; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS023850 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS023850
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionPSI-G
Genome locationscaffold368:236305..236769
RNA-Seq ExpressionMS023850
SyntenyMS023850
Gene Ontology termsGO:0015979 - photosynthesis (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR000549 - Photosystem I PsaG/PsaK protein
IPR016370 - Photosystem I PsaG/PsaK, plant
IPR017494 - Photosystem I PsaG, plant
IPR023618 - Photosystem I PsaG/PsaK domain, chloroplastic


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004149569.1 photosystem I reaction center subunit V, chloroplastic [Cucumis sativus]4.2e-5680.62Show/hide
Query:  MAAAAASSAVFASPALSARAPSNMK-----SFQGLRPLPAVKSSGRLTAAVKSRRSTAVRAELNPSLVISLSTGMSLFLGRFVFFNFQRENVSKQGLPEQ
        MAAAA+SSAVFA+P  SA A          SFQGLR LP+VKSS R   A KSRRS  V+AELNPSLVISLSTG+SLFLGRFVFFNFQRENV KQ +PEQ
Subjt:  MAAAAASSAVFASPALSARAPSNMK-----SFQGLRPLPAVKSSGRLTAAVKSRRSTAVRAELNPSLVISLSTGMSLFLGRFVFFNFQRENVSKQGLPEQ

Query:  NGQSHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
        NG +HFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Subjt:  NGQSHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF

XP_022158865.1 photosystem I reaction center subunit V, chloroplastic [Momordica charantia]6.5e-7398.04Show/hide
Query:  AAAASSAVFASPALSARAPSNMKSFQGLRPLPAVKSSGRLTAAVKSRRSTAVRAELNPSLVISLSTGMSLFLGRFVFFNFQRENVSKQGLPEQNGQSHFE
        A A SSAVFASPALSARAPSNMKSFQGLRPLPAVKSSGRLTAAVKSRRSTAVRAELNPSLVISLSTGMSLFLGRFVFFNFQRENVSKQGLPEQNGQ HFE
Subjt:  AAAASSAVFASPALSARAPSNMKSFQGLRPLPAVKSSGRLTAAVKSRRSTAVRAELNPSLVISLSTGMSLFLGRFVFFNFQRENVSKQGLPEQNGQSHFE

Query:  AGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
        AGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Subjt:  AGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF

XP_022934047.1 photosystem I reaction center subunit V, chloroplastic-like [Cucurbita moschata]3.6e-5579.5Show/hide
Query:  MAAAAASSAVFASPALSARA------PSNMKSFQGLRPLPAVKSSGRLTAAVKSRRSTAVRAELNPSLVISLSTGMSLFLGRFVFFNFQRENVSKQGLPE
        MAAAA+SSAVFA+ + SA        PS + S+QGLRPLP +KSS R  A VKS RS  V+AELNPS+VISLSTG+SLFLGRFVFFNFQRENVSKQ +PE
Subjt:  MAAAAASSAVFASPALSARA------PSNMKSFQGLRPLPAVKSSGRLTAAVKSRRSTAVRAELNPSLVISLSTGMSLFLGRFVFFNFQRENVSKQGLPE

Query:  QNGQSHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
        QNG +HFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Subjt:  QNGQSHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF

XP_023005588.1 photosystem I reaction center subunit V, chloroplastic-like [Cucurbita maxima]4.7e-5579.5Show/hide
Query:  MAAAAASSAVFASPALSARA------PSNMKSFQGLRPLPAVKSSGRLTAAVKSRRSTAVRAELNPSLVISLSTGMSLFLGRFVFFNFQRENVSKQGLPE
        MAA A+SSAVFA+ + SA        PS + S+QGLRPLP +KSS R  AAVKS RS  V+AELNPS+VISLSTG+SLFLGRFVFFNFQRENVSKQ +PE
Subjt:  MAAAAASSAVFASPALSARA------PSNMKSFQGLRPLPAVKSSGRLTAAVKSRRSTAVRAELNPSLVISLSTGMSLFLGRFVFFNFQRENVSKQGLPE

Query:  QNGQSHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
        QNG +HFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Subjt:  QNGQSHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF

XP_038903014.1 photosystem I reaction center subunit V, chloroplastic [Benincasa hispida]4.2e-5680Show/hide
Query:  MAAAAASSAVFASPALSARAPSNMK-----SFQGLRPLPAVKSSGRLTAAVKSRRSTAVRAELNPSLVISLSTGMSLFLGRFVFFNFQRENVSKQGLPEQ
        MA AA+SSA+FA+P  SA A          SFQGLR LP+VKSS R   A+KSRRS  V+AELNPSLVISLSTG+SLFLGRFVFFNFQRENVSKQ +PEQ
Subjt:  MAAAAASSAVFASPALSARAPSNMK-----SFQGLRPLPAVKSSGRLTAAVKSRRSTAVRAELNPSLVISLSTGMSLFLGRFVFFNFQRENVSKQGLPEQ

Query:  NGQSHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
        NG +HFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Subjt:  NGQSHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF

TrEMBL top hitse value%identityAlignment
A0A0A0L4W3 PSI-G2.0e-5680.62Show/hide
Query:  MAAAAASSAVFASPALSARAPSNMK-----SFQGLRPLPAVKSSGRLTAAVKSRRSTAVRAELNPSLVISLSTGMSLFLGRFVFFNFQRENVSKQGLPEQ
        MAAAA+SSAVFA+P  SA A          SFQGLR LP+VKSS R   A KSRRS  V+AELNPSLVISLSTG+SLFLGRFVFFNFQRENV KQ +PEQ
Subjt:  MAAAAASSAVFASPALSARAPSNMK-----SFQGLRPLPAVKSSGRLTAAVKSRRSTAVRAELNPSLVISLSTGMSLFLGRFVFFNFQRENVSKQGLPEQ

Query:  NGQSHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
        NG +HFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Subjt:  NGQSHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF

A0A5D3CPR0 PSI-G3.8e-5579.75Show/hide
Query:  AAAASSAVFASPALSARAPSNMK-----SFQGLRPLPAVKSSGRLTAAVKSRRSTAVRAELNPSLVISLSTGMSLFLGRFVFFNFQRENVSKQGLPEQNG
        AAA+SSAVF +P  SA A          SFQGLR LP+VKSS R   A K+RRS  V+AELNPSLVISLSTG+SLFLGRFVFFNFQRENVSKQ +PEQNG
Subjt:  AAAASSAVFASPALSARAPSNMK-----SFQGLRPLPAVKSSGRLTAAVKSRRSTAVRAELNPSLVISLSTGMSLFLGRFVFFNFQRENVSKQGLPEQNG

Query:  QSHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
         +HFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Subjt:  QSHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF

A0A6J1DX19 PSI-G3.1e-7398.04Show/hide
Query:  AAAASSAVFASPALSARAPSNMKSFQGLRPLPAVKSSGRLTAAVKSRRSTAVRAELNPSLVISLSTGMSLFLGRFVFFNFQRENVSKQGLPEQNGQSHFE
        A A SSAVFASPALSARAPSNMKSFQGLRPLPAVKSSGRLTAAVKSRRSTAVRAELNPSLVISLSTGMSLFLGRFVFFNFQRENVSKQGLPEQNGQ HFE
Subjt:  AAAASSAVFASPALSARAPSNMKSFQGLRPLPAVKSSGRLTAAVKSRRSTAVRAELNPSLVISLSTGMSLFLGRFVFFNFQRENVSKQGLPEQNGQSHFE

Query:  AGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
        AGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Subjt:  AGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF

A0A6J1F1K2 PSI-G1.7e-5579.5Show/hide
Query:  MAAAAASSAVFASPALSARA------PSNMKSFQGLRPLPAVKSSGRLTAAVKSRRSTAVRAELNPSLVISLSTGMSLFLGRFVFFNFQRENVSKQGLPE
        MAAAA+SSAVFA+ + SA        PS + S+QGLRPLP +KSS R  A VKS RS  V+AELNPS+VISLSTG+SLFLGRFVFFNFQRENVSKQ +PE
Subjt:  MAAAAASSAVFASPALSARA------PSNMKSFQGLRPLPAVKSSGRLTAAVKSRRSTAVRAELNPSLVISLSTGMSLFLGRFVFFNFQRENVSKQGLPE

Query:  QNGQSHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
        QNG +HFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Subjt:  QNGQSHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF

A0A6J1L2L3 PSI-G2.3e-5579.5Show/hide
Query:  MAAAAASSAVFASPALSARA------PSNMKSFQGLRPLPAVKSSGRLTAAVKSRRSTAVRAELNPSLVISLSTGMSLFLGRFVFFNFQRENVSKQGLPE
        MAA A+SSAVFA+ + SA        PS + S+QGLRPLP +KSS R  AAVKS RS  V+AELNPS+VISLSTG+SLFLGRFVFFNFQRENVSKQ +PE
Subjt:  MAAAAASSAVFASPALSARA------PSNMKSFQGLRPLPAVKSSGRLTAAVKSRRSTAVRAELNPSLVISLSTGMSLFLGRFVFFNFQRENVSKQGLPE

Query:  QNGQSHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
        QNG +HFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Subjt:  QNGQSHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF

SwissProt top hitse value%identityAlignment
P12357 Photosystem I reaction center subunit V, chloroplastic2.0e-4866.67Show/hide
Query:  MAAAAASSAVFASPALSARAPS----------NMKSFQGLRPLPAVKSSGRLTAAV---KSRRSTAVRAELNPSLVISLSTGMSLFLGRFVFFNFQRENV
        MAAA AS +       S++ P             KSF GLRPL    SS   ++++    +RRS   RAEL+PSLVISLSTG+SLFLGRFVFFNFQREN+
Subjt:  MAAAAASSAVFASPALSARAPS----------NMKSFQGLRPLPAVKSSGRLTAAV---KSRRSTAVRAELNPSLVISLSTGMSLFLGRFVFFNFQRENV

Query:  SKQGLPEQNGQSHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
        +KQ +PEQNG SHFEAGD RAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILAT+SNGYDP FF
Subjt:  SKQGLPEQNGQSHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF

P14224 Photosystem I reaction center subunit V, chloroplastic2.1e-1336.07Show/hide
Query:  QGLRPLPAVKSSGRLTAAVKSRRSTAVRAELNPSLVISLSTGMSLFLGRFVFFNFQRE--NVSKQGLPEQNGQSHFEAGDVRAKEYVSLLKSNDPVGFNI
        Q L   P++++S R+      R +   +A L+P +VIS ST   L +GRFVF  +QR   N      P+  G ++F+  D++     ++  +NDP GFNI
Subjt:  QGLRPLPAVKSSGRLTAAVKSRRSTAVRAELNPSLVISLSTGMSLFLGRFVFFNFQRE--NVSKQGLPEQNGQSHFEAGDVRAKEYVSLLKSNDPVGFNI

Query:  VDVLAWGSIGHIVAYYILATSS
        +DV  WG++GH V + +LA +S
Subjt:  VDVLAWGSIGHIVAYYILATSS

Q00327 Photosystem I reaction center subunit V, chloroplastic1.5e-4362.18Show/hide
Query:  AAASSAVFASPALS----ARAPSNMKSFQGLRPLPAVKSSGRLTAAVKSRRSTAVRAELNPSLVISLSTGMSLFLGRFVFFNFQRENVSKQGLPEQNGQS
        A +++AV + PA++    A +P    SF+G+ P               +RRS A RA L PS+VISLSTG+SL +GRFVFFNFQRENV+KQ +PEQNG++
Subjt:  AAASSAVFASPALS----ARAPSNMKSFQGLRPLPAVKSSGRLTAAVKSRRSTAVRAELNPSLVISLSTGMSLFLGRFVFFNFQRENVSKQGLPEQNGQS

Query:  HFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
        HFEAGD RAKE+  +LKSNDPVGFN+VDVLAWGSIGHIVAYYILAT+SNGYDP FF
Subjt:  HFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF

Q9S7N7 Photosystem I reaction center subunit V, chloroplastic7.2e-5170.7Show/hide
Query:  AAAAASSAVFASPALSARAPSNMKSFQGLRPLPAVKSSG---RLTAAVKSRRSTAVRAELNPSLVISLSTGMSLFLGRFVFFNFQRENVSKQGLPEQNGQ
        +A+A  S    S A+S + P+++ SF GLRPL    SS    +L+   +   S  VRAEL+PS+VISLSTG+SLFLGRFVFFNFQRENV+KQGLPEQNG+
Subjt:  AAAAASSAVFASPALSARAPSNMKSFQGLRPLPAVKSSG---RLTAAVKSRRSTAVRAELNPSLVISLSTGMSLFLGRFVFFNFQRENVSKQGLPEQNGQ

