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MS023785 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS023785
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold207:347038..347375
RNA-Seq ExpressionMS023785
SyntenyMS023785
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BBH05705.1 TatD related DNase [Prunus dulcis]1.2e-1747.87Show/hide
Query:  IYLGMLLGGKPNSIMFWQPIQEKISNKL-AGSRFQLSKGGRLTLCNAVLANIPTHYMFLFQMPSPVCKEFERFLRNFFWKCDSEGKLEHLLRWD
        +YLG+ LGG P ++ FW P+++K+  +L    R  LSKGGRLTL  AVL++IP++YM LF+MP+ V  + E+ + NF W+   EGK  HL+RW+
Subjt:  IYLGMLLGGKPNSIMFWQPIQEKISNKL-AGSRFQLSKGGRLTLCNAVLANIPTHYMFLFQMPSPVCKEFERFLRNFFWKCDSEGKLEHLLRWD

CAB4278922.1 unnamed protein product [Prunus armeniaca]5.6e-1846.81Show/hide
Query:  IYLGMLLGGKPNSIMFWQPIQEKISNKLAG-SRFQLSKGGRLTLCNAVLANIPTHYMFLFQMPSPVCKEFERFLRNFFWKCDSEGKLEHLLRWD
        IYLG+ LGG P S+ FW  + E++  +L G S+  LS+GGRLTL  AVL+++PT+Y+ LF++P+ V K  E+ +RNF W+   EG+ +HL+ W+
Subjt:  IYLGMLLGGKPNSIMFWQPIQEKISNKLAG-SRFQLSKGGRLTLCNAVLANIPTHYMFLFQMPSPVCKEFERFLRNFFWKCDSEGKLEHLLRWD

VVA30963.1 Hypothetical predicted protein, partial [Prunus dulcis]2.8e-1747.87Show/hide
Query:  IYLGMLLGGKPNSIMFWQPIQEKISNKL-AGSRFQLSKGGRLTLCNAVLANIPTHYMFLFQMPSPVCKEFERFLRNFFWKCDSEGKLEHLLRWD
        +YLG+ L G P ++ FW P+++K+  +L    R  LSKGGRLTL  AVL++IP++YM LF+MP+ V  + E+ +RNF W+   EGK  HL+RW+
Subjt:  IYLGMLLGGKPNSIMFWQPIQEKISNKL-AGSRFQLSKGGRLTLCNAVLANIPTHYMFLFQMPSPVCKEFERFLRNFFWKCDSEGKLEHLLRWD

VVA31869.1 Hypothetical predicted protein, partial [Prunus dulcis]3.6e-1749.46Show/hide
Query:  IYLGMLLGGKPNSIMFWQPIQEKISNKL-AGSRFQLSKGGRLTLCNAVLANIPTHYMFLFQMPSPVCKEFERFLRNFFWKCDSEGKLEHLLRW
        +YLG+ LGG P ++ FW P+ +K+  +L    R  LSKGGRLTL  AVL++IP++YM LF+MP  V  + E+ +RNF W+   EGK  HL+RW
Subjt:  IYLGMLLGGKPNSIMFWQPIQEKISNKL-AGSRFQLSKGGRLTLCNAVLANIPTHYMFLFQMPSPVCKEFERFLRNFFWKCDSEGKLEHLLRW

XP_038880332.1 uncharacterized protein LOC120071973 [Benincasa hispida]4.3e-1845.74Show/hide
Query:  IYLGMLLGGKPNSIMFWQPIQEKISNKL-AGSRFQLSKGGRLTLCNAVLANIPTHYMFLFQMPSPVCKEFERFLRNFFWKCDSEGKLEHLLRWD
        +YLG+ LGG P ++ FWQP+ +K+  KL    RF LS+GG+ TLC +V +N+PT+Y+ LF +P  V    ER ++NFFW+    GK+ HL++W+
Subjt:  IYLGMLLGGKPNSIMFWQPIQEKISNKL-AGSRFQLSKGGRLTLCNAVLANIPTHYMFLFQMPSPVCKEFERFLRNFFWKCDSEGKLEHLLRWD

TrEMBL top hitse value%identityAlignment
A0A6J5XET8 Uncharacterized protein2.7e-1846.81Show/hide
Query:  IYLGMLLGGKPNSIMFWQPIQEKISNKLAG-SRFQLSKGGRLTLCNAVLANIPTHYMFLFQMPSPVCKEFERFLRNFFWKCDSEGKLEHLLRWD
        IYLG+ LGG P S+ FW  + E++  +L G S+  LS+GGRLTL  AVL+++PT+Y+ LF++P+ V K  E+ +RNF W+   EG+ +HL+ W+
Subjt:  IYLGMLLGGKPNSIMFWQPIQEKISNKLAG-SRFQLSKGGRLTLCNAVLANIPTHYMFLFQMPSPVCKEFERFLRNFFWKCDSEGKLEHLLRWD

