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MS023825 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS023825
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionprotein SRC1
Genome locationscaffold207:1026942..1027244
RNA-Seq ExpressionMS023825
SyntenyMS023825
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR039285 - Dehydrin HIRD11-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008443295.1 PREDICTED: protein SRC1 [Cucumis melo]4.3e-1765.38Show/hide
Query:  MSGFIEKIEEKLHIGGGHKGDEH--HKSGDHHKGDDHHKSGEHGAKAGEHHKEGIVDKIKDKIH-GDGHDHDHKGEEKKKKKEKKKKEGEHNHGGHSSSD
        MSGFIEKI EKLHIGG HKG+ H  HK G+HH  D+H K  +     GE HKEGI++KIKDKIH GDGH HD KGE+KKK+K+KK + G  +HGG SSSD
Subjt:  MSGFIEKIEEKLHIGGGHKGDEH--HKSGDHHKGDDHHKSGEHGAKAGEHHKEGIVDKIKDKIH-GDGHDHDHKGEEKKKKKEKKKKEGEHNHGGHSSSD

Query:  SDSD
        SDSD
Subjt:  SDSD
XP_022158601.1 protein SRC1 [Momordica charantia]1.6e-4398.02Show/hide
Query:  MSGFIEKIEEKLHIGGGHKGDEHHKSGDHHKGDDHHKSGEHGAKAGEHHKEGIVDKIKDKIHGDGHDHDHKGEEKKKKKEKKKKEGEHNHGGHSSSDSDS
        MSGFIEKIEEKLHIGGGHKGDEHHKSGDHHKGDDHHKSGEHGAKAGEHHKEGIVDKIKDKIHGDGHDHDHKG EKKKKKEKKKKEGEH+HGGHSSSDSDS
Subjt:  MSGFIEKIEEKLHIGGGHKGDEHHKSGDHHKGDDHHKSGEHGAKAGEHHKEGIVDKIKDKIHGDGHDHDHKGEEKKKKKEKKKKEGEHNHGGHSSSDSDS

Query:  D
        D
Subjt:  D
XP_022973362.1 protein SRC1-like [Cucurbita maxima]6.0e-1967.62Show/hide
Query:  MSGFIEKIEEKLHIGGGHKGDEHHKSGDHHKGDDHHKSGEHGAKA---GEHHKEGIVDKIKDKIHGDGHDHDHKGEEKKKKKEKKKKEGEHNHGGH-SSS
        MSG +EKI EKLHIGG HKG+  HK GDHH+ D H    +HG K+   GE HKEG+++KIKDKIHG G  HD KGE+KKKKKEKKKK GEH  GGH SSS
Subjt:  MSGFIEKIEEKLHIGGGHKGDEHHKSGDHHKGDDHHKSGEHGAKA---GEHHKEGIVDKIKDKIHGDGHDHDHKGEEKKKKKEKKKKEGEHNHGGH-SSS

Query:  DSDSD
        DSDSD
Subjt:  DSDSD
XP_022974702.1 protein SRC1-like [Cucurbita maxima]1.7e-1866.67Show/hide
Query:  MSGFIEKIEEKLHIGGGHKGDEHHKSGDHHKGDDHHKSGEHGAKA---GEHHKEGIVDKIKDKIHGDGHDHDHKGEEKKKKKEKKKKEGEHNHGGH-SSS
        MSG +EKI EKLHIGG HKG+  HK G+HH+ D H    +HG K+   GE HKEG+++KIKDKIHG G  HD KGE+KKKKKEKKKK GEH  GGH SSS
Subjt:  MSGFIEKIEEKLHIGGGHKGDEHHKSGDHHKGDDHHKSGEHGAKA---GEHHKEGIVDKIKDKIHGDGHDHDHKGEEKKKKKEKKKKEGEHNHGGH-SSS

Query:  DSDSD
        DSDSD
Subjt:  DSDSD
XP_038903205.1 protein SRC1 [Benincasa hispida]7.8e-1964.76Show/hide
Query:  MSGFIEKIEEKLHIGGGHKGDEHH--KSGDHHKGDDHHKSGEHGAKAGEHHKEGIVDKIKDKIHGDGHDHDHKGEEKKKKKEKKKKEGEHNH--GGHSSS
        MSGFIEKI EKLHIGG H   EHH    G+HH  D+H K G+     GE HKEG+++KIKDKIHG   DHD KGE+KKK+K++KKK+GEH+H  GGHSSS
Subjt:  MSGFIEKIEEKLHIGGGHKGDEHH--KSGDHHKGDDHHKSGEHGAKAGEHHKEGIVDKIKDKIHGDGHDHDHKGEEKKKKKEKKKKEGEHNH--GGHSSS

Query:  DSDSD
        DSDSD
Subjt:  DSDSD
TrEMBL top hitse value%identityAlignment
A0A1S3B8E4 protein SRC12.1e-1765.38Show/hide
Query:  MSGFIEKIEEKLHIGGGHKGDEH--HKSGDHHKGDDHHKSGEHGAKAGEHHKEGIVDKIKDKIH-GDGHDHDHKGEEKKKKKEKKKKEGEHNHGGHSSSD
        MSGFIEKI EKLHIGG HKG+ H  HK G+HH  D+H K  +     GE HKEGI++KIKDKIH GDGH HD KGE+KKK+K+KK + G  +HGG SSSD
Subjt:  MSGFIEKIEEKLHIGGGHKGDEH--HKSGDHHKGDDHHKSGEHGAKAGEHHKEGIVDKIKDKIH-GDGHDHDHKGEEKKKKKEKKKKEGEHNHGGHSSSD

Query:  SDSD
        SDSD
Subjt:  SDSD
A0A5A7UF86 Zinc transporter ZIP62.1e-1765.38Show/hide
Query:  MSGFIEKIEEKLHIGGGHKGDEH--HKSGDHHKGDDHHKSGEHGAKAGEHHKEGIVDKIKDKIH-GDGHDHDHKGEEKKKKKEKKKKEGEHNHGGHSSSD
        MSGFIEKI EKLHIGG HKG+ H  HK G+HH  D+H K  +     GE HKEGI++KIKDKIH GDGH HD KGE+KKK+K+KK + G  +HGG SSSD
Subjt:  MSGFIEKIEEKLHIGGGHKGDEH--HKSGDHHKGDDHHKSGEHGAKAGEHHKEGIVDKIKDKIH-GDGHDHDHKGEEKKKKKEKKKKEGEHNHGGHSSSD

Query:  SDSD
        SDSD
Subjt:  SDSD
A0A6J1E1E0 protein SRC17.6e-4498.02Show/hide
Query:  MSGFIEKIEEKLHIGGGHKGDEHHKSGDHHKGDDHHKSGEHGAKAGEHHKEGIVDKIKDKIHGDGHDHDHKGEEKKKKKEKKKKEGEHNHGGHSSSDSDS
        MSGFIEKIEEKLHIGGGHKGDEHHKSGDHHKGDDHHKSGEHGAKAGEHHKEGIVDKIKDKIHGDGHDHDHKG EKKKKKEKKKKEGEH+HGGHSSSDSDS
Subjt:  MSGFIEKIEEKLHIGGGHKGDEHHKSGDHHKGDDHHKSGEHGAKAGEHHKEGIVDKIKDKIHGDGHDHDHKGEEKKKKKEKKKKEGEHNHGGHSSSDSDS

Query:  D
        D
Subjt:  D
A0A6J1I7B7 protein SRC1-like2.9e-1967.62Show/hide
Query:  MSGFIEKIEEKLHIGGGHKGDEHHKSGDHHKGDDHHKSGEHGAKA---GEHHKEGIVDKIKDKIHGDGHDHDHKGEEKKKKKEKKKKEGEHNHGGH-SSS
        MSG +EKI EKLHIGG HKG+  HK GDHH+ D H    +HG K+   GE HKEG+++KIKDKIHG G  HD KGE+KKKKKEKKKK GEH  GGH SSS
Subjt:  MSGFIEKIEEKLHIGGGHKGDEHHKSGDHHKGDDHHKSGEHGAKA---GEHHKEGIVDKIKDKIHGDGHDHDHKGEEKKKKKEKKKKEGEHNHGGH-SSS

Query:  DSDSD
        DSDSD
Subjt:  DSDSD
A0A6J1IAZ2 protein SRC1-like8.4e-1966.67Show/hide
Query:  MSGFIEKIEEKLHIGGGHKGDEHHKSGDHHKGDDHHKSGEHGAKA---GEHHKEGIVDKIKDKIHGDGHDHDHKGEEKKKKKEKKKKEGEHNHGGH-SSS
        MSG +EKI EKLHIGG HKG+  HK G+HH+ D H    +HG K+   GE HKEG+++KIKDKIHG G  HD KGE+KKKKKEKKKK GEH  GGH SSS
Subjt:  MSGFIEKIEEKLHIGGGHKGDEHHKSGDHHKGDDHHKSGEHGAKA---GEHHKEGIVDKIKDKIHGDGHDHDHKGEEKKKKKEKKKKEGEHNHGGH-SSS