Query:  SHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
        +HFEAGD RAKEYVSLLKSNDP+GFNIVDVLAWGSIGHIVAYYILATSSNGYDP FF
Subjt:  SHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF

Q9SPM4 Photosystem I reaction center subunit V, chloroplastic4.6e-2149.09Show/hide
Query:  LTAAVKSRRSTAVRAELNPSLVISLSTGMSLFLGRFVFFNFQRENVSKQGLPEQNGQSHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYY
        +TA  KS          N S +IS ST   L LGRFVF  FQR  VS+ GLPEQNG           + + S+LK+NDP GF +VDVLAWG++GH V ++
Subjt:  LTAAVKSRRSTAVRAELNPSLVISLSTGMSLFLGRFVFFNFQRENVSKQGLPEQNGQSHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYY

Query:  ILATSSNGYD
        ILAT++NGY+
Subjt:  ILATSSNGYD

Arabidopsis top hitse value%identityAlignment
AT1G55670.1 photosystem I subunit G5.1e-5270.7Show/hide
Query:  AAAAASSAVFASPALSARAPSNMKSFQGLRPLPAVKSSG---RLTAAVKSRRSTAVRAELNPSLVISLSTGMSLFLGRFVFFNFQRENVSKQGLPEQNGQ
        +A+A  S    S A+S + P+++ SF GLRPL    SS    +L+   +   S  VRAEL+PS+VISLSTG+SLFLGRFVFFNFQRENV+KQGLPEQNG+
Subjt:  AAAAASSAVFASPALSARAPSNMKSFQGLRPLPAVKSSG---RLTAAVKSRRSTAVRAELNPSLVISLSTGMSLFLGRFVFFNFQRENVSKQGLPEQNGQ

Query:  SHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
        +HFEAGD RAKEYVSLLKSNDP+GFNIVDVLAWGSIGHIVAYYILATSSNGYDP FF
Subjt:  SHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGCCGCCGCCGCCTCTTCCGCCGTGTTCGCCTCCCCAGCGCTCTCCGCGCGCGCCCCCTCCAACATGAAATCCTTCCAAGGCCTCCGCCCGCTCCCGGCTGTGAA
ATCGAGCGGCCGCCTCACAGCCGCCGTGAAGAGCCGGAGATCCACCGCGGTGAGGGCGGAGCTGAACCCGTCTCTGGTGATAAGCCTGAGCACAGGGATGTCCCTGTTTC
TGGGGAGGTTCGTATTCTTCAACTTCCAGAGGGAGAACGTCAGCAAACAGGGGCTGCCCGAGCAGAACGGGCAGAGCCATTTCGAGGCAGGGGATGTAAGGGCCAAGGAG
TACGTCAGCCTCCTCAAATCTAACGACCCAGTTGGGTTCAATATCGTGGACGTTCTGGCCTGGGGATCCATTGGTCACATCGTGGCTTACTACATCTTGGCCACGTCAAG
CAATGGCTACGATCCCAAGTTCTTC
mRNA sequenceShow/hide mRNA sequence
ATGGCCGCCGCCGCCGCCTCTTCCGCCGTGTTCGCCTCCCCAGCGCTCTCCGCGCGCGCCCCCTCCAACATGAAATCCTTCCAAGGCCTCCGCCCGCTCCCGGCTGTGAA
ATCGAGCGGCCGCCTCACAGCCGCCGTGAAGAGCCGGAGATCCACCGCGGTGAGGGCGGAGCTGAACCCGTCTCTGGTGATAAGCCTGAGCACAGGGATGTCCCTGTTTC
TGGGGAGGTTCGTATTCTTCAACTTCCAGAGGGAGAACGTCAGCAAACAGGGGCTGCCCGAGCAGAACGGGCAGAGCCATTTCGAGGCAGGGGATGTAAGGGCCAAGGAG
TACGTCAGCCTCCTCAAATCTAACGACCCAGTTGGGTTCAATATCGTGGACGTTCTGGCCTGGGGATCCATTGGTCACATCGTGGCTTACTACATCTTGGCCACGTCAAG
CAATGGCTACGATCCCAAGTTCTTC
Protein sequenceShow/hide protein sequence
MAAAAASSAVFASPALSARAPSNMKSFQGLRPLPAVKSSGRLTAAVKSRRSTAVRAELNPSLVISLSTGMSLFLGRFVFFNFQRENVSKQGLPEQNGQSHFEAGDVRAKE
YVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF