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MS023769 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS023769
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCACTA en-spm transposon protein
Genome locationscaffold486:201193..202003
RNA-Seq ExpressionMS023769
SyntenyMS023769
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040145.1 transposon protein, putative, CACTA, En/Spm sub-class [Cucumis melo var. makuwa]5.8e-4049.1Show/hide
Query:  KHGRIPIEIIDEFRKPICPFATRFSGAIGTITREKISLRCANWHEVPQEDWDAAKDRLLEHFRVDLSNRIVNKFIERQMQISFKQYRSYLHQYYCEFEDP
        KHG+I IEI +E  KP+  FA + +  IGT  R  I L C NW  VP    +   DRL  HF  D +N +V K++E +MQ  F+++R+ LH+YYC+F+D 
Subjt:  KHGRIPIEIIDEFRKPICPFATRFSGAIGTITREKISLRCANWHEVPQEDWDAAKDRLLEHFRVDLSNRIVNKFIERQMQISFKQYRSYLHQYYCEFEDP

Query:  VEARANPSKRLTSPEDWNHLCDRWETPKWKKIKEGSDIGP---FHESHYNEKDGWVNDNAEDAYVSL
        VEARANP  R+T  EDWN +CDRWET  WK  K+G D+     FHE+H+ EK+GW+ND A+DAY+ +
Subjt:  VEARANPSKRLTSPEDWNHLCDRWETPKWKKIKEGSDIGP---FHESHYNEKDGWVNDNAEDAYVSL

KAA0045598.1 uncharacterized protein E6C27_scaffold243G001040 [Cucumis melo var. makuwa]8.7e-3640.91Show/hide
Query:  KHGRIPIEIIDEFRKPICPFATRFSGAIGTITREKISLRCANWHEVPQEDWDAAKDRLLEHFRVDLSNRIVNKFIERQMQISFKQYRSYLHQYYCEFEDP
        KHG+I IEI +E  KP+  FA + +  IGT  R  I L C NW  VP    +   D L  HF  D +N +V K++E +MQ +F+++R+ LH+YYC+F+D 
Subjt:  KHGRIPIEIIDEFRKPICPFATRFSGAIGTITREKISLRCANWHEVPQEDWDAAKDRLLEHFRVDLSNRIVNKFIERQMQISFKQYRSYLHQYYCEFEDP

Query:  VEARANPSKRLTSPEDWNHLCDRWETPKWKKIKEGS----------------------------------DIGPFHESHYNEKDGWVNDNAEDAYVSL
        VEARANP  R+T  EDWN +CDRWET  WKK +E +                                  +I  FHE+H+ EK+GW ND A+DAY+ +
Subjt:  VEARANPSKRLTSPEDWNHLCDRWETPKWKKIKEGS----------------------------------DIGPFHESHYNEKDGWVNDNAEDAYVSL

KAA0056379.1 hypothetical protein E6C27_scaffold186G001230 [Cucumis melo var. makuwa]1.2e-4047.9Show/hide
Query:  KHGRIPIEIIDEFRKPICPFATRFSGAIGTITREKISLRCANWHEVPQEDWDAAKDRLLEHFRVDLSNRIVNKFIERQMQISFKQYRSYLHQYYCEFEDP
        KHG+I IEI +E  KP+  F  + +  IGT  R  I L C NW  VP    +   D L  HF  D +N +V K++E +MQ +F+++R+ LH+YYC+F+D 
Subjt:  KHGRIPIEIIDEFRKPICPFATRFSGAIGTITREKISLRCANWHEVPQEDWDAAKDRLLEHFRVDLSNRIVNKFIERQMQISFKQYRSYLHQYYCEFEDP

Query:  VEARANPSKRLTSPEDWNHLCDRWETPKWKKIKEGSDIGP---FHESHYNEKDGWVNDNAEDAYVSL
        VEARANP  R+T  EDWN +CDRWET  WKK K+G D+     FHE+H+ +K+GW+ND A+DAY+ +
Subjt:  VEARANPSKRLTSPEDWNHLCDRWETPKWKKIKEGSDIGP---FHESHYNEKDGWVNDNAEDAYVSL

XP_022156286.1 uncharacterized protein LOC111023212 [Momordica charantia]1.6e-4260.9Show/hide
Query:  EVPQEDWDAAKDRLL--EHFRVDLSNRIVNKFIERQMQISFKQYRSYLHQYYCEFEDPVEARANPSKRLTSPEDWNHLCDRWETPKWK------------
        ++P   W A +  ++  EHFRVDLS R+VNKFIE+QMQISFKQYRS LHQYYCEFEDPVEARANP +RLT+PEDWNHLCDRWETP+WK            
Subjt:  EVPQEDWDAAKDRLL--EHFRVDLSNRIVNKFIERQMQISFKQYRSYLHQYYCEFEDPVEARANPSKRLTSPEDWNHLCDRWETPKWK------------

Query:  -------------------KIKEGSDIGP---FHESHYNEKDGWVNDNAEDAYVSL
                           KIKEGSDIGP   F ESHYNEKDG VNDNAEDAY ++
Subjt:  -------------------KIKEGSDIGP---FHESHYNEKDGWVNDNAEDAYVSL

