; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS023815 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS023815
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionzf-RVT domain-containing protein
Genome locationscaffold207:888862..889060
RNA-Seq ExpressionMS023815
SyntenyMS023815
Gene Ontology termsGO:0043412 - macromolecule modification (biological process)
GO:0044255 - cellular lipid metabolic process (biological process)
GO:0044260 - cellular macromolecule metabolic process (biological process)
GO:0044271 - cellular nitrogen compound biosynthetic process (biological process)
GO:0090304 - nucleic acid metabolic process (biological process)
GO:1901564 - organonitrogen compound metabolic process (biological process)
GO:1901576 - organic substance biosynthetic process (biological process)
GO:0043231 - intracellular membrane-bounded organelle (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0016772 - transferase activity, transferring phosphorus-containing groups (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG4946816.1 hypothetical protein JHK87_042823 [Glycine soja]3.3e-1052.24Show/hide
Query:  KCAFWELIVEKMERKLARWKS--FISRGRVTLINSVLTSIPLHFFSIFKCPKQIITRMENLIRNFFW
        +C  WE ++ K ERKLA WK       GRV LINSVLTSIP++F S F+ P+Q+I+++  L RNF W
Subjt:  KCAFWELIVEKMERKLARWKS--FISRGRVTLINSVLTSIPLHFFSIFKCPKQIITRMENLIRNFFW

KHN27546.1 LINE-1 reverse transcriptase like, partial [Glycine soja]5.6e-1054.69Show/hide
Query:  FWELIVEKMERKLARWK-SFIS-RGRVTLINSVLTSIPLHFFSIFKCPKQIITRMENLIRNFFW
        FW+ I+ K ER+LA WK   +S RGRVTLIN+VLTSIP++FFS F+ P +II +++++ R F W
Subjt:  FWELIVEKMERKLARWK-SFIS-RGRVTLINSVLTSIPLHFFSIFKCPKQIITRMENLIRNFFW

PNX91659.1 ribonuclease H, partial [Trifolium pratense]2.1e-0953.97Show/hide
Query:  WELIVEKMERKLARWK--SFISRGRVTLINSVLTSIPLHFFSIFKCPKQIITRMENLIRNFFW
        W+ IVE M ++L+ W   +    GRVTLINSVL+S+PL+FFS FK P+ IIT++E + RNF W
Subjt:  WELIVEKMERKLARWK--SFISRGRVTLINSVLTSIPLHFFSIFKCPKQIITRMENLIRNFFW

RZB61060.1 Transposon TX1 149 kDa protein [Glycine soja]9.6e-1057.14Show/hide
Query:  WELIVEKMERKLARWKS-FIS-RGRVTLINSVLTSIPLHFFSIFKCPKQIITRMENLIRNFFW
        W+ I++K ER+LARWK  FIS  GRV LI SVLTSIP+++FS F+ PK +I R+  L R+F W
Subjt:  WELIVEKMERKLARWKS-FIS-RGRVTLINSVLTSIPLHFFSIFKCPKQIITRMENLIRNFFW

XP_028246783.1 uncharacterized protein LOC114424118 [Glycine soja]9.6e-1051.52Show/hide
Query:  CAFWELIVEKMERKLARWKS--FISRGRVTLINSVLTSIPLHFFSIFKCPKQIITRMENLIRNFFW
        C  W+ I+ K ERKLA+WK    +  GRVTLI SVLTSIP++FFS FK PK++  ++  + R F W
Subjt:  CAFWELIVEKMERKLARWKS--FISRGRVTLINSVLTSIPLHFFSIFKCPKQIITRMENLIRNFFW

TrEMBL top hitse value%identityAlignment
A0A2K3MLS5 Ribonuclease H (Fragment)1.0e-0953.97Show/hide
Query:  WELIVEKMERKLARWK--SFISRGRVTLINSVLTSIPLHFFSIFKCPKQIITRMENLIRNFFW
        W+ IVE M ++L+ W   +    GRVTLINSVL+S+PL+FFS FK P+ IIT++E + RNF W
Subjt:  WELIVEKMERKLARWK--SFISRGRVTLINSVLTSIPLHFFSIFKCPKQIITRMENLIRNFFW

