTSNPSLSSFSPLSSSSGPLYELSELMANLPIKRGLS

Query:  KFYNGKSQSFTSLASAKSLEDLAKRVNNNIIIPQRKKMKCCKSYGGGLDAQRSYSPKASIAKKPSKAVCKRNNRLFDSH
        KFYNGKSQSFTSLASAKSLEDLAKRVNNNIIIPQRKKMKCCKSYGGGLDAQRSYSPKASIAKKPSKAVCKRNNRLFDSH
Subjt:  KFYNGKSQSFTSLASAKSLEDLAKRVNNNIIIPQRKKMKCCKSYGGGLDAQRSYSPKASIAKKPSKAVCKRNNRLFDSH

A0A6J1FAH9 uncharacterized protein LOC111443888 isoform X21.5e-5073.63Show/hide
Query:  MGGKEKLEAFE---AMELRELSWVIMKSGEDEVCEASISTMDSSSENSISSIESFSSELAEDASSSSTSNPSLSSFSPLSSSSGPLYELSELMANLPIKR
        MGGK+ +EAFE   AMEL+ELS V++++ ED+VCEASIST     ENSISS ESFSSEL EDASS+STSN SLSS S  S SSGPLYELSELM NLPIKR
Subjt:  MGGKEKLEAFE---AMELRELSWVIMKSGEDEVCEASISTMDSSSENSISSIESFSSELAEDASSSSTSNPSLSSFSPLSSSSGPLYELSELMANLPIKR

Query:  GLSKFYNGKSQSFTSLASAKSLEDLAKRVNNNIIIPQRKKMKCCKSYGGGLDAQRSYSPKASIAKKPSKAVCKRNNRLFDSH
        GLSKFYNGKSQSFTSLASAKSLEDLAK+V         KKMKCCKSYGGGLDAQRSYSPK  IAKK S    KR +RLF SH
Subjt:  GLSKFYNGKSQSFTSLASAKSLEDLAKRVNNNIIIPQRKKMKCCKSYGGGLDAQRSYSPKASIAKKPSKAVCKRNNRLFDSH

A0A6J1FBB9 uncharacterized protein LOC111443888 isoform X12.9e-5475.96Show/hide
Query:  MGGKEKLEAFE---AMELRELSWVIMKSGEDEVCEASISTMDSSSENSISSIESFSSELAEDASSSSTSNPSLSSFSPLSSSSGPLYELSELMANLPIKR
        MGGK+ +EAFE   AMEL+ELS V++++ ED+VCEASIST     ENSISS ESFSSEL EDASS+STSN SLSS S  S SSGPLYELSELM NLPIKR
Subjt:  MGGKEKLEAFE---AMELRELSWVIMKSGEDEVCEASISTMDSSSENSISSIESFSSELAEDASSSSTSNPSLSSFSPLSSSSGPLYELSELMANLPIKR

Query:  GLSKFYNGKSQSFTSLASAKSLEDLAKRV-NNNIIIPQRKKMKCCKSYGGGLDAQRSYSPKASIAKKPSKAVCKRNNRLFDSH
        GLSKFYNGKSQSFTSLASAKSLEDLAK+V NNN I  Q+KKMKCCKSYGGGLDAQRSYSPK  IAKK S    KR +RLF SH
Subjt:  GLSKFYNGKSQSFTSLASAKSLEDLAKRV-NNNIIIPQRKKMKCCKSYGGGLDAQRSYSPKASIAKKPSKAVCKRNNRLFDSH

A0A6J1HQ75 uncharacterized protein LOC1114656792.9e-5475.27Show/hide
Query:  MGGKEKLEAF---EAMELRELSWVIMKSGEDEVCEASISTMDSSSENSISSIESFSSELAEDASSSSTSNPSLSSFSPLSSSSGPLYELSELMANLPIKR
        MGGK+ +EAF   EA+EL+ELS V++++ ED+VCEASIST     ENSISS ESFSSEL EDASS+STS+ SLSS S  S SSGPLYELSELMANLPIKR
Subjt:  MGGKEKLEAF---EAMELRELSWVIMKSGEDEVCEASISTMDSSSENSISSIESFSSELAEDASSSSTSNPSLSSFSPLSSSSGPLYELSELMANLPIKR

Query:  GLSKFYNGKSQSFTSLASAKSLEDLAKRVNNNIIIPQRKKMKCCKSYGGGLDAQRSYSPKASIAKKPSKAVCKRNNRLFDSH
        GLSKFYNGKSQSFTS+ASAKSLEDLAK+VNNN I  QRKKMK CKSYGGGLDAQRSYSPK  IAKK S    KR +RLF SH
Subjt:  GLSKFYNGKSQSFTSLASAKSLEDLAKRVNNNIIIPQRKKMKCCKSYGGGLDAQRSYSPKASIAKKPSKAVCKRNNRLFDSH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G03170.1 unknown protein6.4e-0651.92Show/hide
Query:  KRGLSKFYNGKSQSFTSLASAKSLEDLAKRVNN-NIIIPQRKKMKCCKSYGG
        +RGLSK Y GKSQSFT+LA A ++EDLAK  N  N  + QR++   C+   G
Subjt:  KRGLSKFYNGKSQSFTSLASAKSLEDLAKRVNN-NIIIPQRKKMKCCKSYGG

AT3G43850.1 unknown protein7.1e-0537.5Show/hide
Query:  SSSTSNPSLSSFSP---------LSSSSGPLYELSELMANLPIKRGLSKFYNGKSQSFTSLASAKSL--EDLAKRVNNNIIIPQRKKMKCCKSYGGGLDA
        SSSTS+ S+   S           SS +GPL  +  L   LPIKR +SKFY GKS+SF SL+   SL  +DL K  N   +  +R++          L +
Subjt:  SSSTSNPSLSSFSP---------LSSSSGPLYELSELMANLPIKRGLSKFYNGKSQSFTSLASAKSL--EDLAKRVNNNIIIPQRKKMKCCKSYGGGLDA

