; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS023764 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS023764
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionYrdC-like domain-containing protein
Genome locationscaffold486:130189..133477
RNA-Seq ExpressionMS023764
SyntenyMS023764
Gene Ontology termsGO:0006351 - transcription, DNA-templated (biological process)
GO:0006450 - regulation of translational fidelity (biological process)
GO:0005666 - RNA polymerase III complex (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0000049 - tRNA binding (molecular function)
GO:0003677 - DNA binding (molecular function)
GO:0003725 - double-stranded RNA binding (molecular function)
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR006070 - YrdC-like domain
IPR017945 - DHBP synthase RibB-like alpha/beta domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022156689.1 yrdC domain-containing protein, mitochondrial [Momordica charantia]2.1e-13798.81Show/hide
Query:  MVESFSLFRTFATFPSSQPGVPNYGLVPFLNQNRGSRVSFSKMTWSLEKCRTRVDNSLQAICPASEAFAQEAVEALKAGKVIAVPTDTLYGLACDACSLE
        MVESFSLFRTFATFPSSQ GVPNYGLVPFL+QNRGSRVSFSKMTWSLEKCRTRVDNSLQAICPASEAFAQ AVEALKAGKVIAVPTDTLYGLACDACSLE
Subjt:  MVESFSLFRTFATFPSSQPGVPNYGLVPFLNQNRGSRVSFSKMTWSLEKCRTRVDNSLQAICPASEAFAQEAVEALKAGKVIAVPTDTLYGLACDACSLE

Query:  AVNRIYEIKGRKLTSPLAICVGDVADITRFAVIDHLPPGLLDSLLPGPVTVVLKRGESSTLEKSLNPGLDSVGVRVPDYDFIRLISRKSKTALALTSANL
        AVNRIYEIKGRKLTSPLAICVGDVADITRFAVIDHLPPGLLDSLLPGPVTVVLKRGESSTLEKSLNPGLDSVGVRVPDYDFIRLISRKSKTALALTSANL
Subjt:  AVNRIYEIKGRKLTSPLAICVGDVADITRFAVIDHLPPGLLDSLLPGPVTVVLKRGESSTLEKSLNPGLDSVGVRVPDYDFIRLISRKSKTALALTSANL

Query:  SGQPSSVCINDFESIWPHCAYVYDGGVLPAGRAGSTIIDLTKKGTFKIIRAG
        SGQPSSVCINDFESIWPHCAYVYDGGVLPAGRAGSTIIDLTKKGTFKIIRAG
Subjt:  SGQPSSVCINDFESIWPHCAYVYDGGVLPAGRAGSTIIDLTKKGTFKIIRAG

XP_022948702.1 yrdC domain-containing protein, mitochondrial [Cucurbita moschata]6.3e-11884.52Show/hide
Query:  MVESFSLFRTFATFPSSQPGVPNYGLVPFLNQNRGSRVSFSKMTWSLEKCRTRVDNSLQAICPASEAFAQEAVEALKAGKVIAVPTDTLYGLACDACSLE
        MVE  S+ RTFATFPSSQ G P+YG V FL+ NRGSR++F K  WSLEKC  RV+NSLQA+ PASEAFAQEA+EALKAGKVIAVPTDTLYGLACDACS E
Subjt:  MVESFSLFRTFATFPSSQPGVPNYGLVPFLNQNRGSRVSFSKMTWSLEKCRTRVDNSLQAICPASEAFAQEAVEALKAGKVIAVPTDTLYGLACDACSLE

Query:  AVNRIYEIKGRKLTSPLAICVGDVADITRFAVIDHLPPGLLDSLLPGPVTVVLKRGESSTLEKSLNPGLDSVGVRVPDYDFIRLISRKSKTALALTSANL
        AVNRIYEIKGRKLTSPLAICVGDV+DITRFAV DHLP GLLDSLLPGPVTVVLKRGESS LEKSLNPGL+S+GVRVPD DFIRLISR+S TALALTSANL
Subjt:  AVNRIYEIKGRKLTSPLAICVGDVADITRFAVIDHLPPGLLDSLLPGPVTVVLKRGESSTLEKSLNPGLDSVGVRVPDYDFIRLISRKSKTALALTSANL

Query:  SGQPSSVCINDFESIWPHCAYVYDGGVLPAGRAGSTIIDLTKKGTFKIIRAG
        SGQPSSVC++DFE++W HCAYVYDGG+LPAGRAGSTIIDLTK+GTFKIIRAG
Subjt:  SGQPSSVCINDFESIWPHCAYVYDGGVLPAGRAGSTIIDLTKKGTFKIIRAG

