; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS023801 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS023801
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRetrotransposon protein
Genome locationscaffold207:585438..585737
RNA-Seq ExpressionMS023801
SyntenyMS023801
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022158565.1 uncharacterized protein LOC111025018 [Momordica charantia]2.2e-4597Show/hide
Query:  NKRKRSGYTSEMVDVVRTNMRMQTAHLEKMATWPDEKEEKKIARRKIVHDQLKQIPNLEANDYVRLVGILMTDVKKSISFLEVPIEFKKMFCMQLLGKSE
        +KRKRSGYTSEMVDVVRTNMRMQTAHLEKMATWPD+KEEKKIARRKIVHDQLKQIPNLEANDYVRLVGILMT+VKKSISFLEVPIEFKKMFCMQLLGKSE
Subjt:  NKRKRSGYTSEMVDVVRTNMRMQTAHLEKMATWPDEKEEKKIARRKIVHDQLKQIPNLEANDYVRLVGILMTDVKKSISFLEVPIEFKKMFCMQLLGKSE

XP_038877407.1 uncharacterized protein LOC120069696 [Benincasa hispida]8.6e-1034.34Show/hide
Query:  NKRKRSGYTSEMVDVVRTNMRMQTAHLEKMATWPDEKEEKKIARRKIVHDQLKQIPNLEANDYVRLVGILMTDVKKSISFLEVPIEFKKMFCMQLLGKS
        +KRKRS +  EM+D++R+ + M + H+ ++A+W  +K E +  R+K V + +  I  L+ +  V L+ +++TD++K+  FL VP    K +C++LLG++
Subjt:  NKRKRSGYTSEMVDVVRTNMRMQTAHLEKMATWPDEKEEKKIARRKIVHDQLKQIPNLEANDYVRLVGILMTDVKKSISFLEVPIEFKKMFCMQLLGKS

XP_038887234.1 uncharacterized protein LOC120077425 [Benincasa hispida]1.6e-1138.38Show/hide
Query:  NKRKRSGYTSEMVDVVRTNMRMQTAHLEKMATWPDEKEEKKIARRKIVHDQLKQIPNLEANDYVRLVGILMTDVKKSISFLEVPIEFKKMFCMQLLGKS
        +KRKRS +  EM+D+V++ + MQ+ H+ ++A+W +EK E ++   K V + +  I +LE ND V L+ +++TD++K+  FL VP   +K +C++LLG++
Subjt:  NKRKRSGYTSEMVDVVRTNMRMQTAHLEKMATWPDEKEEKKIARRKIVHDQLKQIPNLEANDYVRLVGILMTDVKKSISFLEVPIEFKKMFCMQLLGKS

XP_038895773.1 uncharacterized protein LOC120083935 [Benincasa hispida]3.4e-0636.36Show/hide
Query:  QTAHLEKMATWPDEKEEKKIARRKIVHDQLKQIPNLEANDYVRLVGILMTDVKKSISFLEVPIEFKKMFCMQLLGKS
        ++ H+ ++A+W  EK E +  RRK V + +  I  L+ +D V L+ +L+TD++K+  FL VP   +K +C++LLG++
Subjt:  QTAHLEKMATWPDEKEEKKIARRKIVHDQLKQIPNLEANDYVRLVGILMTDVKKSISFLEVPIEFKKMFCMQLLGKS

XP_038896380.1 uncharacterized protein LOC120084641 [Benincasa hispida]2.7e-1136.36Show/hide
Query:  NKRKRSGYTSEMVDVVRTNMRMQTAHLEKMATWPDEKEEKKIARRKIVHDQLKQIPNLEANDYVRLVGILMTDVKKSISFLEVPIEFKKMFCMQLLGKS
        +KRKR  + +EM+D++R+ + MQ+ H+ ++A+W  EK E +  RRK V + +  I  L+ +D V  + +L+TD++K+  FL VP   +K +C+ LL ++
Subjt:  NKRKRSGYTSEMVDVVRTNMRMQTAHLEKMATWPDEKEEKKIARRKIVHDQLKQIPNLEANDYVRLVGILMTDVKKSISFLEVPIEFKKMFCMQLLGKS

TrEMBL top hitse value%identityAlignment
A0A1S3B4L3 uncharacterized protein LOC1034859531.4e-0535.42Show/hide
Query:  NKRKRSGYTSEMVDVVRTNMRMQTAHLEKMATWPDEKEEKKIARRKIVHDQLKQIPNLEANDYVRLVGILMTDVKKSISFLEVPIEFKKMFCMQLL
        +KRKR     E V+V+R+ M      L+ +A WP EK   ++  R  V  QL+ IP L + D  +L+ IL   ++    FL +P E K  +C  LL
Subjt:  NKRKRSGYTSEMVDVVRTNMRMQTAHLEKMATWPDEKEEKKIARRKIVHDQLKQIPNLEANDYVRLVGILMTDVKKSISFLEVPIEFKKMFCMQLL