Query:  DSDSD
        DSDSD
Subjt:  DSDSD
SwissProt top hitse value%identityAlignment
O04132 Protein SRC12.0e-1762.5Show/hide
Query:  MSGFIEKIEEKLHIGGGHKGDEHHKSGDH---HKGDDHHKSGEHGAKAGEH--------HKEGIVDKIKDKIHGDGHDHDHKGEEKKKKKEKKKKEGEHN
        MSG I KIEE LH+ GGHK +EH   G+H   HKG+  HK   HG   GEH        HKEG+VDKIKDKIHGDGHD   KG EKKKKK+KKKKE  H+
Subjt:  MSGFIEKIEEKLHIGGGHKGDEHHKSGDH---HKGDDHHKSGEHGAKAGEH--------HKEGIVDKIKDKIHGDGHDHDHKGEEKKKKKEKKKKEGEHN

Query:  HGGHSSSDSDSD
        H GHSSS SDSD
Subjt:  HGGHSSSDSDSD
Q9SLJ2 Dehydrin HIRD116.0e-1454.81Show/hide
Query:  MSGFIEKIEEKLHIGGGHKGDEHHKSGDHHKGDDHHKSGEHGAKAGEHHKEGIVDKIKDKIH---GDGHDHDHKGEEKKKKKEKKKKEGEHNHGGHSSSD
        M+G I KI + LHIGGG+K  EH K  +H K  D HKSGE        HKEGIVDKIKDKIH   G  HD + K  + +KKK+K KKE +H+  GH SS 
Subjt:  MSGFIEKIEEKLHIGGGHKGDEHHKSGDHHKGDDHHKSGEHGAKAGEHHKEGIVDKIKDKIH---GDGHDHDHKGEEKKKKKEKKKKEGEHNHGGHSSSD

Query:  SDSD
        SDSD
Subjt:  SDSD
Arabidopsis top hitse value%identityAlignment
AT1G54410.1 dehydrin family protein4.3e-1554.81Show/hide
Query:  MSGFIEKIEEKLHIGGGHKGDEHHKSGDHHKGDDHHKSGEHGAKAGEHHKEGIVDKIKDKIH---GDGHDHDHKGEEKKKKKEKKKKEGEHNHGGHSSSD
        M+G I KI + LHIGGG+K  EH K  +H K  D HKSGE        HKEGIVDKIKDKIH   G  HD + K  + +KKK+K KKE +H+  GH SS 
Subjt:  MSGFIEKIEEKLHIGGGHKGDEHHKSGDHHKGDDHHKSGEHGAKAGEHHKEGIVDKIKDKIH---GDGHDHDHKGEEKKKKKEKKKKEGEHNHGGHSSSD

Query:  SDSD
        SDSD
Subjt:  SDSD

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAGGATTCATCGAGAAAATTGAAGAGAAGCTCCACATCGGAGGGGGCCATAAGGGCGACGAGCACCACAAGAGCGGCGATCACCACAAGGGCGACGATCACCACAA
GAGCGGCGAGCACGGCGCCAAGGCGGGGGAGCACCACAAGGAGGGGATTGTGGATAAGATCAAGGACAAGATCCACGGCGACGGACACGACCACGACCACAAAGGCGAGG
AGAAGAAGAAGAAGAAGGAGAAGAAGAAGAAGGAGGGCGAGCACAACCACGGCGGCCACAGCAGCAGCGACAGCGATAGCGAC
mRNA sequenceShow/hide mRNA sequence
ATGTCAGGATTCATCGAGAAAATTGAAGAGAAGCTCCACATCGGAGGGGGCCATAAGGGCGACGAGCACCACAAGAGCGGCGATCACCACAAGGGCGACGATCACCACAA
GAGCGGCGAGCACGGCGCCAAGGCGGGGGAGCACCACAAGGAGGGGATTGTGGATAAGATCAAGGACAAGATCCACGGCGACGGACACGACCACGACCACAAAGGCGAGG
AGAAGAAGAAGAAGAAGGAGAAGAAGAAGAAGGAGGGCGAGCACAACCACGGCGGCCACAGCAGCAGCGACAGCGATAGCGAC
Protein sequenceShow/hide protein sequence
MSGFIEKIEEKLHIGGGHKGDEHHKSGDHHKGDDHHKSGEHGAKAGEHHKEGIVDKIKDKIHGDGHDHDHKGEEKKKKKEKKKKEGEHNHGGHSSSDSDSD