XP_022998259.1 yrdC domain-containing protein, mitochondrial [Cucurbita maxima]6.3e-11885.32Show/hide
Query:  MVESFSLFRTFATFPSSQPGVPNYGLVPFLNQNRGSRVSFSKMTWSLEKCRTRVDNSLQAICPASEAFAQEAVEALKAGKVIAVPTDTLYGLACDACSLE
        MVE  SL RTFATFPSSQ G PNYG V FL+ NRGSR++F K  WSLEKC  RV+NSLQA+ PASEAFAQEA EALKAGKVIAVPTDTLYGLACDACS E
Subjt:  MVESFSLFRTFATFPSSQPGVPNYGLVPFLNQNRGSRVSFSKMTWSLEKCRTRVDNSLQAICPASEAFAQEAVEALKAGKVIAVPTDTLYGLACDACSLE

Query:  AVNRIYEIKGRKLTSPLAICVGDVADITRFAVIDHLPPGLLDSLLPGPVTVVLKRGESSTLEKSLNPGLDSVGVRVPDYDFIRLISRKSKTALALTSANL
        AVNRIYEIKGRKLTSPLAICVGDV+DITRFAV DHLP GLLDSLLPGPVTVVLKRGESS LEKSLNPGL+S+GVRVPD DFIRLISR+S TALALTSANL
Subjt:  AVNRIYEIKGRKLTSPLAICVGDVADITRFAVIDHLPPGLLDSLLPGPVTVVLKRGESSTLEKSLNPGLDSVGVRVPDYDFIRLISRKSKTALALTSANL

Query:  SGQPSSVCINDFESIWPHCAYVYDGGVLPAGRAGSTIIDLTKKGTFKIIRAG
        SG+PSSVC+NDFE++W HCAYVYDGGVLPAGRAGSTIIDLTK+G FKIIRAG
Subjt:  SGQPSSVCINDFESIWPHCAYVYDGGVLPAGRAGSTIIDLTKKGTFKIIRAG

XP_023521571.1 yrdC domain-containing protein, mitochondrial-like [Cucurbita pepo subsp. pepo]4.4e-11986.11Show/hide
Query:  MVESFSLFRTFATFPSSQPGVPNYGLVPFLNQNRGSRVSFSKMTWSLEKCRTRVDNSLQAICPASEAFAQEAVEALKAGKVIAVPTDTLYGLACDACSLE
        MVE  SL RTFATFPSSQ G PNYG V FL+ NRGSR++F K  WSLEKC  RV+NSLQA+ PASEAFAQEA EALKAGKVIAVPTDTLYGLACDACS E
Subjt:  MVESFSLFRTFATFPSSQPGVPNYGLVPFLNQNRGSRVSFSKMTWSLEKCRTRVDNSLQAICPASEAFAQEAVEALKAGKVIAVPTDTLYGLACDACSLE

Query:  AVNRIYEIKGRKLTSPLAICVGDVADITRFAVIDHLPPGLLDSLLPGPVTVVLKRGESSTLEKSLNPGLDSVGVRVPDYDFIRLISRKSKTALALTSANL
        AVNRIYEIKGRKLTSPLAICVGDV+DITRFAV DHLP GLLDSLLPGPVTVVLKRGESS LEKSLNPGL+S+GVRVPD DFIRLISR+S TALALTSANL
Subjt:  AVNRIYEIKGRKLTSPLAICVGDVADITRFAVIDHLPPGLLDSLLPGPVTVVLKRGESSTLEKSLNPGLDSVGVRVPDYDFIRLISRKSKTALALTSANL

Query:  SGQPSSVCINDFESIWPHCAYVYDGGVLPAGRAGSTIIDLTKKGTFKIIRAG
        SGQPSSVC+NDFE++W HCAYVYDGGVLPAGRAGSTIIDLTK+GTFKIIRAG
Subjt:  SGQPSSVCINDFESIWPHCAYVYDGGVLPAGRAGSTIIDLTKKGTFKIIRAG

XP_038893581.1 yrdC domain-containing protein, mitochondrial isoform X1 [Benincasa hispida]2.8e-11885.32Show/hide
Query:  MVESFSLFRTFATFPSSQPGVPNYGLVPFLNQNRGSRVSFSKMTWSLEKCRTRVDNSLQAICPASEAFAQEAVEALKAGKVIAVPTDTLYGLACDACSLE
        MVES SL RTF TFPSS  G PNYGLV FL QNRGSRVSF K TWSLEKC  RV+N LQA+ PASEAFAQEA +ALKAGKVIAVPTDTLYGLACDACS E
Subjt:  MVESFSLFRTFATFPSSQPGVPNYGLVPFLNQNRGSRVSFSKMTWSLEKCRTRVDNSLQAICPASEAFAQEAVEALKAGKVIAVPTDTLYGLACDACSLE

