CuGenDBv2

Gene ID	MS023840
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	A2L_zn_ribbon domain-containing protein
Genome location	scaffold368:50007..50713
RNA-Seq Expression	MS023840
Synteny	MS023840
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_008449071.1 PREDICTED: uncharacterized protein LOC103491051 [Cucumis melo]

4.5e-35

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Query:  NSIPNRRPKTTIAAINDAASQQLVADPSQLQITWQIAVGAIAGVTPFVVAGIEFTKRIVAQQRCEECGGSGLVLMEDDYFRCPQCGGFLPWQSWKRFFWG
        NS+ NRR     AAI+ A+S  L AD +Q++ITWQI VGAIAGVTPFVVAGIEF+KRI+AQ+RC+ECGGSGLVL +DDYFRCP CGGFLPWQSW+RFFWG
Subjt:  NSIPNRRPKTTIAAINDAASQQLVADPSQLQITWQIAVGAIAGVTPFVVAGIEFTKRIVAQQRCEECGGSGLVLMEDDYFRCPQCGGFLPWQSWKRFFWG

XP_022154992.1 uncharacterized protein LOC111022135 [Momordica charantia]

1.2e-48

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Query:  NSIPNRRPKTTIAAINDAASQQLVADPSQLQITWQIAVGAIAGVTPFVVAGIEFTKRIVAQQRCEECGGSGLVLMEDDYFRCPQCGGFLPWQSWKRFFWG
        NSIPNRRPKTTIAAINDAASQQ  ADPSQLQITWQIAVGAIAGVTPFVVAGIEFTKRIVAQQRCEECGGSGLVLMEDDYFRCPQCGGFLPWQSWKRFFWG
Subjt:  NSIPNRRPKTTIAAINDAASQQLVADPSQLQITWQIAVGAIAGVTPFVVAGIEFTKRIVAQQRCEECGGSGLVLMEDDYFRCPQCGGFLPWQSWKRFFWG

XP_022935718.1 uncharacterized protein LOC111442262 [Cucurbita moschata]

4.5e-35

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Query:  NSIPNRRPKTTIAAINDAASQQLVADPSQLQITWQIAVGAIAGVTPFVVAGIEFTKRIVAQQRCEECGGSGLVLMEDDYFRCPQCGGFLPWQSWKRFFWG
        NS+  RR   T AAI+ A+     ADP+Q++ITWQI VGAIAGVTPFVVAGIEF+KRIVAQ+RC+ECGGSGLVLM+ DYFRCP+CGGFLPWQSW+RFF G
Subjt:  NSIPNRRPKTTIAAINDAASQQLVADPSQLQITWQIAVGAIAGVTPFVVAGIEFTKRIVAQQRCEECGGSGLVLMEDDYFRCPQCGGFLPWQSWKRFFWG

XP_023005598.1 uncharacterized protein LOC111498537 [Cucurbita maxima]

4.5e-35

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Query:  NSIPNRRPKTTIAAINDAASQQLVADPSQLQITWQIAVGAIAGVTPFVVAGIEFTKRIVAQQRCEECGGSGLVLMEDDYFRCPQCGGFLPWQSWKRFFWG
        NS+  RR   T AAI+ A+     ADP+Q++ITWQI VGAIAGVTPFVVAGIEF+KRIVAQ+RC+ECGGSGLVLM+ DYFRCP+CGGFLPWQSW+RFF G
Subjt:  NSIPNRRPKTTIAAINDAASQQLVADPSQLQITWQIAVGAIAGVTPFVVAGIEFTKRIVAQQRCEECGGSGLVLMEDDYFRCPQCGGFLPWQSWKRFFWG

XP_038903334.1 uncharacterized protein LOC120089955 [Benincasa hispida]

2.0e-35

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Query:  NSIPNRRPKTTIAAINDAASQQLVADPSQLQITWQIAVGAIAGVTPFVVAGIEFTKRIVAQQRCEECGGSGLVLMEDDYFRCPQCGGFLPWQSWKRFFWG
        NSI NRR   T AAI+ A+   L AD  Q++ITWQI VGAIAGVTPFVVAGIEF+KRI+AQ+RC+ECGGSGLVL +DDYFRCP+CGGFLPWQSW+RFFWG
Subjt:  NSIPNRRPKTTIAAINDAASQQLVADPSQLQITWQIAVGAIAGVTPFVVAGIEFTKRIVAQQRCEECGGSGLVLMEDDYFRCPQCGGFLPWQSWKRFFWG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L7H1 Uncharacterized protein

1.8e-34

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Query:  NSIPNRRPKTTIAAINDAASQQLVADPSQLQITWQIAVGAIAGVTPFVVAGIEFTKRIVAQQRCEECGGSGLVLMEDDYFRCPQCGGFLPWQSWKRFFWG
        NSI NRR     AAI+ A+   L AD +Q+QITWQI VGAIAGVTPFVVAGIEF+KRI  Q+RC+ECGGSGLVL +DDYFRCP+CGGFLPWQSW+RFFWG
Subjt:  NSIPNRRPKTTIAAINDAASQQLVADPSQLQITWQIAVGAIAGVTPFVVAGIEFTKRIVAQQRCEECGGSGLVLMEDDYFRCPQCGGFLPWQSWKRFFWG

A0A1S3BLU9 uncharacterized protein LOC103491051

2.2e-35

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Query:  NSIPNRRPKTTIAAINDAASQQLVADPSQLQITWQIAVGAIAGVTPFVVAGIEFTKRIVAQQRCEECGGSGLVLMEDDYFRCPQCGGFLPWQSWKRFFWG
        NS+ NRR     AAI+ A+S  L AD +Q++ITWQI VGAIAGVTPFVVAGIEF+KRI+AQ+RC+ECGGSGLVL +DDYFRCP CGGFLPWQSW+RFFWG
Subjt:  NSIPNRRPKTTIAAINDAASQQLVADPSQLQITWQIAVGAIAGVTPFVVAGIEFTKRIVAQQRCEECGGSGLVLMEDDYFRCPQCGGFLPWQSWKRFFWG

A0A6J1DN65 uncharacterized protein LOC111022135

5.9e-49

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Query:  NSIPNRRPKTTIAAINDAASQQLVADPSQLQITWQIAVGAIAGVTPFVVAGIEFTKRIVAQQRCEECGGSGLVLMEDDYFRCPQCGGFLPWQSWKRFFWG
        NSIPNRRPKTTIAAINDAASQQ  ADPSQLQITWQIAVGAIAGVTPFVVAGIEFTKRIVAQQRCEECGGSGLVLMEDDYFRCPQCGGFLPWQSWKRFFWG
Subjt:  NSIPNRRPKTTIAAINDAASQQLVADPSQLQITWQIAVGAIAGVTPFVVAGIEFTKRIVAQQRCEECGGSGLVLMEDDYFRCPQCGGFLPWQSWKRFFWG

A0A6J1FBA7 uncharacterized protein LOC111442262

2.2e-35

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Query:  NSIPNRRPKTTIAAINDAASQQLVADPSQLQITWQIAVGAIAGVTPFVVAGIEFTKRIVAQQRCEECGGSGLVLMEDDYFRCPQCGGFLPWQSWKRFFWG
        NS+  RR   T AAI+ A+     ADP+Q++ITWQI VGAIAGVTPFVVAGIEF+KRIVAQ+RC+ECGGSGLVLM+ DYFRCP+CGGFLPWQSW+RFF G
Subjt:  NSIPNRRPKTTIAAINDAASQQLVADPSQLQITWQIAVGAIAGVTPFVVAGIEFTKRIVAQQRCEECGGSGLVLMEDDYFRCPQCGGFLPWQSWKRFFWG

A0A6J1L2M2 uncharacterized protein LOC111498537

2.2e-35

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Query:  NSIPNRRPKTTIAAINDAASQQLVADPSQLQITWQIAVGAIAGVTPFVVAGIEFTKRIVAQQRCEECGGSGLVLMEDDYFRCPQCGGFLPWQSWKRFFWG
        NS+  RR   T AAI+ A+     ADP+Q++ITWQI VGAIAGVTPFVVAGIEF+KRIVAQ+RC+ECGGSGLVLM+ DYFRCP+CGGFLPWQSW+RFF G
Subjt:  NSIPNRRPKTTIAAINDAASQQLVADPSQLQITWQIAVGAIAGVTPFVVAGIEFTKRIVAQQRCEECGGSGLVLMEDDYFRCPQCGGFLPWQSWKRFFWG

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G55570.1 unknown protein

8.5e-32

62.63

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Query:  SIPNRRPKTTIAAINDAASQQLVADPSQLQITWQIAVGAIAGVTPFVVAGIEFTKRIVAQQRCEECGGSGLVLMEDDYFRCPQCGGFLPWQSWKRFFWG
        ++ NRR KTT +A+++ A    VA+  + +ITWQI VG IAG+ PFVVAG+EF+KRI+AQ+RCEECGG+GLV  +  YFRCP+CGGFLPWQSW+RFF G
Subjt:  SIPNRRPKTTIAAINDAASQQLVADPSQLQITWQIAVGAIAGVTPFVVAGIEFTKRIVAQQRCEECGGSGLVLMEDDYFRCPQCGGFLPWQSWKRFFWG

Sequences

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CDS sequence

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AATTCGATCCCAAATCGGAGACCAAAAACCACGATTGCCGCCATAAACGACGCCGCTTCGCAGCAGCTTGTAGCTGATCCCTCCCAACTCCAGATTACTTGGCAAATAGC
CGTCGGCGCCATTGCTGGAGTAACCCCGTTTGTGGTGGCCGGAATTGAGTTCACCAAGAGAATTGTGGCACAGCAAAGATGTGAAGAATGTGGAGGTTCGGGGCTTGTTC
TTATGGAGGACGACTACTTCCGTTGCCCACAATGCGGTGGGTTTTTGCCTTGGCAGTCATGGAAGCGATTCTTTTGGGGC

mRNA sequence

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Protein sequence

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NSIPNRRPKTTIAAINDAASQQLVADPSQLQITWQIAVGAIAGVTPFVVAGIEFTKRIVAQQRCEECGGSGLVLMEDDYFRCPQCGGFLPWQSWKRFFWG

MS023840 (gene) of Bitter gourd (TR) v1 genome