; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS023823 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS023823
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationscaffold207:986719..986850
RNA-Seq ExpressionMS023823
SyntenyMS023823
Gene Ontology termsGO:0044237 - cellular metabolic process (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0016772 - transferase activity, transferring phosphorus-containing groups (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035247.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]4.6e-0861.36Show/hide
Query:  VCSDHFPIILESPNHKWGPCPFRLENQWLHDKKFQQFIQSYWSS
        + SDHFPIILESP  KWGPCPFRL N  L DK+FQ+    +W++
Subjt:  VCSDHFPIILESPNHKWGPCPFRLENQWLHDKKFQQFIQSYWSS
KAA0056838.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]2.3e-0761.9Show/hide
Query:  SDHFPIILESPNHKWGPCPFRLENQWLHDKKFQQFIQSYWSS
        SDHFPI+LESP  KWGPCPFRL N  L DK FQ+   ++W++
Subjt:  SDHFPIILESPNHKWGPCPFRLENQWLHDKKFQQFIQSYWSS
KAA0057507.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]6.0e-0864.29Show/hide
Query:  SDHFPIILESPNHKWGPCPFRLENQWLHDKKFQQFIQSYWSS
        SDHFPI+LESP  KWGPCPFRL N  L DK+FQ+   ++W+S
Subjt:  SDHFPIILESPNHKWGPCPFRLENQWLHDKKFQQFIQSYWSS
TYK08190.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]6.0e-0864.29Show/hide
Query:  SDHFPIILESPNHKWGPCPFRLENQWLHDKKFQQFIQSYWSS
        SDHFPI+LESP  KWGPCPFRL N  L DK+FQ+   ++W+S
Subjt:  SDHFPIILESPNHKWGPCPFRLENQWLHDKKFQQFIQSYWSS
XP_022145142.1 uncharacterized protein LOC111014657 [Momordica charantia]4.4e-1169.77Show/hide
Query:  CSDHFPIILESPNHKWGPCPFRLENQWLHDKKFQQFIQSYWSS
        CSDH+PI+LE PN +WG CPFRLEN WL DK FQQ I++ WSS
Subjt:  CSDHFPIILESPNHKWGPCPFRLENQWLHDKKFQQFIQSYWSS
TrEMBL top hitse value%identityAlignment
A0A5A7US62 LINE-1 retrotransposable element ORF2 protein2.9e-0864.29Show/hide
Query:  SDHFPIILESPNHKWGPCPFRLENQWLHDKKFQQFIQSYWSS
        SDHFPI+LESP  KWGPCPFRL N  L DK+FQ+   ++W+S
Subjt:  SDHFPIILESPNHKWGPCPFRLENQWLHDKKFQQFIQSYWSS
A0A5D3BKT8 LINE-1 retrotransposable element ORF2 protein1.1e-0761.9Show/hide
Query:  SDHFPIILESPNHKWGPCPFRLENQWLHDKKFQQFIQSYWSS
        SDHFPI+LESP  KWGPCPFRL N  L DK FQ+   ++W++
Subjt:  SDHFPIILESPNHKWGPCPFRLENQWLHDKKFQQFIQSYWSS
A0A5D3CA17 LINE-1 retrotransposable element ORF2 protein2.9e-0864.29Show/hide
Query:  SDHFPIILESPNHKWGPCPFRLENQWLHDKKFQQFIQSYWSS
        SDHFPI+LESP  KWGPCPFRL N  L DK+FQ+   ++W+S
Subjt:  SDHFPIILESPNHKWGPCPFRLENQWLHDKKFQQFIQSYWSS
A0A5D3DFM9 LINE-1 retrotransposable element ORF2 protein2.2e-0861.36Show/hide
Query:  VCSDHFPIILESPNHKWGPCPFRLENQWLHDKKFQQFIQSYWSS
        + SDHFPIILESP  KWGPCPFRL N  L DK+FQ+    +W++
Subjt:  VCSDHFPIILESPNHKWGPCPFRLENQWLHDKKFQQFIQSYWSS
A0A6J1CVN2 uncharacterized protein LOC1110146572.2e-1169.77Show/hide
Query:  CSDHFPIILESPNHKWGPCPFRLENQWLHDKKFQQFIQSYWSS
        CSDH+PI+LE PN +WG CPFRLEN WL DK FQQ I++ WSS
Subjt:  CSDHFPIILESPNHKWGPCPFRLENQWLHDKKFQQFIQSYWSS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTATGTTCGGATCACTTCCCTATCATTCTTGAATCTCCAAATCATAAATGGGGCCCATGTCCTTTTCGTCTAGAGAATCAATGGCTACACGACAAGAAATTCCAACAATT
TATTCAATCTTATTGGTCTTCT
mRNA sequenceShow/hide mRNA sequence
GTATGTTCGGATCACTTCCCTATCATTCTTGAATCTCCAAATCATAAATGGGGCCCATGTCCTTTTCGTCTAGAGAATCAATGGCTACACGACAAGAAATTCCAACAATT
TATTCAATCTTATTGGTCTTCT
Protein sequenceShow/hide protein sequence
VCSDHFPIILESPNHKWGPCPFRLENQWLHDKKFQQFIQSYWSS