Query:  AVNRIYEIKGRKLTSPLAICVGDVADITRFAVIDHLPPGLLDSLLPGPVTVVLKRGESSTLEKSLNPGLDSVGVRVPDYDFIRLISRKSKTALALTSANL
        AV+RIYEIKGRKLTSPLAICVGDV+DITRFAV DHLP GLLDSLLPGPVTVVLKRGE+S LEKSLNPGLDS+GVRVPD DFIRLISR+S+TALALTSANL
Subjt:  AVNRIYEIKGRKLTSPLAICVGDVADITRFAVIDHLPPGLLDSLLPGPVTVVLKRGESSTLEKSLNPGLDSVGVRVPDYDFIRLISRKSKTALALTSANL

Query:  SGQPSSVCINDFESIWPHCAYVYDGGVLPAGRAGSTIIDLTKKGTFKIIRAG
        SGQPSSVC+NDFE++W HCAYVYDGGVLPAGRAGSTIIDLT++GT+KI+RAG
Subjt:  SGQPSSVCINDFESIWPHCAYVYDGGVLPAGRAGSTIIDLTKKGTFKIIRAG

TrEMBL top hitse value%identityAlignment
A0A0A0LUP4 YrdC-like domain-containing protein9.8e-11784.13Show/hide
Query:  MVESFSLFRTFATFPSSQPGVPNYGLVPFLNQNRGSRVSFSKMTWSLEKCRTRVDNSLQAICPASEAFAQEAVEALKAGKVIAVPTDTLYGLACDACSLE
        M +S SL RTF TFPSSQ G  NYG+V FL +NRGSRVSF K  WSLEKC  RV+N LQA+ PASEAFAQEA +ALKAGKVIAVPTDTLYGLACDACS E
Subjt:  MVESFSLFRTFATFPSSQPGVPNYGLVPFLNQNRGSRVSFSKMTWSLEKCRTRVDNSLQAICPASEAFAQEAVEALKAGKVIAVPTDTLYGLACDACSLE

Query:  AVNRIYEIKGRKLTSPLAICVGDVADITRFAVIDHLPPGLLDSLLPGPVTVVLKRGESSTLEKSLNPGLDSVGVRVPDYDFIRLISRKSKTALALTSANL
        AV+RIYEIKGRKLTSPLAICVGDV+DITRFAV DHLP GLLDSLLPGPVTVVLKRGESS L+KSLNPGLDS+GVRVPD DFIRLISR+S+TALALTSANL
Subjt:  AVNRIYEIKGRKLTSPLAICVGDVADITRFAVIDHLPPGLLDSLLPGPVTVVLKRGESSTLEKSLNPGLDSVGVRVPDYDFIRLISRKSKTALALTSANL

Query:  SGQPSSVCINDFESIWPHCAYVYDGGVLPAGRAGSTIIDLTKKGTFKIIRAG
        SGQPSSVC+NDFE++W HCAYVYDGGVLPAGRAGSTIIDLT++GTFKIIRAG
Subjt:  SGQPSSVCINDFESIWPHCAYVYDGGVLPAGRAGSTIIDLTKKGTFKIIRAG

A0A5A7T5W1 YrdC domain-containing protein2.0e-11482.14Show/hide
Query:  MVESFSLFRTFATFPSSQPGVPNYGLVPFLNQNRGSRVSFSKMTWSLEKCRTRVDNSLQAICPASEAFAQEAVEALKAGKVIAVPTDTLYGLACDACSLE
        M +S SL RTFATFPSS  G  NYG+V FL +NRGSRVSF K  WSLEKC   V+N LQA+ PASEAFAQEA +ALKAGKVIAVPTDTLYGLACDACS E
Subjt:  MVESFSLFRTFATFPSSQPGVPNYGLVPFLNQNRGSRVSFSKMTWSLEKCRTRVDNSLQAICPASEAFAQEAVEALKAGKVIAVPTDTLYGLACDACSLE