XP_038887409.1 poly [ADP-ribose] polymerase 1-like isoform X2 [Benincasa hispida]1.7e-3944.67Show/hide
Query:  HGRIPIEIIDEFRKPICPFATRFSGAIGTITREKISLRCANWHEVPQEDWDAAKDRLLEHFRVDLSNRIVNKFIERQMQISFKQYRSYLHQYYCEFEDPV
        HGRI IEI +E  KP+C  AT+FS AIGTI R  I LRC +W +V +E  D   D+LL +F  D+  + V K++ +++Q +FK+YRS L+++Y  F+DP 
Subjt:  HGRIPIEIIDEFRKPICPFATRFSGAIGTITREKISLRCANWHEVPQEDWDAAKDRLLEHFRVDLSNRIVNKFIERQMQISFKQYRSYLHQYYCEFEDPV

Query:  EARANPSKRLTSPEDWNHLCDRWETPKWK-------------------------------KIKEGSDIGP---FHESHYNEKDGWVNDNAEDAYVSL
        EARA P KR+T   DWN LC+RWETP+WK                               KIKEG D+     F +SH+ EKDGWVN+NA+DAY+ +
Subjt:  EARANPSKRLTSPEDWNHLCDRWETPKWK-------------------------------KIKEGSDIGP---FHESHYNEKDGWVNDNAEDAYVSL

TrEMBL top hitse value%identityAlignment
A0A5A7SPZ3 Transposase2.6e-3338.97Show/hide
Query:  KHGRIPIEIIDEFRKPICPFATRFSGAIGTITREKISLRCANWHEVPQEDWDAAKDRLLEHFRVDLSNRIVNKFIERQMQISFKQYRSYLHQYYCEFEDP
        KHG++ IEI +E  KP+  FA + +  IGT  R  I L C NW  +P +  +   DR   HF  D +  IV K+++ +MQ  F+++R+ LH+YYC+F+D 
Subjt:  KHGRIPIEIIDEFRKPICPFATRFSGAIGTITREKISLRCANWHEVPQEDWDAAKDRLLEHFRVDLSNRIVNKFIERQMQISFKQYRSYLHQYYCEFEDP

Query:  VEARANPSKRLTSPEDWNHLCDRWETPKWKK-------------------------------IKEGSDIGP---FHESHYNEKDGWVNDNAEDAY
        +EARANP  ++T  EDWN +CDRWET  WKK                                K+G D+     F E+H+ EK+GW+ND A+DAY
Subjt:  VEARANPSKRLTSPEDWNHLCDRWETPKWKK-------------------------------IKEGSDIGP---FHESHYNEKDGWVNDNAEDAY

A0A5A7TFG0 Transposon protein, putative, CACTA, En/Spm sub-class2.8e-4049.1Show/hide
Query:  KHGRIPIEIIDEFRKPICPFATRFSGAIGTITREKISLRCANWHEVPQEDWDAAKDRLLEHFRVDLSNRIVNKFIERQMQISFKQYRSYLHQYYCEFEDP
        KHG+I IEI +E  KP+  FA + +  IGT  R  I L C NW  VP    +   DRL  HF  D +N +V K++E +MQ  F+++R+ LH+YYC+F+D 
Subjt:  KHGRIPIEIIDEFRKPICPFATRFSGAIGTITREKISLRCANWHEVPQEDWDAAKDRLLEHFRVDLSNRIVNKFIERQMQISFKQYRSYLHQYYCEFEDP

Query:  VEARANPSKRLTSPEDWNHLCDRWETPKWKKIKEGSDIGP---FHESHYNEKDGWVNDNAEDAYVSL
        VEARANP  R+T  EDWN +CDRWET  WK  K+G D+     FHE+H+ EK+GW+ND A+DAY+ +
Subjt:  VEARANPSKRLTSPEDWNHLCDRWETPKWKKIKEGSDIGP---FHESHYNEKDGWVNDNAEDAYVSL

A0A5A7TRX4 DUF4216 domain-containing protein4.2e-3640.91Show/hide
Query:  KHGRIPIEIIDEFRKPICPFATRFSGAIGTITREKISLRCANWHEVPQEDWDAAKDRLLEHFRVDLSNRIVNKFIERQMQISFKQYRSYLHQYYCEFEDP
        KHG+I IEI +E  KP+  FA + +  IGT  R  I L C NW  VP    +   D L  HF  D +N +V K++E +MQ +F+++R+ LH+YYC+F+D 
Subjt:  KHGRIPIEIIDEFRKPICPFATRFSGAIGTITREKISLRCANWHEVPQEDWDAAKDRLLEHFRVDLSNRIVNKFIERQMQISFKQYRSYLHQYYCEFEDP

Query:  VEARANPSKRLTSPEDWNHLCDRWETPKWKKIKEGS----------------------------------DIGPFHESHYNEKDGWVNDNAEDAYVSL
        VEARANP  R+T  EDWN +CDRWET  WKK +E +                                  +I  FHE+H+ EK+GW ND A+DAY+ +
Subjt:  VEARANPSKRLTSPEDWNHLCDRWETPKWKKIKEGS----------------------------------DIGPFHESHYNEKDGWVNDNAEDAYVSL

A0A5A7US78 Uncharacterized protein5.7e-4147.9Show/hide
Query:  KHGRIPIEIIDEFRKPICPFATRFSGAIGTITREKISLRCANWHEVPQEDWDAAKDRLLEHFRVDLSNRIVNKFIERQMQISFKQYRSYLHQYYCEFEDP
        KHG+I IEI +E  KP+  F  + +  IGT  R  I L C NW  VP    +   D L  HF  D +N +V K++E +MQ +F+++R+ LH+YYC+F+D 
Subjt:  KHGRIPIEIIDEFRKPICPFATRFSGAIGTITREKISLRCANWHEVPQEDWDAAKDRLLEHFRVDLSNRIVNKFIERQMQISFKQYRSYLHQYYCEFEDP

Query:  VEARANPSKRLTSPEDWNHLCDRWETPKWKKIKEGSDIGP---FHESHYNEKDGWVNDNAEDAYVSL
        VEARANP  R+T  EDWN +CDRWET  WKK K+G D+     FHE+H+ +K+GW+ND A+DAY+ +
Subjt:  VEARANPSKRLTSPEDWNHLCDRWETPKWKKIKEGSDIGP---FHESHYNEKDGWVNDNAEDAYVSL

A0A6J1DUH3 uncharacterized protein LOC1110232128.0e-4360.9Show/hide
Query:  EVPQEDWDAAKDRLL--EHFRVDLSNRIVNKFIERQMQISFKQYRSYLHQYYCEFEDPVEARANPSKRLTSPEDWNHLCDRWETPKWK------------
        ++P   W A +  ++  EHFRVDLS R+VNKFIE+QMQISFKQYRS LHQYYCEFEDPVEARANP +RLT+PEDWNHLCDRWETP+WK            
Subjt:  EVPQEDWDAAKDRLL--EHFRVDLSNRIVNKFIERQMQISFKQYRSYLHQYYCEFEDPVEARANPSKRLTSPEDWNHLCDRWETPKWK------------

Query:  -------------------KIKEGSDIGP---FHESHYNEKDGWVNDNAEDAYVSL
                           KIKEGSDIGP   F ESHYNEKDG VNDNAEDAY ++
Subjt:  -------------------KIKEGSDIGP---FHESHYNEKDGWVNDNAEDAYVSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAGCATGGGAGGATACCTATTGAGATTATTGATGAGTTTAGAAAACCAATATGTCCCTTCGCCACGAGGTTTAGTGGTGCCATTGGTACTATCACACGGGAGAAAATTTC
ATTACGATGCGCGAACTGGCATGAGGTACCACAAGAAGATTGGGATGCAGCTAAGGATCGACTATTGGAGCATTTTCGAGTGGATTTATCGAATAGGATTGTTAATAAAT
TCATAGAGCGACAGATGCAAATATCCTTCAAGCAATATCGATCATATTTGCATCAATACTATTGTGAATTCGAAGATCCCGTAGAAGCCCGTGCAAACCCATCGAAAAGG
CTGACAAGTCCAGAAGATTGGAATCATCTATGTGATAGATGGGAGACCCCTAAGTGGAAGAAAATAAAAGAAGGTTCTGACATTGGTCCGTTCCATGAGAGTCATTACAA
TGAAAAGGATGGATGGGTGAATGATAATGCGGAAGATGCATATGTAAGTTTG
mRNA sequenceShow/hide mRNA sequence
AAGCATGGGAGGATACCTATTGAGATTATTGATGAGTTTAGAAAACCAATATGTCCCTTCGCCACGAGGTTTAGTGGTGCCATTGGTACTATCACACGGGAGAAAATTTC
ATTACGATGCGCGAACTGGCATGAGGTACCACAAGAAGATTGGGATGCAGCTAAGGATCGACTATTGGAGCATTTTCGAGTGGATTTATCGAATAGGATTGTTAATAAAT
TCATAGAGCGACAGATGCAAATATCCTTCAAGCAATATCGATCATATTTGCATCAATACTATTGTGAATTCGAAGATCCCGTAGAAGCCCGTGCAAACCCATCGAAAAGG
CTGACAAGTCCAGAAGATTGGAATCATCTATGTGATAGATGGGAGACCCCTAAGTGGAAGAAAATAAAAGAAGGTTCTGACATTGGTCCGTTCCATGAGAGTCATTACAA
TGAAAAGGATGGATGGGTGAATGATAATGCGGAAGATGCATATGTAAGTTTG
Protein sequenceShow/hide protein sequence
KHGRIPIEIIDEFRKPICPFATRFSGAIGTITREKISLRCANWHEVPQEDWDAAKDRLLEHFRVDLSNRIVNKFIERQMQISFKQYRSYLHQYYCEFEDPVEARANPSKR
LTSPEDWNHLCDRWETPKWKKIKEGSDIGPFHESHYNEKDGWVNDNAEDAYVSL