A0A5A7TDD6 Retrotransposon protein1.8e-0533Show/hide
Query:  NKRKRSGYTSEMVDVVRTNMRMQTAHLEKMATWPDEKEEKKIARRKIVHDQLKQIPNLEANDYVRLVGILMTDVKKSISFLEVPIEFKKMFCMQLLGKSE
        +KRKR+G++++  D++RT +  +   L  +A WP  + +     R+ V  QL+ IP L   D  RL+ ILM +V    +FL+VP   K  +C  +L +++
Subjt:  NKRKRSGYTSEMVDVVRTNMRMQTAHLEKMATWPDEKEEKKIARRKIVHDQLKQIPNLEANDYVRLVGILMTDVKKSISFLEVPIEFKKMFCMQLLGKSE

A0A5A7TYQ6 Retrotransposon protein1.1e-0536.46Show/hide
Query:  NKRKRSGYTSEMVDVVRTNMRMQTAHLEKMATWPDEKEEKKIARRKIVHDQLKQIPNLEANDYVRLVGILMTDVKKSISFLEVPIEFKKMFCMQLL
        +KRKRSG+ ++  D+VRT M      L ++A WP  + +     R+ +  QL+ IP L   D  RL+ I+M +V    +FLEVP   K  +C  +L
Subjt:  NKRKRSGYTSEMVDVVRTNMRMQTAHLEKMATWPDEKEEKKIARRKIVHDQLKQIPNLEANDYVRLVGILMTDVKKSISFLEVPIEFKKMFCMQLL

A0A5A7U0H7 Retrotransposon protein1.4e-0535.42Show/hide
Query:  NKRKRSGYTSEMVDVVRTNMRMQTAHLEKMATWPDEKEEKKIARRKIVHDQLKQIPNLEANDYVRLVGILMTDVKKSISFLEVPIEFKKMFCMQLL
        +KRKR     E V+V+R+ M      L+ +A WP EK   ++  R  V  QL+ IP L + D  +L+ IL   ++    FL +P E K  +C  LL
Subjt:  NKRKRSGYTSEMVDVVRTNMRMQTAHLEKMATWPDEKEEKKIARRKIVHDQLKQIPNLEANDYVRLVGILMTDVKKSISFLEVPIEFKKMFCMQLL

A0A6J1DW73 uncharacterized protein LOC1110250181.0e-4597Show/hide
Query:  NKRKRSGYTSEMVDVVRTNMRMQTAHLEKMATWPDEKEEKKIARRKIVHDQLKQIPNLEANDYVRLVGILMTDVKKSISFLEVPIEFKKMFCMQLLGKSE
        +KRKRSGYTSEMVDVVRTNMRMQTAHLEKMATWPD+KEEKKIARRKIVHDQLKQIPNLEANDYVRLVGILMT+VKKSISFLEVPIEFKKMFCMQLLGKSE
Subjt:  NKRKRSGYTSEMVDVVRTNMRMQTAHLEKMATWPDEKEEKKIARRKIVHDQLKQIPNLEANDYVRLVGILMTDVKKSISFLEVPIEFKKMFCMQLLGKSE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AACAAGAGGAAACGAAGTGGTTATACATCAGAAATGGTAGATGTGGTACGAACAAATATGAGGATGCAAACAGCCCATTTGGAGAAGATGGCAACGTGGCCGGATGAAAA
GGAAGAAAAAAAGATCGCACGACGCAAGATAGTACATGACCAGCTGAAACAAATACCAAACTTGGAGGCCAACGATTATGTCCGACTTGTCGGTATTTTGATGACTGATG
TCAAGAAGTCCATCAGTTTCCTTGAGGTCCCAATAGAATTTAAGAAAATGTTTTGCATGCAATTGCTGGGAAAGAGCGAA
mRNA sequenceShow/hide mRNA sequence
AACAAGAGGAAACGAAGTGGTTATACATCAGAAATGGTAGATGTGGTACGAACAAATATGAGGATGCAAACAGCCCATTTGGAGAAGATGGCAACGTGGCCGGATGAAAA
GGAAGAAAAAAAGATCGCACGACGCAAGATAGTACATGACCAGCTGAAACAAATACCAAACTTGGAGGCCAACGATTATGTCCGACTTGTCGGTATTTTGATGACTGATG
TCAAGAAGTCCATCAGTTTCCTTGAGGTCCCAATAGAATTTAAGAAAATGTTTTGCATGCAATTGCTGGGAAAGAGCGAA
Protein sequenceShow/hide protein sequence
NKRKRSGYTSEMVDVVRTNMRMQTAHLEKMATWPDEKEEKKIARRKIVHDQLKQIPNLEANDYVRLVGILMTDVKKSISFLEVPIEFKKMFCMQLLGKSE