Query:  AVNRIYEIKGRKLTSPLAICVGDVADITRFAVIDHLPPGLLDSLLPGPVTVVLKRGESSTLEKSLNPGLDSVGVRVPDYDFIRLISRKSKTALALTSANL
        AV+RIYEIKGRKLTSPLAICVG V+DITR+A+ DHLP GLLDSLLPGPVTVVLKRGESS L+KSLNPGLDS+GVRVPD DFIRLISR+S+TALALTSANL
Subjt:  AVNRIYEIKGRKLTSPLAICVGDVADITRFAVIDHLPPGLLDSLLPGPVTVVLKRGESSTLEKSLNPGLDSVGVRVPDYDFIRLISRKSKTALALTSANL

Query:  SGQPSSVCINDFESIWPHCAYVYDGGVLPAGRAGSTIIDLTKKGTFKIIRAG
        SGQPSSVC+NDFE++W HCAYVYDGGVLPAGRAGSTI+DLT++GTFKIIRAG
Subjt:  SGQPSSVCINDFESIWPHCAYVYDGGVLPAGRAGSTIIDLTKKGTFKIIRAG

A0A6J1DUA4 yrdC domain-containing protein, mitochondrial1.0e-13798.81Show/hide
Query:  MVESFSLFRTFATFPSSQPGVPNYGLVPFLNQNRGSRVSFSKMTWSLEKCRTRVDNSLQAICPASEAFAQEAVEALKAGKVIAVPTDTLYGLACDACSLE
        MVESFSLFRTFATFPSSQ GVPNYGLVPFL+QNRGSRVSFSKMTWSLEKCRTRVDNSLQAICPASEAFAQ AVEALKAGKVIAVPTDTLYGLACDACSLE
Subjt:  MVESFSLFRTFATFPSSQPGVPNYGLVPFLNQNRGSRVSFSKMTWSLEKCRTRVDNSLQAICPASEAFAQEAVEALKAGKVIAVPTDTLYGLACDACSLE

Query:  AVNRIYEIKGRKLTSPLAICVGDVADITRFAVIDHLPPGLLDSLLPGPVTVVLKRGESSTLEKSLNPGLDSVGVRVPDYDFIRLISRKSKTALALTSANL
        AVNRIYEIKGRKLTSPLAICVGDVADITRFAVIDHLPPGLLDSLLPGPVTVVLKRGESSTLEKSLNPGLDSVGVRVPDYDFIRLISRKSKTALALTSANL
Subjt:  AVNRIYEIKGRKLTSPLAICVGDVADITRFAVIDHLPPGLLDSLLPGPVTVVLKRGESSTLEKSLNPGLDSVGVRVPDYDFIRLISRKSKTALALTSANL

Query:  SGQPSSVCINDFESIWPHCAYVYDGGVLPAGRAGSTIIDLTKKGTFKIIRAG
        SGQPSSVCINDFESIWPHCAYVYDGGVLPAGRAGSTIIDLTKKGTFKIIRAG
Subjt:  SGQPSSVCINDFESIWPHCAYVYDGGVLPAGRAGSTIIDLTKKGTFKIIRAG

A0A6J1G9Z7 yrdC domain-containing protein, mitochondrial3.0e-11884.52Show/hide
Query:  MVESFSLFRTFATFPSSQPGVPNYGLVPFLNQNRGSRVSFSKMTWSLEKCRTRVDNSLQAICPASEAFAQEAVEALKAGKVIAVPTDTLYGLACDACSLE
        MVE  S+ RTFATFPSSQ G P+YG V FL+ NRGSR++F K  WSLEKC  RV+NSLQA+ PASEAFAQEA+EALKAGKVIAVPTDTLYGLACDACS E
Subjt:  MVESFSLFRTFATFPSSQPGVPNYGLVPFLNQNRGSRVSFSKMTWSLEKCRTRVDNSLQAICPASEAFAQEAVEALKAGKVIAVPTDTLYGLACDACSLE

Query:  AVNRIYEIKGRKLTSPLAICVGDVADITRFAVIDHLPPGLLDSLLPGPVTVVLKRGESSTLEKSLNPGLDSVGVRVPDYDFIRLISRKSKTALALTSANL
        AVNRIYEIKGRKLTSPLAICVGDV+DITRFAV DHLP GLLDSLLPGPVTVVLKRGESS LEKSLNPGL+S+GVRVPD DFIRLISR+S TALALTSANL
Subjt:  AVNRIYEIKGRKLTSPLAICVGDVADITRFAVIDHLPPGLLDSLLPGPVTVVLKRGESSTLEKSLNPGLDSVGVRVPDYDFIRLISRKSKTALALTSANL

Query:  SGQPSSVCINDFESIWPHCAYVYDGGVLPAGRAGSTIIDLTKKGTFKIIRAG
        SGQPSSVC++DFE++W HCAYVYDGG+LPAGRAGSTIIDLTK+GTFKIIRAG
Subjt:  SGQPSSVCINDFESIWPHCAYVYDGGVLPAGRAGSTIIDLTKKGTFKIIRAG

A0A6J1KDV4 yrdC domain-containing protein, mitochondrial3.0e-11885.32Show/hide
Query:  MVESFSLFRTFATFPSSQPGVPNYGLVPFLNQNRGSRVSFSKMTWSLEKCRTRVDNSLQAICPASEAFAQEAVEALKAGKVIAVPTDTLYGLACDACSLE
        MVE  SL RTFATFPSSQ G PNYG V FL+ NRGSR++F K  WSLEKC  RV+NSLQA+ PASEAFAQEA EALKAGKVIAVPTDTLYGLACDACS E
Subjt:  MVESFSLFRTFATFPSSQPGVPNYGLVPFLNQNRGSRVSFSKMTWSLEKCRTRVDNSLQAICPASEAFAQEAVEALKAGKVIAVPTDTLYGLACDACSLE

Query:  AVNRIYEIKGRKLTSPLAICVGDVADITRFAVIDHLPPGLLDSLLPGPVTVVLKRGESSTLEKSLNPGLDSVGVRVPDYDFIRLISRKSKTALALTSANL
        AVNRIYEIKGRKLTSPLAICVGDV+DITRFAV DHLP GLLDSLLPGPVTVVLKRGESS LEKSLNPGL+S+GVRVPD DFIRLISR+S TALALTSANL
Subjt:  AVNRIYEIKGRKLTSPLAICVGDVADITRFAVIDHLPPGLLDSLLPGPVTVVLKRGESSTLEKSLNPGLDSVGVRVPDYDFIRLISRKSKTALALTSANL

Query:  SGQPSSVCINDFESIWPHCAYVYDGGVLPAGRAGSTIIDLTKKGTFKIIRAG
        SG+PSSVC+NDFE++W HCAYVYDGGVLPAGRAGSTIIDLTK+G FKIIRAG
Subjt:  SGQPSSVCINDFESIWPHCAYVYDGGVLPAGRAGSTIIDLTKKGTFKIIRAG

SwissProt top hitse value%identityAlignment
Q0VC80 YrdC domain-containing protein, mitochondrial1.6e-4449.46Show/hide
Query:  AVEALKAGKVIAVPTDTLYGLACDACSLEAVNRIYEIKGRKLTSPLAICVGDVADITRFAVIDHLPPGLLDSLLPGPVTVVLKRGESSTLEKSLNPGLDS
        AV  L+AG V+AVPTDTLYGLAC A   EA+  +Y +KGR  T PLA+C+G VAD+ R+  +  +P GLL  LLPGPVT+V++R E   L K LNP    
Subjt:  AVEALKAGKVIAVPTDTLYGLACDACSLEAVNRIYEIKGRKLTSPLAICVGDVADITRFAVIDHLPPGLLDSLLPGPVTVVLKRGESSTLEKSLNPGLDS

Query:  VGVRVPDYDFIRLISRKSKTALALTSANLSGQPSSVCINDFESIWPHCAYVYDGGVL-----PAGRAGSTIIDLTKKGTFKIIRAG
        VG+R+PD+ F++ +++     LALTSANLS Q SS+ + +F+ +WPH + + DGG +     P  R GST++DL+  G F IIR G
Subjt:  VGVRVPDYDFIRLISRKSKTALALTSANLSGQPSSVCINDFESIWPHCAYVYDGGVL-----PAGRAGSTIIDLTKKGTFKIIRAG

Q3U5F4 YrdC domain-containing protein, mitochondrial2.0e-4248.39Show/hide
Query:  AVEALKAGKVIAVPTDTLYGLACDACSLEAVNRIYEIKGRKLTSPLAICVGDVADITRFAVIDHLPPGLLDSLLPGPVTVVLKRGESSTLEKSLNPGLDS
        AV  L+AG V+AVPTDTLYGLAC A S  A++ +Y +KGR    PLA+C+G VAD+ R+  +  +P  LL+ L PGPVT+V++R E   L K LNP    
Subjt:  AVEALKAGKVIAVPTDTLYGLACDACSLEAVNRIYEIKGRKLTSPLAICVGDVADITRFAVIDHLPPGLLDSLLPGPVTVVLKRGESSTLEKSLNPGLDS

