; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS023786 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS023786
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionribosomal RNA small subunit methyltransferase NEP1
Genome locationscaffold207:354522..356350
RNA-Seq ExpressionMS023786
SyntenyMS023786
Gene Ontology termsGO:0070475 - rRNA base methylation (biological process)
GO:0019843 - rRNA binding (molecular function)
GO:0070037 - rRNA (pseudouridine) methyltransferase activity (molecular function)
InterPro domainsIPR005304 - Ribosomal biogenesis, methyltransferase, EMG1/NEP1
IPR029026 - tRNA (guanine-N1-)-methyltransferase, N-terminal
IPR029028 - Alpha/beta knot methyltransferases


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7017643.1 Ribosomal RNA small subunit methyltransferase NEP1, partial [Cucurbita argyrosperma subsp. argyrosperma]6.4e-13086.48Show/hide
Query:  MVRPFAAKGKKRKKTEKYDRSEEDDGESVAAPPKKPMVENEPDEEP----PKEDFHELEGIPVVPKDPRNDNTAGAIFVLERASLEVAKVGKSYQLLNSD
        MVRPFAAKGKKRKKTE+YDR  +DDGE   A  KK MVENEPDE+P     +E+FHELEGIP+VPKDP++D+ AG IFVLERASLEVAKVGK+YQLLNSD
Subjt:  MVRPFAAKGKKRKKTEKYDRSEEDDGESVAAPPKKPMVENEPDEEP----PKEDFHELEGIPVVPKDPRNDNTAGAIFVLERASLEVAKVGKSYQLLNSD

Query:  DHSSFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQY
        DHS+FLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQY
Subjt:  DHSSFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQY

Query:  LPANSRKIGFSHSSDKLVKMRNYLDDVRTDADLVFVLGAMAHGKIEIDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG
        LP+NSRK+GFSHSSDKLVK+R YLD V  D DLVFV+GAMAHGKIE  YTDDLLAISEYPLSASCCIADICKDLA+KWNVG
Subjt:  LPANSRKIGFSHSSDKLVKMRNYLDDVRTDADLVFVLGAMAHGKIEIDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG

XP_004136640.2 ribosomal RNA small subunit methyltransferase nep-1 [Cucumis sativus]9.5e-13488.45Show/hide
Query:  MVRPFAAKGKKRKKTEKYDRSEEDDGESVAAPPKKPMVENEPDEEPPKEDFHELEGIPVVPKDPRNDNTAGAIFVLERASLEVAKVGKSYQLLNSDDHSS
        MVRPFAAKGKKRKK+EKYDR E  D E   +P KK M+ENEPDEEP KEDFHELEGIP+ PKDP+ND+ AG IF+LERASLEVAKVGK+YQLLNSDDHS+
Subjt:  MVRPFAAKGKKRKKTEKYDRSEEDDGESVAAPPKKPMVENEPDEEPPKEDFHELEGIPVVPKDPRNDNTAGAIFVLERASLEVAKVGKSYQLLNSDDHSS

Query:  FLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPAN
        +LRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPAN
Subjt:  FLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPAN

Query:  SRKIGFSHSSDKLVKMRNYLDDVRTDADLVFVLGAMAHGKIEIDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG
         RK+GFSHSSDKLVK+RNYLD V+ D DLVFV+GAMAHGKIE DYTDDLLAISEYPLSASCCIADICKDLAEKWNVG
Subjt:  SRKIGFSHSSDKLVKMRNYLDDVRTDADLVFVLGAMAHGKIEIDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG

XP_008443268.1 PREDICTED: ribosomal RNA small subunit methyltransferase NEP1 [Cucumis melo]1.6e-13690.25Show/hide
Query:  MVRPFAAKGKKRKKTEKYDRSEEDDGESVAAPPKKPMVENEPDEEPPKEDFHELEGIPVVPKDPRNDNTAGAIFVLERASLEVAKVGKSYQLLNSDDHSS
        MVRPFAAKGKKRKK EKYDR E  DGE  ++P KK MVENEPDEEPPKEDFHELEGIP+VPKDP+ DN AG IF+LERASLEVAKVGK+YQLLNSDDHS+
Subjt:  MVRPFAAKGKKRKKTEKYDRSEEDDGESVAAPPKKPMVENEPDEEPPKEDFHELEGIPVVPKDPRNDNTAGAIFVLERASLEVAKVGKSYQLLNSDDHSS

Query:  FLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPAN
        +LRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPAN
Subjt:  FLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPAN

Query:  SRKIGFSHSSDKLVKMRNYLDDVRTDADLVFVLGAMAHGKIEIDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG
         RK+GFSHSSDKLVKMRNYLD V+ D DLVFV+GAMAHGKIE DYTDDLLAISEYPLSASCCIADICKDLAEKWNVG
Subjt:  SRKIGFSHSSDKLVKMRNYLDDVRTDADLVFVLGAMAHGKIEIDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG

XP_022147804.1 ribosomal RNA small subunit methyltransferase nep-1 [Momordica charantia]1.0e-14898.19Show/hide
Query:  MVRPFAAKGKKRKKTEKYDRSEEDDGESVAAPPKKPMVENEPDEEPPKEDFHELEGIPVVPKDPRNDNTAGAIFVLERASLEVAKVGKSYQLLNSDDHSS
        MVRPFAAKGKKRKKTEKYDRSEEDDGESVAAPPKKPMVENEPD EPPKEDFHELEGIPVVPKDPR+DNTAGAIFVLERASLEVAKVGKSYQLLNSDDHS+
Subjt:  MVRPFAAKGKKRKKTEKYDRSEEDDGESVAAPPKKPMVENEPDEEPPKEDFHELEGIPVVPKDPRNDNTAGAIFVLERASLEVAKVGKSYQLLNSDDHSS

Query:  FLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPAN
        FLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPA+
Subjt:  FLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPAN

Query:  SRKIGFSHSSDKLVKMRNYLDDVRTDADLVFVLGAMAHGKIEIDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG
        SRKIGFSHSSDKLVKMRNYLDDVRTDADLVFVLGAMAHGKIE DYTDDLLAISEYPLSASCCIADICKDLAEKWNVG
Subjt:  SRKIGFSHSSDKLVKMRNYLDDVRTDADLVFVLGAMAHGKIEIDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG

XP_038905075.1 ribosomal RNA small subunit methyltransferase nep-1 [Benincasa hispida]1.1e-13489.53Show/hide
Query:  MVRPFAAKGKKRKKTEKYDRSEEDDGESVAAPPKKPMVENEPDEEPPKEDFHELEGIPVVPKDPRNDNTAGAIFVLERASLEVAKVGKSYQLLNSDDHSS
        MVRPFAAKGKKRKK+EKYDR ++DDGES   P KKP  ENEPDEEPPKEDFHELEGIP+VPKDP +D  AG IFVLERASLEVAKVGK+YQLLNSDDHS+
Subjt:  MVRPFAAKGKKRKKTEKYDRSEEDDGESVAAPPKKPMVENEPDEEPPKEDFHELEGIPVVPKDPRNDNTAGAIFVLERASLEVAKVGKSYQLLNSDDHSS

Query:  FLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPAN
        FLR+NNRNPGDYRPDILHQALLAIFDSRIAKAGRLK VYVKTEKGLLIE+KPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPAN
Subjt:  FLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPAN

Query:  SRKIGFSHSSDKLVKMRNYLDDVRTDADLVFVLGAMAHGKIEIDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG
        SRK+GFSHSSDKLVKMRNYLD V  D DLVFV+GAMAHGKIE DYTDDLLAISEYPLSASCCIADICKDLAEKWN+G
Subjt:  SRKIGFSHSSDKLVKMRNYLDDVRTDADLVFVLGAMAHGKIEIDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG

TrEMBL top hitse value%identityAlignment
A0A0A0LFI3 Uncharacterized protein4.9e-13685.71Show/hide
Query:  FSSLLFSRTVKELPGPTMVRPFAAKGKKRKKTEKYDRSEEDDGESVAAPPKKPMVENEPDEEPPKEDFHELEGIPVVPKDPRNDNTAGAIFVLERASLEV
        FS+ L   + K L G TMVRPFAAKGKKRKK+EKYDR E  D E   +P KK M+ENEPDEEP KEDFHELEGIP+ PKDP+ND+ AG IF+LERASLEV
Subjt:  FSSLLFSRTVKELPGPTMVRPFAAKGKKRKKTEKYDRSEEDDGESVAAPPKKPMVENEPDEEPPKEDFHELEGIPVVPKDPRNDNTAGAIFVLERASLEV

Query:  AKVGKSYQLLNSDDHSSFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKRE
        AKVGK+YQLLNSDDHS++LRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKRE
Subjt:  AKVGKSYQLLNSDDHSSFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKRE

Query:  KLFRVIKNPVTQYLPANSRKIGFSHSSDKLVKMRNYLDDVRTDADLVFVLGAMAHGKIEIDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG
        KLFRVIKNPVTQYLPAN RK+GFSHSSDKLVK+RNYLD V+ D DLVFV+GAMAHGKIE DYTDDLLAISEYPLSASCCIADICKDLAEKWNVG
Subjt:  KLFRVIKNPVTQYLPANSRKIGFSHSSDKLVKMRNYLDDVRTDADLVFVLGAMAHGKIEIDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG

A0A1S3B7L0 ribosomal RNA small subunit methyltransferase NEP17.6e-13790.25Show/hide
Query:  MVRPFAAKGKKRKKTEKYDRSEEDDGESVAAPPKKPMVENEPDEEPPKEDFHELEGIPVVPKDPRNDNTAGAIFVLERASLEVAKVGKSYQLLNSDDHSS
        MVRPFAAKGKKRKK EKYDR E  DGE  ++P KK MVENEPDEEPPKEDFHELEGIP+VPKDP+ DN AG IF+LERASLEVAKVGK+YQLLNSDDHS+
Subjt:  MVRPFAAKGKKRKKTEKYDRSEEDDGESVAAPPKKPMVENEPDEEPPKEDFHELEGIPVVPKDPRNDNTAGAIFVLERASLEVAKVGKSYQLLNSDDHSS

Query:  FLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPAN
        +LRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPAN
Subjt:  FLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPAN

Query:  SRKIGFSHSSDKLVKMRNYLDDVRTDADLVFVLGAMAHGKIEIDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG
         RK+GFSHSSDKLVKMRNYLD V+ D DLVFV+GAMAHGKIE DYTDDLLAISEYPLSASCCIADICKDLAEKWNVG
Subjt:  SRKIGFSHSSDKLVKMRNYLDDVRTDADLVFVLGAMAHGKIEIDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG

A0A5D3DPQ6 Ribosomal RNA small subunit methyltransferase NEP17.6e-13790.25Show/hide
Query:  MVRPFAAKGKKRKKTEKYDRSEEDDGESVAAPPKKPMVENEPDEEPPKEDFHELEGIPVVPKDPRNDNTAGAIFVLERASLEVAKVGKSYQLLNSDDHSS
        MVRPFAAKGKKRKK EKYDR E  DGE  ++P KK MVENEPDEEPPKEDFHELEGIP+VPKDP+ DN AG IF+LERASLEVAKVGK+YQLLNSDDHS+
Subjt:  MVRPFAAKGKKRKKTEKYDRSEEDDGESVAAPPKKPMVENEPDEEPPKEDFHELEGIPVVPKDPRNDNTAGAIFVLERASLEVAKVGKSYQLLNSDDHSS

Query:  FLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPAN
        +LRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPAN
Subjt:  FLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPAN

Query:  SRKIGFSHSSDKLVKMRNYLDDVRTDADLVFVLGAMAHGKIEIDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG
         RK+GFSHSSDKLVKMRNYLD V+ D DLVFV+GAMAHGKIE DYTDDLLAISEYPLSASCCIADICKDLAEKWNVG
Subjt:  SRKIGFSHSSDKLVKMRNYLDDVRTDADLVFVLGAMAHGKIEIDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG

A0A6J1D237 ribosomal RNA small subunit methyltransferase nep-15.1e-14998.19Show/hide
Query:  MVRPFAAKGKKRKKTEKYDRSEEDDGESVAAPPKKPMVENEPDEEPPKEDFHELEGIPVVPKDPRNDNTAGAIFVLERASLEVAKVGKSYQLLNSDDHSS
        MVRPFAAKGKKRKKTEKYDRSEEDDGESVAAPPKKPMVENEPD EPPKEDFHELEGIPVVPKDPR+DNTAGAIFVLERASLEVAKVGKSYQLLNSDDHS+
Subjt:  MVRPFAAKGKKRKKTEKYDRSEEDDGESVAAPPKKPMVENEPDEEPPKEDFHELEGIPVVPKDPRNDNTAGAIFVLERASLEVAKVGKSYQLLNSDDHSS

Query:  FLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPAN
        FLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPA+
Subjt:  FLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPAN

Query:  SRKIGFSHSSDKLVKMRNYLDDVRTDADLVFVLGAMAHGKIEIDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG
        SRKIGFSHSSDKLVKMRNYLDDVRTDADLVFVLGAMAHGKIE DYTDDLLAISEYPLSASCCIADICKDLAEKWNVG
Subjt:  SRKIGFSHSSDKLVKMRNYLDDVRTDADLVFVLGAMAHGKIEIDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG

A0A6J1J0G6 ribosomal RNA small subunit methyltransferase nep-14.0e-13086.48Show/hide
Query:  MVRPFAAKGKKRKKTEKYDRSEEDDGESVAAPPKKPMVENEPDEEP----PKEDFHELEGIPVVPKDPRNDNTAGAIFVLERASLEVAKVGKSYQLLNSD
        MVRPFAAKGKKRKKTE+YDR  +DDGE   A  KK MVENEPDE+P     +E+FHELEGIP+VPKDP++D+ AG IFVLERASLEVAKVGK+YQLLNSD
Subjt:  MVRPFAAKGKKRKKTEKYDRSEEDDGESVAAPPKKPMVENEPDEEP----PKEDFHELEGIPVVPKDPRNDNTAGAIFVLERASLEVAKVGKSYQLLNSD

Query:  DHSSFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQY
        DHS+FLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQY
Subjt:  DHSSFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQY

Query:  LPANSRKIGFSHSSDKLVKMRNYLDDVRTDADLVFVLGAMAHGKIEIDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG
        LP+NSRK+GFSHSSDKLVK+R YLD V  D DLVFV+GAMAHGKIE  YTDDLLAISEYPLSASCCIADICKDLA+KWNVG
Subjt:  LPANSRKIGFSHSSDKLVKMRNYLDDVRTDADLVFVLGAMAHGKIEIDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG

SwissProt top hitse value%identityAlignment
O35130 Ribosomal RNA small subunit methyltransferase NEP11.9e-4748.53Show/hide
Query:  IFVLERASLEVAKVGKSYQLLNSDDHSSFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQ
        I VLE ASLE  KVGK+Y+LLN D H S L +N R+PG+ RPDI HQ+LL + DS + +AG L+ VY+ T+K +LIE+ P  R+PRT  RF G+M+QLL 
Subjt:  IFVLERASLEVAKVGKSYQLLNSDDHSSFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQ

Query:  KLSITAAGKREKLFRVIKNPVTQYLPANSRKIGFSHSSDKLVKMRNYLDDVRTDADLVFVLGAMAHGKIEIDYTDDLLAISEYPLSASCCIADICKDLAE
        KLS+ AA   +KL +VIKNPV+ + P    KIG S S + +  +R     V +   +VFV+GA AHGK+ ++YT+ +++IS YPLSA+   A +     E
Subjt:  KLSITAAGKREKLFRVIKNPVTQYLPANSRKIGFSHSSDKLVKMRNYLDDVRTDADLVFVLGAMAHGKIEIDYTDDLLAISEYPLSASCCIADICKDLAE

Query:  KWNV
         W V
Subjt:  KWNV

Q10107 Ribosomal RNA small subunit methyltransferase mra13.6e-4348.1Show/hide
Query:  IPVVPKDPRNDNTAGAIFVLERASLEVAKVGKS----YQLLNSDDHSSFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKP
        IP       +  T   I VL++A LE+ KVGK+    YQLLN DDH   L++ NRN    RPDI HQ LL + DS + KAGRL+ VY+ T K +LIE+ P
Subjt:  IPVVPKDPRNDNTAGAIFVLERASLEVAKVGKS----YQLLNSDDHSSFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKP

Query:  YVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPANSRKIGFSHSSDKLVKMRNYLDDVRTDADLVFVLGAMAHGKIEID--YTDDLL
         VR+PRT KRF G+M+QLL KLSI +    EKL +VIKNPVT YLP N RK   S  +   V  R YL+ ++ +  +   +GAMAHG  +    + D+ +
Subjt:  YVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPANSRKIGFSHSSDKLVKMRNYLDDVRTDADLVFVLGAMAHGKIEID--YTDDLL

Query:  AISEYPLSAS
        +IS+YPLSAS
Subjt:  AISEYPLSAS

Q92979 Ribosomal RNA small subunit methyltransferase NEP11.6e-4644.81Show/hide
Query:  EPDEEPPKEDFHELEGIPVVPKDPR--NDNTAGA---IFVLERASLEVAKVGKSYQLLNSDDHSSFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRL
        +P E    E   + + +P  PK PR    N  G    I VLE ASLE  KVGK+Y+LLN D H S L +N R+PG+ RPDI HQ+LL + DS + +AG L
Subjt:  EPDEEPPKEDFHELEGIPVVPKDPR--NDNTAGA---IFVLERASLEVAKVGKSYQLLNSDDHSSFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRL

Query:  KVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPANSRKIGFSHSSDKLVKMRNYLDDVRTDADLVFVLGA
        + VY+ T+K +LIE+ P  R+PRT  RF G+M+QLL KLS+ AA   +KL +VIKNPV+ + P    K+G S S   +  +R     V +   +VFV+GA
Subjt:  KVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPANSRKIGFSHSSDKLVKMRNYLDDVRTDADLVFVLGA

Query:  MAHGKIEIDYTDDLLAISEYPLSASCCIADICKDLAEKWNV
         AHGK+ ++YT+ +++IS YPLSA+   A +     E W V
Subjt:  MAHGKIEIDYTDDLLAISEYPLSASCCIADICKDLAEKWNV

Q9W4J5 Ribosomal RNA small subunit methyltransferase NEP18.6e-4545.45Show/hide
Query:  IFVLERASLEVAKVGKSYQLLNSDDHSSFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQ
        I VLE A LE  KV  +++LLN DDH+  +R+N R+PG  RPDI HQ LL +FDS + +AG L+ V+V+TE  +LIEI P  R+PRT KRF G+M+QLL 
Subjt:  IFVLERASLEVAKVGKSYQLLNSDDHSSFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQ

Query:  KLSITAAGKREKLFRVIKNPVTQYLPANSRKIGFSHSSDKLVKMRNYL-----DDVRTDADLVFVLGAMAHGKIEIDYTDDLLAISEYPLSASCCIADIC
        K  I A     +L  VIKNP+T ++P   +K   S S   L   R+ +          D  +V V+GA AHG ++ DYT++L +IS YPLSA+   + IC
Subjt:  KLSITAAGKREKLFRVIKNPVTQYLPANSRKIGFSHSSDKLVKMRNYL-----DDVRTDADLVFVLGAMAHGKIEIDYTDDLLAISEYPLSASCCIADIC

Query:  KDLAEKWNV
            E W V
Subjt:  KDLAEKWNV

Q9XX15 Ribosomal RNA small subunit methyltransferase nep-17.8e-4648.02Show/hide
Query:  VLERASLEVAKVGKSYQLLNSDDHSSFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKL
        VLE  SLE AKVG  Y +L+SD H++FLR+  ++P DYRPDILHQ LL + DS + +AG+L+ V+ +T K +L+++ P  R+PRT  RF G+M+QLL KL
Subjt:  VLERASLEVAKVGKSYQLLNSDDHSSFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKL

Query:  SITAAGKREKLFRVIKNPVTQYLPANSRKIGFSHSSDKLVKMRNYLDDVRTDADLVFVLGAMAHGKIEIDYTDDLLAISEYPLSASCCIADICKDLAEKW
        SI AA   +KL  V+KNPV+ +LP  SRK+  S +  +L  M N L    TD  LV ++G +A GKI +DY D    IS YPLSA+   A +   L E W
Subjt:  SITAAGKREKLFRVIKNPVTQYLPANSRKIGFSHSSDKLVKMRNYLDDVRTDADLVFVLGAMAHGKIEIDYTDDLLAISEYPLSASCCIADICKDLAEKW

Query:  NV
         +
Subjt:  NV

Arabidopsis top hitse value%identityAlignment
AT3G57000.1 nucleolar essential protein-related2.5e-7954.33Show/hide
Query:  MVRPFAAKGKKRK-KTEKYDRSEED--------------DGESVAAPPKKPMVENEPDEE-------PPKEDFHELEGIPVVPKDPRNDNTAGAIFVLER
        MVRP+  K  KRK + E+YD+ E++              +    A        E + DEE          ED   + GIP+V   P N   +G +FVLE+
Subjt:  MVRPFAAKGKKRK-KTEKYDRSEED--------------DGESVAAPPKKPMVENEPDEE-------PPKEDFHELEGIPVVPKDPRNDNTAGAIFVLER

Query:  ASLEVAKVGKSYQLLNSDDHSSFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITA
        ASLEVAKVGK+YQLLNSDDH++FL++NNRNP DYRPDI HQALL I DS + KAGRLK VYV+TEKG+L E+KP+VR+PRT KRF G+MLQLLQKLSITA
Subjt:  ASLEVAKVGKSYQLLNSDDHSSFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITA

Query:  AGKREKLFRVIKNPVTQ-YLPANSRKIGFSHSSDKLVKMRNYLDDV-RTDADLVFVLGAMAHGKIEIDYTDDLLAISEYPLSASCCIADICKDLAEKWNV
           REKL R +KNP+ + +LP NS +IGFSHSS+KLV M+ +L  V   D D VFV+GAMAHGKI+ +Y D+ +++SEYPLSA+ CI+ IC+ LA  WN+
Subjt:  AGKREKLFRVIKNPVTQ-YLPANSRKIGFSHSSDKLVKMRNYLDDV-RTDADLVFVLGAMAHGKIEIDYTDDLLAISEYPLSASCCIADICKDLAEKWNV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTCTCTTCTCTTCTCTTCTCGCGTACTGTGAAGGAACTTCCAGGCCCAACCATGGTTCGTCCATTTGCGGCCAAGGGGAAGAAGAGGAAAAAGACGGAGAAATACGACAG
AAGTGAGGAGGACGACGGAGAATCCGTCGCAGCGCCGCCCAAGAAGCCTATGGTGGAGAATGAACCCGATGAAGAACCACCCAAAGAAGATTTCCATGAGCTTGAAGGTA
TTCCAGTCGTTCCAAAAGACCCCAGAAATGACAACACTGCTGGTGCTATCTTCGTCCTCGAGAGAGCTTCTCTGGAGGTCGCCAAAGTTGGGAAGAGTTACCAGCTGTTG
AATTCCGATGACCACTCCAGTTTTTTGCGGAGAAATAACAGAAATCCGGGGGATTACAGACCCGATATCCTGCATCAAGCTCTCTTGGCGATTTTCGATAGCCGCATTGC
AAAGGCTGGGAGGTTGAAAGTTGTTTATGTGAAAACTGAGAAAGGTTTGCTGATTGAAATTAAACCATATGTTCGTCTTCCTAGGACGCAGAAACGGTTCTATGGAGTTA
TGTTGCAATTGCTACAGAAGTTGAGCATCACAGCTGCGGGTAAGCGCGAGAAACTTTTTCGGGTGATAAAGAACCCCGTAACTCAGTATTTACCTGCCAATTCTCGTAAA
ATCGGCTTCTCACATAGTTCAGACAAGTTGGTCAAGATGCGAAATTATCTGGATGATGTCAGAACTGATGCAGACCTTGTTTTTGTGTTGGGTGCAATGGCTCATGGGAA
AATTGAGATAGATTACACGGATGATCTTTTAGCAATTTCTGAATATCCTCTCAGTGCTAGTTGCTGTATTGCGGATATTTGCAAAGATTTGGCAGAGAAATGGAATGTAG
GG
mRNA sequenceShow/hide mRNA sequence
TTCTCTTCTCTTCTCTTCTCGCGTACTGTGAAGGAACTTCCAGGCCCAACCATGGTTCGTCCATTTGCGGCCAAGGGGAAGAAGAGGAAAAAGACGGAGAAATACGACAG
AAGTGAGGAGGACGACGGAGAATCCGTCGCAGCGCCGCCCAAGAAGCCTATGGTGGAGAATGAACCCGATGAAGAACCACCCAAAGAAGATTTCCATGAGCTTGAAGGTA
TTCCAGTCGTTCCAAAAGACCCCAGAAATGACAACACTGCTGGTGCTATCTTCGTCCTCGAGAGAGCTTCTCTGGAGGTCGCCAAAGTTGGGAAGAGTTACCAGCTGTTG
AATTCCGATGACCACTCCAGTTTTTTGCGGAGAAATAACAGAAATCCGGGGGATTACAGACCCGATATCCTGCATCAAGCTCTCTTGGCGATTTTCGATAGCCGCATTGC
AAAGGCTGGGAGGTTGAAAGTTGTTTATGTGAAAACTGAGAAAGGTTTGCTGATTGAAATTAAACCATATGTTCGTCTTCCTAGGACGCAGAAACGGTTCTATGGAGTTA
TGTTGCAATTGCTACAGAAGTTGAGCATCACAGCTGCGGGTAAGCGCGAGAAACTTTTTCGGGTGATAAAGAACCCCGTAACTCAGTATTTACCTGCCAATTCTCGTAAA
ATCGGCTTCTCACATAGTTCAGACAAGTTGGTCAAGATGCGAAATTATCTGGATGATGTCAGAACTGATGCAGACCTTGTTTTTGTGTTGGGTGCAATGGCTCATGGGAA
AATTGAGATAGATTACACGGATGATCTTTTAGCAATTTCTGAATATCCTCTCAGTGCTAGTTGCTGTATTGCGGATATTTGCAAAGATTTGGCAGAGAAATGGAATGTAG
GG
Protein sequenceShow/hide protein sequence
FSSLLFSRTVKELPGPTMVRPFAAKGKKRKKTEKYDRSEEDDGESVAAPPKKPMVENEPDEEPPKEDFHELEGIPVVPKDPRNDNTAGAIFVLERASLEVAKVGKSYQLL
NSDDHSSFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPANSRK
IGFSHSSDKLVKMRNYLDDVRTDADLVFVLGAMAHGKIEIDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG