CuGenDBv2

Gene ID	MS023788
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	DDE Tnp4 domain-containing protein
Genome location	scaffold207:372565..372792
RNA-Seq Expression	MS023788
Synteny	MS023788
Gene Ontology terms	GO:0016020 - membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

BBG92471.1 hypothetical protein Prudu_000221 [Prunus dulcis]

5.7e-14

57.89

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Query:  CINQLRMDRRTFSKLCTLLRIERQLKWLKNITIDEKIAIFLQILANHVKNRVMSFTFKRFVRTISKYFHEYLKAMI
        CI+QLRMDR++F KLC +L  + +L+  +N++ +E +AIFL ILA+H KNRV+ F F R  RT+SKYFHE LKAMI
Subjt:  CINQLRMDRRTFSKLCTLLRIERQLKWLKNITIDEKIAIFLQILANHVKNRVMSFTFKRFVRTISKYFHEYLKAMI

BBH01277.1 hypothetical protein Prudu_011498 [Prunus dulcis]

5.7e-14

57.89

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Query:  CINQLRMDRRTFSKLCTLLRIERQLKWLKNITIDEKIAIFLQILANHVKNRVMSFTFKRFVRTISKYFHEYLKAMI
        CI+QLRMDR++F KLC +L  + +L+  +N++ +E +AIFL ILA+H KNRV+ F F R  RT+SKYFHE LKAMI
Subjt:  CINQLRMDRRTFSKLCTLLRIERQLKWLKNITIDEKIAIFLQILANHVKNRVMSFTFKRFVRTISKYFHEYLKAMI

XP_011464621.1 PREDICTED: uncharacterized protein LOC105351565 [Fragaria vesca subsp. vesca]

1.7e-13

55.26

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Query:  CINQLRMDRRTFSKLCTLLRIERQLKWLKNITIDEKIAIFLQILANHVKNRVMSFTFKRFVRTISKYFHEYLKAMI
        CI++LRMDR +F KLC +L  + QL+  +N++I+E +A+FL  LA+H KNRV+ F F R  RT+SKYFHE LKA+I
Subjt:  CINQLRMDRRTFSKLCTLLRIERQLKWLKNITIDEKIAIFLQILANHVKNRVMSFTFKRFVRTISKYFHEYLKAMI

XP_024156096.1 protein ALP1-like [Rosa chinensis]

3.7e-13

56.58

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Query:  CINQLRMDRRTFSKLCTLLRIERQLKWLKNITIDEKIAIFLQILANHVKNRVMSFTFKRFVRTISKYFHEYLKAMI
        CI+QLRMDR++F KLC +L  + QL+  +N++I+E +A+FL ILA+H KNR ++  F R  RT+SKYFHE LKAMI
Subjt:  CINQLRMDRRTFSKLCTLLRIERQLKWLKNITIDEKIAIFLQILANHVKNRVMSFTFKRFVRTISKYFHEYLKAMI

XP_030479867.1 protein ALP1-like [Cannabis sativa]

2.2e-13

52.63

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Query:  CINQLRMDRRTFSKLCTLLRIERQLKWLKNITIDEKIAIFLQILANHVKNRVMSFTFKRFVRTISKYFHEYLKAMI
        C++QLRM+R TF +LC +L     L+  +N++++E +AIFL ILA+H KNRV+ ++FKR  +T+SKYFHE L AMI
Subjt:  CINQLRMDRRTFSKLCTLLRIERQLKWLKNITIDEKIAIFLQILANHVKNRVMSFTFKRFVRTISKYFHEYLKAMI

TrEMBL top hits

e value

%identity

Alignment

A0A498HXY9 Uncharacterized protein

5.2e-13

53.95

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Query:  CINQLRMDRRTFSKLCTLLRIERQLKWLKNITIDEKIAIFLQILANHVKNRVMSFTFKRFVRTISKYFHEYLKAMI
        CI +LR DRR+F +LC +L    QL+  +N++I+E +A+FL ILA+H+KNR ++  F+R  RTISKYFHE +KAMI
Subjt:  CINQLRMDRRTFSKLCTLLRIERQLKWLKNITIDEKIAIFLQILANHVKNRVMSFTFKRFVRTISKYFHEYLKAMI

A0A4Y1QKY9 Uncharacterized protein

2.8e-14

57.89

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Query:  CINQLRMDRRTFSKLCTLLRIERQLKWLKNITIDEKIAIFLQILANHVKNRVMSFTFKRFVRTISKYFHEYLKAMI
        CI+QLRMDR++F KLC +L  + +L+  +N++ +E +AIFL ILA+H KNRV+ F F R  RT+SKYFHE LKAMI
Subjt:  CINQLRMDRRTFSKLCTLLRIERQLKWLKNITIDEKIAIFLQILANHVKNRVMSFTFKRFVRTISKYFHEYLKAMI

A0A4Y1RBD7 Uncharacterized protein

2.8e-14

57.89

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Query:  CINQLRMDRRTFSKLCTLLRIERQLKWLKNITIDEKIAIFLQILANHVKNRVMSFTFKRFVRTISKYFHEYLKAMI
        CI+QLRMDR++F KLC +L  + +L+  +N++ +E +AIFL ILA+H KNRV+ F F R  RT+SKYFHE LKAMI
Subjt:  CINQLRMDRRTFSKLCTLLRIERQLKWLKNITIDEKIAIFLQILANHVKNRVMSFTFKRFVRTISKYFHEYLKAMI

A0A540L0K6 DDE Tnp4 domain-containing protein

4.0e-13

53.95

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Query:  CINQLRMDRRTFSKLCTLLRIERQLKWLKNITIDEKIAIFLQILANHVKNRVMSFTFKRFVRTISKYFHEYLKAMI
        CI +LRMDRR+F +LC +L    QL+  +N++I+E +A FL I+A+H+KNR ++  F+R  RTISKYFHE +KAMI
Subjt:  CINQLRMDRRTFSKLCTLLRIERQLKWLKNITIDEKIAIFLQILANHVKNRVMSFTFKRFVRTISKYFHEYLKAMI

M5WDE8 Uncharacterized protein

2.8e-14

57.89

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Query:  CINQLRMDRRTFSKLCTLLRIERQLKWLKNITIDEKIAIFLQILANHVKNRVMSFTFKRFVRTISKYFHEYLKAMI
        CI+QLRMDR++F KLC +L  + +L+  +N++ +E +AIFL ILA+H KNRV+ F F R  RT+SKYFHE LKAMI
Subjt:  CINQLRMDRRTFSKLCTLLRIERQLKWLKNITIDEKIAIFLQILANHVKNRVMSFTFKRFVRTISKYFHEYLKAMI

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G43722.1 unknown protein

2.0e-04

33.78

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Query:  CINQLRMDRRTFSKLCTLLRIERQLKWLKNITIDEKIAIFLQILANHVKNRVMSFTFKRFVRTISKYFHEYLKA
        C+  LRM    F+ LC +L+    L+   NI+I+E +A+FL+I  ++   R +   F R   T+ + F E L A
Subjt:  CINQLRMDRRTFSKLCTLLRIERQLKWLKNITIDEKIAIFLQILANHVKNRVMSFTFKRFVRTISKYFHEYLKA

AT5G28730.1 unknown protein

7.9e-06

37.33

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Query:  CINQLRMDRRTFSKLCTLLRIERQLKWLKNITIDEKIAIFLQILANHVKNRVMSFTFKRFVRTISKYFHEYLKAM
        C   +RM    F++LC +L  +  L+   NI++DE +AIFL I A++   R ++  F     TI + FH+ LKAM
Subjt:  CINQLRMDRRTFSKLCTLLRIERQLKWLKNITIDEKIAIFLQILANHVKNRVMSFTFKRFVRTISKYFHEYLKAM

Sequences

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CDS sequence

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TGTATTAATCAACTAAGGATGGATAGACGAACATTTTCTAAGTTATGTACTCTCCTTAGGATTGAAAGACAATTAAAATGGTTAAAGAATATCACTATAGATGAAAAAAT
TGCAATATTTTTACAAATTTTAGCAAACCACGTAAAAAATAGAGTTATGAGTTTTACTTTTAAGAGATTTGTACGAACCATTAGTAAATATTTCCATGAATATCTAAAAG
CTATGATT

mRNA sequence

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Protein sequence

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CINQLRMDRRTFSKLCTLLRIERQLKWLKNITIDEKIAIFLQILANHVKNRVMSFTFKRFVRTISKYFHEYLKAMI

MS023788 (gene) of Bitter gourd (TR) v1 genome