Query:  VGVRVPDYDFIRLISRKSKTALALTSANLSGQPSSVCINDFESIWPHCAYVYDGGVL-----PAGRAGSTIIDLTKKGTFKIIRAG
        VG+R+PD+ F+  +++     LALTSANLS Q SS+ + +F+ +WPH + V DGG +     P  R GST++DL+  G F IIR G
Subjt:  VGVRVPDYDFIRLISRKSKTALALTSANLSGQPSSVCINDFESIWPHCAYVYDGGVL-----PAGRAGSTIIDLTKKGTFKIIRAG

Q499R4 YrdC domain-containing protein, mitochondrial3.4e-4247.85Show/hide
Query:  AVEALKAGKVIAVPTDTLYGLACDACSLEAVNRIYEIKGRKLTSPLAICVGDVADITRFAVIDHLPPGLLDSLLPGPVTVVLKRGESSTLEKSLNPGLDS
        AV  L+AG V+AVPTDTLYGLAC A    A++ +Y +KGR    PLA+C+G VAD+ R+  +  +P  LL+ L PGPVT+V++R E   L K LNP    
Subjt:  AVEALKAGKVIAVPTDTLYGLACDACSLEAVNRIYEIKGRKLTSPLAICVGDVADITRFAVIDHLPPGLLDSLLPGPVTVVLKRGESSTLEKSLNPGLDS

Query:  VGVRVPDYDFIRLISRKSKTALALTSANLSGQPSSVCINDFESIWPHCAYVYDGGVL-----PAGRAGSTIIDLTKKGTFKIIRAG
        VG+R+PD+ F+  +++     LALTSANLS Q SS+ + +F+ +WPH + V DGG +     P  R GST++DL+  G F IIR+G
Subjt:  VGVRVPDYDFIRLISRKSKTALALTSANLSGQPSSVCINDFESIWPHCAYVYDGGVL-----PAGRAGSTIIDLTKKGTFKIIRAG

Q60369 Putative threonylcarbamoyl-AMP synthase1.7e-2032.65Show/hide
Query:  NSLQAICPASEAFAQEAVEALKA----GKVIAVPTDTLYGLACDACSLEAVNRIYEIKGRKLTSPLAICVGDVADITRFAVIDHLPPGLLDSLLPGPVTV
        N +  I   +E   ++ +E LK     GK++   TDTLYG++ +A + +AV ++Y IK R+   PL+ICV D  +I ++A ++ L   ++D  LPGP+T+
Subjt:  NSLQAICPASEAFAQEAVEALKA----GKVIAVPTDTLYGLACDACSLEAVNRIYEIKGRKLTSPLAICVGDVADITRFAVIDHLPPGLLDSLLPGPVTV

Query:  VLKRGESSTLEKSLNPGL------DSVGVRVPDYDFIRLISRKSKTALALTSANLSGQPSSVCINDFE-SIWPHCAYVYDGGVLPAGRAGSTIIDL
        +LK+           PG+      D +G+R+PD   IR +   S   L  TSAN+SG+ S   +++ +  +     YV D G     +  STII +
Subjt:  VLKRGESSTLEKSLNPGL------DSVGVRVPDYDFIRLISRKSKTALALTSANLSGQPSSVCINDFE-SIWPHCAYVYDGGVLPAGRAGSTIIDL

Q86U90 YrdC domain-containing protein, mitochondrial2.0e-4245.59Show/hide
Query:  SLQAICPASEAFAQ---EAVEALKAGKVIAVPTDTLYGLACDACSLEAVNRIYEIKGRKLTSPLAICVGDVADITRFAVIDHLPPGLLDSLLPGPVTVVL
        ++QA  P    + +    AV  L+AG V+AVPTDTLYGLAC A    A+  +Y +KGR    PLA+C+G VAD+ R+  +  +P GLL  LLPGPVT+V+
Subjt:  SLQAICPASEAFAQ---EAVEALKAGKVIAVPTDTLYGLACDACSLEAVNRIYEIKGRKLTSPLAICVGDVADITRFAVIDHLPPGLLDSLLPGPVTVVL

Query:  KRGESSTLEKSLNPGLDSVGVRVPDYDFIRLISRKSKTALALTSANLSGQPSSVCINDFESIWPHCAYVYDGGVL-----PAGRAGSTIIDLTKKGTFKI
        +R E   L K LNP    VG+R+PD+ F++ +++  +  LALTSANLS Q SS+ + +F+ +WP  + V DGG +     P  R GST++DL+  G F I
Subjt:  KRGESSTLEKSLNPGLDSVGVRVPDYDFIRLISRKSKTALALTSANLSGQPSSVCINDFESIWPHCAYVYDGGVL-----PAGRAGSTIIDLTKKGTFKI

Query:  IRAG
        IR G
Subjt:  IRAG

Arabidopsis top hitse value%identityAlignment
AT3G01920.1 DHBP synthase RibB-like alpha/beta domain1.2e-1027.61Show/hide
Query:  ATFPSSQPGVPNYGLVPFLNQNRGSRVSFS--KMTWSLEKCRTRVDNSLQAICPASEAFAQEAVEALKAGKVIAVPTDTLYGLACDACSLEAVNRIYEIK
        +T PS+    P   +V    +    R+ +S  + T   E     VD      C       Q  ++ LK G V  +PTDT+Y +ACD  +  AV R+  IK
Subjt:  ATFPSSQPGVPNYGLVPFLNQNRGSRVSFS--KMTWSLEKCRTRVDNSLQAICPASEAFAQEAVEALKAGKVIAVPTDTLYGLACDACSLEAVNRIYEIK

Query:  GRKLTSPLAICVGDVADITRFAVIDHLPPG----------LLDSLLPGPVTVVLKR---------GESSTLEKSLNPGLDSVGVRVPDYDFIRLISRKSK
          + + PL+I    + DI  F +    P G           +   LPGP T +L           G  +T  K  +    +VGVR+ D    + I ++  
Subjt:  GRKLTSPLAICVGDVADITRFAVIDHLPPG----------LLDSLLPGPVTVVLKR---------GESSTLEKSLNPGLDSVGVRVPDYDFIRLISRKSK

Query:  TALALTSANLSGQPSSVCINDFESIW-----PHCAYVYDGGVLPAGRAGSTIIDLTKKGTF-KIIRAG
          L  TS  + G   +  + D  +I          +V DGG+  A    STI+D+T  G + K+IR G
Subjt:  TALALTSANLSGQPSSVCINDFESIW-----PHCAYVYDGGVLPAGRAGSTIIDLTKKGTF-KIIRAG

AT5G60590.1 DHBP synthase RibB-like alpha/beta domain7.1e-4364.08Show/hide
Query:  PSSQPGVPNYGLVPFLNQNRGSRVSF-SKMTWSLEKCRTRVDNSLQAICPASEAFAQEAVEALKAGKVIAVPTDTLYGLACDACSLEAVNRIYEIKGRKL
        P  + GV         NQ+R  R     KM WSLE+  T V +    + PA+EA+AQEA+EA+K+ KVIAVPTDTLYG ACDACSLEAV+RIYEIKGRKL
Subjt:  PSSQPGVPNYGLVPFLNQNRGSRVSF-SKMTWSLEKCRTRVDNSLQAICPASEAFAQEAVEALKAGKVIAVPTDTLYGLACDACSLEAVNRIYEIKGRKL

Query:  TSPLAICVGDVADITRFAVIDHLPPGLLDSLLPGPVTVVLKR
        TSPLAICVGDV DI R A   HLP GLLDSLLPGPVT+VL+R
Subjt:  TSPLAICVGDVADITRFAVIDHLPPGLLDSLLPGPVTVVLKR

AT5G60590.2 DHBP synthase RibB-like alpha/beta domain2.1e-8767.36Show/hide
Query:  PSSQPGVPNYGLVPFLNQNRGSRVSF-SKMTWSLEKCRTRVDNSLQAICPASEAFAQEAVEALKAGKVIAVPTDTLYGLACDACSLEAVNRIYEIKGRKL
        P  + GV         NQ+R  R     KM WSLE+  T V +    + PA+EA+AQEA+EA+K+ KVIAVPTDTLYG ACDACSLEAV+RIYEIKGRKL
Subjt:  PSSQPGVPNYGLVPFLNQNRGSRVSF-SKMTWSLEKCRTRVDNSLQAICPASEAFAQEAVEALKAGKVIAVPTDTLYGLACDACSLEAVNRIYEIKGRKL

Query:  TSPLAICVGDVADITRFAVIDHLPPGLLDSLLPGPVTVVLKRGESSTLEKSLNPGLDSVGVRVPDYDFIRLISRKSKTALALTSANLSGQPSSVCINDFE
        TSPLAICVGDV DI R A   HLP GLLDSLLPGPVT+VL+RGESS LEKSLNPG+ ++GVRVPD +FIR +SR S + LALTSANLSG  SSVC+ DFE
Subjt:  TSPLAICVGDVADITRFAVIDHLPPGLLDSLLPGPVTVVLKRGESSTLEKSLNPGLDSVGVRVPDYDFIRLISRKSKTALALTSANLSGQPSSVCINDFE