Query:  QRSYSPKASIAKKPSKAVCKRNNRLFDS
         R  S +  I+KKP K+V   + R  DS
Subjt:  QRSYSPKASIAKKPSKAVCKRNNRLFDS

AT4G26288.1 FUNCTIONS IN: molecular_function unknown2.4e-1340Show/hide
Query:  MELRELSWVIMKSGEDEVCEASISTMDSSSENSISSIESFSSELAEDASSSSTSNPSLSSFSPLSSSSGPLYELSELMANLPI----KRGLSKFYNGKSQ
        M +R+ + +     E+ V   S S+   SS +SIS     SS+L EDASSSS+S+         SSS+GP  +LS+L++ LPI    K GLSK+Y GKSQ
Subjt:  MELRELSWVIMKSGEDEVCEASISTMDSSSENSISSIESFSSELAEDASSSSTSNPSLSSFSPLSSSSGPLYELSELMANLPI----KRGLSKFYNGKSQ

Query:  SFTSLASAKSLEDLAKRVNNNIIIPQRKKMKCCKSYGGGLDAQRSYSPKASIAKKPSKAVCKRNN
        SFTSLA+  SL+DL KR +        +   CCK           Y PKA+I+ K ++   K +N
Subjt:  SFTSLASAKSLEDLAKRVNNNIIIPQRKKMKCCKSYGGGLDAQRSYSPKASIAKKPSKAVCKRNN

AT5G56550.1 oxidative stress 31.1e-1646.85Show/hide
Query:  EDEVCEASISTMDSSSENSISSI-ESFSSELAEDASSSSTSNPSLSSFSPLSSSSGPLYELSELMANLPIKRGLSKFYNGKSQSFTSLASAKSLEDLAKR
        ED V E S +  D    +S  S+  S  S+  ED      S+         SSS+GPL +LS+LM++LPIKRGLSKFY GKSQSFTSL + KSLEDL KR
Subjt:  EDEVCEASISTMDSSSENSISSI-ESFSSELAEDASSSSTSNPSLSSFSPLSSSSGPLYELSELMANLPIKRGLSKFYNGKSQSFTSLASAKSLEDLAKR

Query:  VNNNIIIPQRKKMKCCKSYGGGLDA--QRSYSPKASIAKKPSK
           +       K K  +S GG LD   +R +SPKA+I+KKP++
Subjt:  VNNNIIIPQRKKMKCCKSYGGGLDA--QRSYSPKASIAKKPSK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGGCAAAGAAAAGCTTGAAGCTTTTGAAGCTATGGAGTTGAGGGAACTCAGTTGGGTAATCATGAAAAGTGGAGAAGATGAAGTTTGTGAAGCTTCTATCTCCAC
CATGGATTCTTCTTCGGAGAACTCGATCAGCTCAATTGAATCTTTTTCATCGGAATTGGCTGAAGATGCATCATCTTCTTCTACTTCAAACCCTTCATTATCGTCATTCT
CGCCGTTATCATCGTCGAGTGGACCTCTCTATGAGCTCTCAGAGCTGATGGCCAATCTCCCCATCAAGAGAGGGCTATCCAAATTCTATAATGGGAAATCACAATCTTTT
ACATCTCTAGCAAGTGCAAAGAGCTTGGAAGATCTTGCAAAGAGAGTGAATAATAATATTATTATTCCTCAAAGGAAAAAGATGAAGTGTTGTAAAAGCTATGGAGGAGG
GTTAGATGCTCAAAGATCTTATTCTCCAAAGGCTTCCATTGCTAAAAAACCTTCAAAGGCAGTTTGTAAGAGAAATAATAGGTTATTTGACAGCCAT
mRNA sequenceShow/hide mRNA sequence
ATGGGAGGCAAAGAAAAGCTTGAAGCTTTTGAAGCTATGGAGTTGAGGGAACTCAGTTGGGTAATCATGAAAAGTGGAGAAGATGAAGTTTGTGAAGCTTCTATCTCCAC
CATGGATTCTTCTTCGGAGAACTCGATCAGCTCAATTGAATCTTTTTCATCGGAATTGGCTGAAGATGCATCATCTTCTTCTACTTCAAACCCTTCATTATCGTCATTCT
CGCCGTTATCATCGTCGAGTGGACCTCTCTATGAGCTCTCAGAGCTGATGGCCAATCTCCCCATCAAGAGAGGGCTATCCAAATTCTATAATGGGAAATCACAATCTTTT
ACATCTCTAGCAAGTGCAAAGAGCTTGGAAGATCTTGCAAAGAGAGTGAATAATAATATTATTATTCCTCAAAGGAAAAAGATGAAGTGTTGTAAAAGCTATGGAGGAGG
GTTAGATGCTCAAAGATCTTATTCTCCAAAGGCTTCCATTGCTAAAAAACCTTCAAAGGCAGTTTGTAAGAGAAATAATAGGTTATTTGACAGCCAT
Protein sequenceShow/hide protein sequence
MGGKEKLEAFEAMELRELSWVIMKSGEDEVCEASISTMDSSSENSISSIESFSSELAEDASSSSTSNPSLSSFSPLSSSSGPLYELSELMANLPIKRGLSKFYNGKSQSF
TSLASAKSLEDLAKRVNNNIIIPQRKKMKCCKSYGGGLDAQRSYSPKASIAKKPSKAVCKRNNRLFDSH