A0A445GIM7 Transposon TX1 149 kDa protein4.7e-1057.14Show/hide
Query:  WELIVEKMERKLARWKS-FIS-RGRVTLINSVLTSIPLHFFSIFKCPKQIITRMENLIRNFFW
        W+ I++K ER+LARWK  FIS  GRV LI SVLTSIP+++FS F+ PK +I R+  L R+F W
Subjt:  WELIVEKMERKLARWKS-FIS-RGRVTLINSVLTSIPLHFFSIFKCPKQIITRMENLIRNFFW

A0A803PSR8 Uncharacterized protein1.0e-0947.06Show/hide
Query:  KCAFWELIVEKMERKLARWK-SFIS-RGRVTLINSVLTSIPLHFFSIFKCPKQIITRMENLIRNFFWK
        K  FWE +++K  ++L  WK SF+S RGR+TLI SVL+S+P+++ S+FK PK ++  +E ++R+FFW+
Subjt:  KCAFWELIVEKMERKLARWK-SFIS-RGRVTLINSVLTSIPLHFFSIFKCPKQIITRMENLIRNFFWK

A0A803PW65 Uncharacterized protein1.0e-0947.06Show/hide
Query:  KCAFWELIVEKMERKLARWK-SFISR-GRVTLINSVLTSIPLHFFSIFKCPKQIITRMENLIRNFFWK
        K  FWE +++K  ++L  WK SF+SR GR+TLI SVL+S+P+++ S+FK PK ++  +E ++R+FFW+
Subjt:  KCAFWELIVEKMERKLARWK-SFISR-GRVTLINSVLTSIPLHFFSIFKCPKQIITRMENLIRNFFWK

A0A803QQM3 Uncharacterized protein1.0e-0947.06Show/hide
Query:  KCAFWELIVEKMERKLARWK-SFISR-GRVTLINSVLTSIPLHFFSIFKCPKQIITRMENLIRNFFWK
        K +FWE +++K   ++  WK SF+SR GR+TLI SVL+S+P++F S+FK PK ++  +E ++R+FFW+
Subjt:  KCAFWELIVEKMERKLARWK-SFISR-GRVTLINSVLTSIPLHFFSIFKCPKQIITRMENLIRNFFWK

SwissProt top hitse value%identityAlignment
P0C2F6 Putative ribonuclease H protein At1g657509.7e-0535Show/hide
Query:  IVEKMERKLARW--KSFISRGRVTLINSVLTSIPLHFFSIFKCPKQIITRMENLIRNFFW
        I+E++  +++ W  K+    GR+TL  +VL+S+P+H  S    P+ I+ R++ L R F W
Subjt:  IVEKMERKLARW--KSFISRGRVTLINSVLTSIPLHFFSIFKCPKQIITRMENLIRNFFW

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAATGTGCCTTCTGGGAGCTAATAGTGGAGAAAATGGAGAGGAAGCTAGCTAGATGGAAATCCTTTATCTCGAGAGGTAGAGTAACTTTGATTAACTCAGTGCTGACAAG
TATTCCCCTGCACTTCTTCTCTATTTTTAAATGCCCAAAACAAATCATTACAAGGATGGAGAATTTAATCAGAAATTTCTTTTGGAAA
mRNA sequenceShow/hide mRNA sequence
AAATGTGCCTTCTGGGAGCTAATAGTGGAGAAAATGGAGAGGAAGCTAGCTAGATGGAAATCCTTTATCTCGAGAGGTAGAGTAACTTTGATTAACTCAGTGCTGACAAG
TATTCCCCTGCACTTCTTCTCTATTTTTAAATGCCCAAAACAAATCATTACAAGGATGGAGAATTTAATCAGAAATTTCTTTTGGAAA
Protein sequenceShow/hide protein sequence
KCAFWELIVEKMERKLARWKSFISRGRVTLINSVLTSIPLHFFSIFKCPKQIITRMENLIRNFFWK