Query:  SIWPHCAYVYDGGVLPAGRAGSTIIDLTKKGTFKIIRAG
        ++W HCAYVYDGG+LP+GRAGSTI+DLTK G +KIIR G
Subjt:  SIWPHCAYVYDGGVLPAGRAGSTIIDLTKKGTFKIIRAG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGAGTCTTTCTCTCTATTCAGAACCTTTGCAACCTTTCCCTCTTCTCAGCCAGGTGTTCCAAATTATGGGCTTGTTCCATTCTTGAATCAAAATAGAGGATCAAG
GGTGAGTTTTTCTAAAATGACATGGAGTTTGGAAAAATGCAGAACACGTGTGGACAATAGTTTGCAAGCCATTTGCCCTGCCTCTGAAGCTTTTGCTCAAGAGGCTGTTG
AAGCACTTAAAGCTGGAAAGGTGATCGCCGTCCCAACTGATACTCTCTACGGGCTCGCTTGTGATGCTTGTTCTTTGGAGGCAGTCAATAGGATTTATGAGATTAAAGGA
CGTAAACTTACGAGTCCTCTCGCCATTTGTGTTGGTGATGTTGCTGACATAACTCGTTTTGCTGTAATAGACCATTTGCCTCCTGGTTTGCTTGATTCTCTCCTTCCAGG
GCCCGTAACTGTTGTACTAAAAAGAGGCGAGTCGAGTACTCTTGAGAAGTCTTTGAACCCTGGATTGGACAGTGTAGGAGTCCGTGTACCCGACTATGACTTCATTCGGC
TTATTTCTCGTAAATCGAAGACAGCCTTGGCCCTTACAAGTGCTAATTTAAGTGGGCAACCAAGTAGTGTCTGTATAAATGATTTCGAAAGCATATGGCCACACTGTGCT
TATGTATATGATGGTGGCGTTCTTCCTGCTGGGCGAGCAGGTTCTACCATTATCGACCTCACCAAGAAGGGGACATTTAAGATTATCAGAGCTGGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTGAGTCTTTCTCTCTATTCAGAACCTTTGCAACCTTTCCCTCTTCTCAGCCAGGTGTTCCAAATTATGGGCTTGTTCCATTCTTGAATCAAAATAGAGGATCAAG
GGTGAGTTTTTCTAAAATGACATGGAGTTTGGAAAAATGCAGAACACGTGTGGACAATAGTTTGCAAGCCATTTGCCCTGCCTCTGAAGCTTTTGCTCAAGAGGCTGTTG
AAGCACTTAAAGCTGGAAAGGTGATCGCCGTCCCAACTGATACTCTCTACGGGCTCGCTTGTGATGCTTGTTCTTTGGAGGCAGTCAATAGGATTTATGAGATTAAAGGA
CGTAAACTTACGAGTCCTCTCGCCATTTGTGTTGGTGATGTTGCTGACATAACTCGTTTTGCTGTAATAGACCATTTGCCTCCTGGTTTGCTTGATTCTCTCCTTCCAGG
GCCCGTAACTGTTGTACTAAAAAGAGGCGAGTCGAGTACTCTTGAGAAGTCTTTGAACCCTGGATTGGACAGTGTAGGAGTCCGTGTACCCGACTATGACTTCATTCGGC
TTATTTCTCGTAAATCGAAGACAGCCTTGGCCCTTACAAGTGCTAATTTAAGTGGGCAACCAAGTAGTGTCTGTATAAATGATTTCGAAAGCATATGGCCACACTGTGCT
TATGTATATGATGGTGGCGTTCTTCCTGCTGGGCGAGCAGGTTCTACCATTATCGACCTCACCAAGAAGGGGACATTTAAGATTATCAGAGCTGGA
Protein sequenceShow/hide protein sequence
MVESFSLFRTFATFPSSQPGVPNYGLVPFLNQNRGSRVSFSKMTWSLEKCRTRVDNSLQAICPASEAFAQEAVEALKAGKVIAVPTDTLYGLACDACSLEAVNRIYEIKG
RKLTSPLAICVGDVADITRFAVIDHLPPGLLDSLLPGPVTVVLKRGESSTLEKSLNPGLDSVGVRVPDYDFIRLISRKSKTALALTSANLSGQPSSVCINDFESIWPHCA
YVYDGGVLPAGRAGSTIIDLTKKGTFKIIRAG