M5WJ76 Reverse transcriptase domain-containing protein (Fragment)2.1e-1850Show/hide
Query:  IYLGMLLGGKPNSIMFWQPIQEKISNKL-AGSRFQLSKGGRLTLCNAVLANIPTHYMFLFQMPSPVCKEFERFLRNFFWKCDSEGKLEHLLRWD
        +YLG+ LGG P ++ FW P+ EK+  +L    R  LSKGGRLTL  AVL++IP++YM LF+MP  V  + E+ +RNF W+   EGK  HL+RW+
Subjt:  IYLGMLLGGKPNSIMFWQPIQEKISNKL-AGSRFQLSKGGRLTLCNAVLANIPTHYMFLFQMPSPVCKEFERFLRNFFWKCDSEGKLEHLLRWD

M5WPQ5 Reverse transcriptase domain-containing protein1.6e-1851.06Show/hide
Query:  IYLGMLLGGKPNSIMFWQPIQEKISNKL-AGSRFQLSKGGRLTLCNAVLANIPTHYMFLFQMPSPVCKEFERFLRNFFWKCDSEGKLEHLLRWD
        IYLG+ LGG P ++ FW P+ EK+  +L    R  LSKGGRLTL  AVL++IP++YM LF+MP  V  + E+ +RNF W+   EGK  HL+RW+
Subjt:  IYLGMLLGGKPNSIMFWQPIQEKISNKL-AGSRFQLSKGGRLTLCNAVLANIPTHYMFLFQMPSPVCKEFERFLRNFFWKCDSEGKLEHLLRWD

M5X4S0 Reverse transcriptase domain-containing protein (Fragment)2.1e-1850Show/hide
Query:  IYLGMLLGGKPNSIMFWQPIQEKISNKL-AGSRFQLSKGGRLTLCNAVLANIPTHYMFLFQMPSPVCKEFERFLRNFFWKCDSEGKLEHLLRWD
        +YLG+ LGG P ++ FW P+ EK+  +L    R  LSKGGRLTL  AVL++IP++YM LF+MP  V  + E+ +RNF W+   EGK  HL+RW+
Subjt:  IYLGMLLGGKPNSIMFWQPIQEKISNKL-AGSRFQLSKGGRLTLCNAVLANIPTHYMFLFQMPSPVCKEFERFLRNFFWKCDSEGKLEHLLRWD

M5XV38 zf-RVT domain-containing protein2.1e-1850Show/hide
Query:  IYLGMLLGGKPNSIMFWQPIQEKISNKL-AGSRFQLSKGGRLTLCNAVLANIPTHYMFLFQMPSPVCKEFERFLRNFFWKCDSEGKLEHLLRWD
        +YLG+ LGG P ++ FW P+ EK+  +L    R  LSKGGRLTL  AVL++IP++YM LF+MP  V  + E+ +RNF W+   EGK  HL+RW+
Subjt:  IYLGMLLGGKPNSIMFWQPIQEKISNKL-AGSRFQLSKGGRLTLCNAVLANIPTHYMFLFQMPSPVCKEFERFLRNFFWKCDSEGKLEHLLRWD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCATTTAAGGATAAGTTAGTTAGCTTCCACTTCCAGATTAAATTGCAAGGCGGAATTTACTTAGGCATGCTTCTTGGGGGGAAACCAAATTCTATCATGTTTTGGCAGCC
CATTCAAGAGAAAATTTCGAATAAGTTGGCTGGTTCTCGTTTTCAGCTTTCAAAAGGCGGTAGATTAACCCTTTGTAATGCAGTTCTTGCTAACATTCCAACGCATTACA
TGTTTTTATTTCAAATGCCCTCACCAGTTTGTAAGGAATTTGAGCGGTTTCTGCGGAATTTTTTCTGGAAATGTGACTCCGAAGGTAAGTTAGAACATCTATTGCGCTGG
GAT
mRNA sequenceShow/hide mRNA sequence
TCATTTAAGGATAAGTTAGTTAGCTTCCACTTCCAGATTAAATTGCAAGGCGGAATTTACTTAGGCATGCTTCTTGGGGGGAAACCAAATTCTATCATGTTTTGGCAGCC
CATTCAAGAGAAAATTTCGAATAAGTTGGCTGGTTCTCGTTTTCAGCTTTCAAAAGGCGGTAGATTAACCCTTTGTAATGCAGTTCTTGCTAACATTCCAACGCATTACA
TGTTTTTATTTCAAATGCCCTCACCAGTTTGTAAGGAATTTGAGCGGTTTCTGCGGAATTTTTTCTGGAAATGTGACTCCGAAGGTAAGTTAGAACATCTATTGCGCTGG
GAT
Protein sequenceShow/hide protein sequence
SFKDKLVSFHFQIKLQGGIYLGMLLGGKPNSIMFWQPIQEKISNKLAGSRFQLSKGGRLTLCNAVLANIPTHYMFLFQMPSPVCKEFERFLRNFFWKCDSEGKLEHLLRW
D